RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 OR2D3Q8NGH3 330 aa12.92□□□□□ -0.34
CHD1L-205ENST00000467213 OR52L2PQ8NGH6 319 aa12.92□□□□□ -0.34
CHD1L-205ENST00000467213 GNB4Q9HAV0 340 aa12.92□□□□□ -0.34
CHD1L-205ENST00000467213 WDFY3Q8IZQ1 3526 aa12.92□□□□□ -0.34
CHD1L-205ENST00000467213 LAMA1P25391 3075 aa12.92□□□□□ -0.34
CHD1L-205ENST00000467213 LINC00473A8K010 186 aa12.92□□□□□ -0.34
CHD1L-205ENST00000467213 ISLRO14498 428 aa12.92□□□□□ -0.34
CHD1L-205ENST00000467213 PSPNO60542 156 aa12.92□□□□□ -0.34
CHD1L-205ENST00000467213 TOMM40O96008 361 aa12.92□□□□□ -0.34
CHD1L-205ENST00000467213 SP1P08047 785 aa12.92□□□□□ -0.34
CHD1L-205ENST00000467213 CHRNB4P30926 498 aa12.92□□□□□ -0.34
CHD1L-205ENST00000467213 DUTP33316 252 aaKnown RBP12.92□□□□□ -0.34
CHD1L-205ENST00000467213 CYB5R2Q6BCY4 276 aa12.92□□□□□ -0.34
CHD1L-205ENST00000467213 TMEM136Q6ZRR5 245 aa12.92□□□□□ -0.34
CHD1L-205ENST00000467213 PNKDQ8N490 385 aa12.92□□□□□ -0.34
CHD1L-205ENST00000467213 NRN1Q9NPD7 142 aa12.92□□□□□ -0.34
CHD1L-205ENST00000467213 TMEM167BQ9NRX6 74 aa12.92□□□□□ -0.34
CHD1L-205ENST00000467213 CFAP54Q96N23 3096 aa12.92□□□□□ -0.34
CHD1L-205ENST00000467213 RRHO14718 337 aa12.92□□□□□ -0.34
CHD1L-205ENST00000467213 SIAH2O43255 324 aa12.92□□□□□ -0.34
CHD1L-205ENST00000467213 GFRA3O60609 400 aa12.92□□□□□ -0.34
CHD1L-205ENST00000467213 PMCHL1Q16048 86 aa12.92□□□□□ -0.34
CHD1L-205ENST00000467213 WIPF2Q8TF74 440 aaPredicted RBP12.92□□□□□ -0.34
CHD1L-205ENST00000467213 MS4A5Q9H3V2 200 aa12.92□□□□□ -0.34
CHD1L-205ENST00000467213 CDC42EP3Q9UKI2 254 aa12.92□□□□□ -0.34
CHD1L-205ENST00000467213 OR9G9P0C7N8 305 aa12.91□□□□□ -0.34
CHD1L-205ENST00000467213 DEFA4P12838 97 aa12.91□□□□□ -0.34
CHD1L-205ENST00000467213 IER3P46695 156 aa12.91□□□□□ -0.34
CHD1L-205ENST00000467213 RAB31Q13636 194 aa12.91□□□□□ -0.34
CHD1L-205ENST00000467213 EFNB3Q15768 340 aa12.91□□□□□ -0.34
CHD1L-205ENST00000467213 ZNF808Q8N4W9 903 aaPredicted RBP12.91□□□□□ -0.34
CHD1L-205ENST00000467213 C19orf24Q9BVV8 132 aa12.91□□□□□ -0.34
CHD1L-205ENST00000467213 RBMXL2O75526 392 aaKnown RBP12.91□□□□□ -0.34
CHD1L-205ENST00000467213 SPATA45Q537H7 98 aa12.91□□□□□ -0.34
CHD1L-205ENST00000467213 C9orf135Q5VTT2 229 aa12.91□□□□□ -0.34
CHD1L-205ENST00000467213 DMRTA1Q5VZB9 504 aa12.91□□□□□ -0.34
CHD1L-205ENST00000467213 COQ2Q96H96 371 aa12.91□□□□□ -0.34
CHD1L-205ENST00000467213 TUBG2Q9NRH3 451 aa12.91□□□□□ -0.34
CHD1L-205ENST00000467213 TBL2Q9Y4P3 447 aaKnown RBP12.91□□□□□ -0.34
CHD1L-205ENST00000467213 A0A1W2PS18 150 aa12.9□□□□□ -0.34
CHD1L-205ENST00000467213 SMPD2O60906 423 aa12.9□□□□□ -0.34
CHD1L-205ENST00000467213 ZNF324O75467 553 aaPredicted RBP12.9□□□□□ -0.34
CHD1L-205ENST00000467213 DUSP3P51452 185 aaPredicted RBP12.9□□□□□ -0.34
CHD1L-205ENST00000467213 KLF3P57682 345 aaPredicted RBP12.9□□□□□ -0.34
CHD1L-205ENST00000467213 PRR20EP86478 221 aa12.9□□□□□ -0.34
CHD1L-205ENST00000467213 PRR20CP86479 221 aa12.9□□□□□ -0.34
CHD1L-205ENST00000467213 PRR20DP86480 221 aa12.9□□□□□ -0.34
CHD1L-205ENST00000467213 PRR20BP86481 221 aa12.9□□□□□ -0.34
CHD1L-205ENST00000467213 PRR20AP86496 221 aa12.9□□□□□ -0.34
CHD1L-205ENST00000467213 CR1LQ2VPA4 569 aa12.9□□□□□ -0.34
CHD1L-205ENST00000467213 LYSMD4Q5XG99 296 aa12.9□□□□□ -0.34
CHD1L-205ENST00000467213 C1orf159Q96HA4 380 aa12.9□□□□□ -0.34
CHD1L-205ENST00000467213 GAL3ST2Q9H3Q3 398 aa12.9□□□□□ -0.34
CHD1L-205ENST00000467213 DNAJC4Q9NNZ3 241 aa12.9□□□□□ -0.34
CHD1L-205ENST00000467213 IL19Q9UHD0 177 aa12.9□□□□□ -0.34
CHD1L-205ENST00000467213 LAMTOR2Q9Y2Q5 125 aa12.9□□□□□ -0.34
CHD1L-205ENST00000467213 DOCK11Q5JSL3 2073 aa12.9□□□□□ -0.34
CHD1L-205ENST00000467213 MED12LQ86YW9 2145 aa12.9□□□□□ -0.34
CHD1L-205ENST00000467213 SMIM27A0A1W2PRY6 76 aa12.9□□□□□ -0.34
CHD1L-205ENST00000467213 K7EP13 123 aa12.9□□□□□ -0.34
CHD1L-205ENST00000467213 ITGB1BP1O14713 200 aa12.9□□□□□ -0.34
CHD1L-205ENST00000467213 HYPMO75409 117 aa12.9□□□□□ -0.34
CHD1L-205ENST00000467213 AMY1AP04745 511 aa12.9□□□□□ -0.34
CHD1L-205ENST00000467213 ATP5IP56385 69 aaPredicted RBP12.9□□□□□ -0.34
CHD1L-205ENST00000467213 TEPPQ6URK8 271 aa12.9□□□□□ -0.34
CHD1L-205ENST00000467213 GCNT2Q8N0V5 402 aa12.9□□□□□ -0.34
CHD1L-205ENST00000467213 C11orf42Q8N5U0 333 aa12.9□□□□□ -0.34
CHD1L-205ENST00000467213 OR4A16Q8NH70 328 aa12.9□□□□□ -0.34
CHD1L-205ENST00000467213 FOXF2Q12947 444 aa12.89□□□□□ -0.35
CHD1L-205ENST00000467213 MIC13Q5XKP0 118 aa12.89□□□□□ -0.35
CHD1L-205ENST00000467213 ST6GALNAC3Q8NDV1 305 aa12.89□□□□□ -0.35
CHD1L-205ENST00000467213 STARD4Q96DR4 205 aa12.89□□□□□ -0.35
CHD1L-205ENST00000467213 CD33P20138 364 aa12.89□□□□□ -0.35
CHD1L-205ENST00000467213 PCP4P48539 62 aa12.89□□□□□ -0.35
CHD1L-205ENST00000467213 MDP1Q86V88 176 aa12.89□□□□□ -0.35
CHD1L-205ENST00000467213 UBALD1Q8TB05 177 aa12.89□□□□□ -0.35
CHD1L-205ENST00000467213 COMMD5Q9GZQ3 224 aa12.89□□□□□ -0.35
CHD1L-205ENST00000467213 C15orf65H3BRN8 121 aa12.88□□□□□ -0.35
CHD1L-205ENST00000467213 SLC17A3O00476 420 aa12.88□□□□□ -0.35
CHD1L-205ENST00000467213 GDF9O60383 454 aa12.88□□□□□ -0.35
CHD1L-205ENST00000467213 CCL4P13236 92 aa12.88□□□□□ -0.35
CHD1L-205ENST00000467213 THBS3P49746 956 aa12.88□□□□□ -0.35
CHD1L-205ENST00000467213 RELBQ01201 579 aa12.88□□□□□ -0.35
CHD1L-205ENST00000467213 CDX2Q99626 313 aaPredicted RBP12.88□□□□□ -0.35
CHD1L-205ENST00000467213 JPT1Q9UK76 154 aa12.88□□□□□ -0.35
CHD1L-205ENST00000467213 FREM1Q5H8C1 2179 aa12.88□□□□□ -0.35
CHD1L-205ENST00000467213 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.88□□□□□ -0.35
CHD1L-205ENST00000467213 SPINT2O43291 252 aa12.88□□□□□ -0.35
CHD1L-205ENST00000467213 NDUFB8O95169 186 aa12.88□□□□□ -0.35
CHD1L-205ENST00000467213 GNG4P50150 75 aa12.88□□□□□ -0.35
CHD1L-205ENST00000467213 ACP7Q6ZNF0 438 aa12.88□□□□□ -0.35
CHD1L-205ENST00000467213 HEYLQ9NQ87 328 aaPredicted RBP12.88□□□□□ -0.35
CHD1L-205ENST00000467213 NAT8BQ9UHF3 227 aa12.88□□□□□ -0.35
CHD1L-205ENST00000467213 SDK2Q58EX2 2172 aa12.88□□□□□ -0.35
CHD1L-205ENST00000467213 HELTA6NFD8 242 aa12.87□□□□□ -0.35
CHD1L-205ENST00000467213 DPRXA6NFQ7 191 aa12.87□□□□□ -0.35
CHD1L-205ENST00000467213 CXCL12P48061 93 aa12.87□□□□□ -0.35
CHD1L-205ENST00000467213 AMTP48728 403 aa12.87□□□□□ -0.35
CHD1L-205ENST00000467213 ERVK-16P61578 105 aa12.87□□□□□ -0.35
CHD1L-205ENST00000467213 PRAMEF5Q5TYX0 476 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms