RNA–Protein interactions for RNA: ENST00000468384.1

HMGB1-207, Transcript of high mobility group box 1, humanhuman

TSL 1 (best)

Gene HMGB1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-207ENST00000468384 OR2AE1Q8NHA4 323 aa3.1□□□□□ -1.91
HMGB1-207ENST00000468384 FNDC8Q8TC99 324 aa3.1□□□□□ -1.91
HMGB1-207ENST00000468384 PPCDCQ96CD2 204 aa3.1□□□□□ -1.91
HMGB1-207ENST00000468384 ZNF251Q9BRH9 671 aa3.1□□□□□ -1.91
HMGB1-207ENST00000468384 HDHD2Q9H0R4 259 aa3.1□□□□□ -1.91
HMGB1-207ENST00000468384 PARLQ9H300 379 aa3.1□□□□□ -1.91
HMGB1-207ENST00000468384 SLC2A9Q9NRM0 540 aa3.1□□□□□ -1.91
HMGB1-207ENST00000468384 CLEC5AQ9NY25 188 aa3.1□□□□□ -1.91
HMGB1-207ENST00000468384 GMPPBQ9Y5P6 360 aa3.1□□□□□ -1.91
HMGB1-207ENST00000468384 A0A0D9SG52 128 aa3.09□□□□□ -1.91
HMGB1-207ENST00000468384 TMEM189A5PLL7 270 aa3.09□□□□□ -1.91
HMGB1-207ENST00000468384 HSD17B6O14756 317 aa3.09□□□□□ -1.91
HMGB1-207ENST00000468384 RER1O15258 196 aa3.09□□□□□ -1.91
HMGB1-207ENST00000468384 ZNF324O75467 553 aaPredicted RBP3.09□□□□□ -1.91
HMGB1-207ENST00000468384 TMEM50AO95807 157 aa3.09□□□□□ -1.91
HMGB1-207ENST00000468384 BCHEP06276 602 aa3.09□□□□□ -1.91
HMGB1-207ENST00000468384 H2BFMP0C1H6 154 aa3.09□□□□□ -1.91
HMGB1-207ENST00000468384 ACSM4P0C7M7 580 aa3.09□□□□□ -1.91
HMGB1-207ENST00000468384 DCKP27707 260 aa3.09□□□□□ -1.91
HMGB1-207ENST00000468384 GNRHRP30968 328 aa3.09□□□□□ -1.91
HMGB1-207ENST00000468384 NDUFV3P56181 108 aaKnown RBP3.09□□□□□ -1.91
HMGB1-207ENST00000468384 KRTAP10-12P60413 245 aa3.09□□□□□ -1.91
HMGB1-207ENST00000468384 RPL8P62917 257 aaKnown RBP3.09□□□□□ -1.91
HMGB1-207ENST00000468384 RPL36AP83881 106 aaKnown RBP3.09□□□□□ -1.91
HMGB1-207ENST00000468384 ZNF816Q0VGE8 651 aaPredicted RBP3.09□□□□□ -1.91
HMGB1-207ENST00000468384 AQP6Q13520 282 aa3.09□□□□□ -1.91
HMGB1-207ENST00000468384 INSL4Q14641 139 aa3.09□□□□□ -1.91
HMGB1-207ENST00000468384 ZNF146Q15072 292 aa3.09□□□□□ -1.91
HMGB1-207ENST00000468384 MMDQ15546 238 aa3.09□□□□□ -1.91
HMGB1-207ENST00000468384 SMIM21Q3B7S5 101 aa3.09□□□□□ -1.91
HMGB1-207ENST00000468384 TIGITQ495A1 244 aa3.09□□□□□ -1.91
HMGB1-207ENST00000468384 TRAPPC6BQ86SZ2 158 aa3.09□□□□□ -1.91
HMGB1-207ENST00000468384 PPP1R27Q86WC6 154 aa3.09□□□□□ -1.91
HMGB1-207ENST00000468384 C1orf158Q8N1D5 194 aa3.09□□□□□ -1.91
HMGB1-207ENST00000468384 CSNK1G2-AS1Q8NCQ2 148 aa3.09□□□□□ -1.91
HMGB1-207ENST00000468384 OR52I1Q8NGK6 324 aa3.09□□□□□ -1.91
HMGB1-207ENST00000468384 OR4A4PQ8NGN8 299 aa3.09□□□□□ -1.91
HMGB1-207ENST00000468384 OR52E5Q8NH55 327 aa3.09□□□□□ -1.91
HMGB1-207ENST00000468384 SFXN5Q8TD22 340 aa3.09□□□□□ -1.91
HMGB1-207ENST00000468384 MICU1Q9BPX6 476 aa3.09□□□□□ -1.91
HMGB1-207ENST00000468384 MOB1AQ9H8S9 216 aa3.09□□□□□ -1.91
HMGB1-207ENST00000468384 C12orf10Q9HB07 376 aa3.09□□□□□ -1.91
HMGB1-207ENST00000468384 NMRAL1Q9HBL8 299 aa3.09□□□□□ -1.91
HMGB1-207ENST00000468384 RASL12Q9NYN1 266 aa3.09□□□□□ -1.91
HMGB1-207ENST00000468384 IFNKQ9P0W0 207 aa3.09□□□□□ -1.91
HMGB1-207ENST00000468384 POLR3HQ9Y535 204 aaPredicted RBP3.09□□□□□ -1.91
HMGB1-207ENST00000468384 PEX16Q9Y5Y5 336 aa3.09□□□□□ -1.91
HMGB1-207ENST00000468384 S4R3C0 116 aa3.09□□□□□ -1.91
HMGB1-207ENST00000468384 TRBV7-9A0A0J9YWB2 115 aa3.08□□□□□ -1.92
HMGB1-207ENST00000468384 KBTBD11-OT1A0A1B0GTJ5 212 aa3.08□□□□□ -1.92
HMGB1-207ENST00000468384 TMEM210A6NLX4 147 aa3.08□□□□□ -1.92
HMGB1-207ENST00000468384 H3BUA1 57 aa3.08□□□□□ -1.92
HMGB1-207ENST00000468384 PSCAO43653 123 aa3.08□□□□□ -1.92
HMGB1-207ENST00000468384 MRPS14O60783 128 aaKnown RBP3.08□□□□□ -1.92
HMGB1-207ENST00000468384 ZNF737O75373 536 aa3.08□□□□□ -1.92
HMGB1-207ENST00000468384 ATP5LO75964 103 aa3.08□□□□□ -1.92
HMGB1-207ENST00000468384 OR5F1O95221 314 aa3.08□□□□□ -1.92
HMGB1-207ENST00000468384 IGHV3-7P01780 117 aa3.08□□□□□ -1.92
HMGB1-207ENST00000468384 MYL2P10916 166 aa3.08□□□□□ -1.92
HMGB1-207ENST00000468384 MLNP12872 115 aa3.08□□□□□ -1.92
HMGB1-207ENST00000468384 NR2C1P13056 603 aa3.08□□□□□ -1.92
HMGB1-207ENST00000468384 GCAP28676 217 aa3.08□□□□□ -1.92
HMGB1-207ENST00000468384 MAGEA2P43356 314 aa3.08□□□□□ -1.92
HMGB1-207ENST00000468384 KCNJ3P48549 501 aa3.08□□□□□ -1.92
HMGB1-207ENST00000468384 HBA1P69905 142 aa3.08□□□□□ -1.92
HMGB1-207ENST00000468384 SRPXP78539 464 aa3.08□□□□□ -1.92
HMGB1-207ENST00000468384 OTPQ5XKR4 325 aa3.08□□□□□ -1.92
HMGB1-207ENST00000468384 OR10K2Q6IF99 312 aa3.08□□□□□ -1.92
HMGB1-207ENST00000468384 UTS2BQ765I0 119 aa3.08□□□□□ -1.92
HMGB1-207ENST00000468384 HDDC2Q7Z4H3 204 aa3.08□□□□□ -1.92
HMGB1-207ENST00000468384 CEACAM19Q7Z692 300 aa3.08□□□□□ -1.92
HMGB1-207ENST00000468384 SLC35F2Q8IXU6 374 aa3.08□□□□□ -1.92
HMGB1-207ENST00000468384 C8orf31Q8N9H6 132 aa3.08□□□□□ -1.92
HMGB1-207ENST00000468384 Q8N9P0 234 aaPredicted RBP3.08□□□□□ -1.92
HMGB1-207ENST00000468384 LFNGQ8NES3 379 aa3.08□□□□□ -1.92
HMGB1-207ENST00000468384 OR10A7Q8NGE5 316 aa3.08□□□□□ -1.92
HMGB1-207ENST00000468384 RFESDQ8TAC1 157 aa3.08□□□□□ -1.92
HMGB1-207ENST00000468384 CDKL2Q92772 493 aa3.08□□□□□ -1.92
HMGB1-207ENST00000468384 FAM103A1Q9BTL3 118 aaKnown RBP3.08□□□□□ -1.92
HMGB1-207ENST00000468384 OR51I1Q9H343 314 aa3.08□□□□□ -1.92
HMGB1-207ENST00000468384 FAM206AQ9NX38 181 aa3.08□□□□□ -1.92
HMGB1-207ENST00000468384 MGAT4AQ9UM21 535 aa3.08□□□□□ -1.92
HMGB1-207ENST00000468384 IGKV2D-30A0A075B6S6 120 aa3.07□□□□□ -1.92
HMGB1-207ENST00000468384 A0A1B0GW15 77 aa3.07□□□□□ -1.92
HMGB1-207ENST00000468384 SYCE1LA8MT33 242 aa3.07□□□□□ -1.92
HMGB1-207ENST00000468384 F5H768 121 aa3.07□□□□□ -1.92
HMGB1-207ENST00000468384 LOC110117498-PIK3R3F6TDL0 507 aa3.07□□□□□ -1.92
HMGB1-207ENST00000468384 H3BMQ9 156 aa3.07□□□□□ -1.92
HMGB1-207ENST00000468384 RAB29O14966 203 aa3.07□□□□□ -1.92
HMGB1-207ENST00000468384 RGS16O15492 202 aaPredicted RBP3.07□□□□□ -1.92
HMGB1-207ENST00000468384 TSPAN13O95857 204 aa3.07□□□□□ -1.92
HMGB1-207ENST00000468384 HLA-AP01891 365 aaKnown RBP3.07□□□□□ -1.92
HMGB1-207ENST00000468384 DBIP07108 87 aaKnown RBP3.07□□□□□ -1.92
HMGB1-207ENST00000468384 CHTF8P0CG12 524 aa3.07□□□□□ -1.92
HMGB1-207ENST00000468384 CFC1P0CG37 223 aa3.07□□□□□ -1.92
HMGB1-207ENST00000468384 HSD17B1P14061 328 aa3.07□□□□□ -1.92
HMGB1-207ENST00000468384 MAS1LP35410 378 aa3.07□□□□□ -1.92
HMGB1-207ENST00000468384 DDOSTP39656 456 aa3.07□□□□□ -1.92
HMGB1-207ENST00000468384 UBE2G2P60604 165 aa3.07□□□□□ -1.92
HMGB1-207ENST00000468384 DAD1P61803 113 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms