RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 C4orf51C9J302 202 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 C1QTNF12Q5T7M4 302 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 GOLT1AQ6ZVE7 132 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 CRIPAKQ8N1N5 446 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 NUDT10Q8NFP7 164 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 CLDND2Q8NHS1 167 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 NUDT11Q96G61 164 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 HSPB9Q9BQS6 159 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 MRPL18Q9H0U6 180 aaKnown RBP7.43□□□□□ -1.22
HPS4-209ENST00000466781 TUBD1Q9UJT1 453 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 F11RQ9Y624 299 aaKnown RBP7.43□□□□□ -1.22
HPS4-209ENST00000466781 LCTP09848 1927 aa7.42□□□□□ -1.22
HPS4-209ENST00000466781 TGFAP01135 160 aa7.42□□□□□ -1.22
HPS4-209ENST00000466781 RPS11P62280 158 aaKnown RBP eCLIP7.42□□□□□ -1.22
HPS4-209ENST00000466781 C11orf91Q3C1V1 193 aa7.42□□□□□ -1.22
HPS4-209ENST00000466781 LINC00470Q9BZP3 86 aa7.42□□□□□ -1.22
HPS4-209ENST00000466781 KCNE5Q9UJ90 142 aa7.42□□□□□ -1.22
HPS4-209ENST00000466781 ZG16O60844 167 aa7.42□□□□□ -1.22
HPS4-209ENST00000466781 MOSP00540 346 aa7.42□□□□□ -1.22
HPS4-209ENST00000466781 GLIPR1P48060 266 aa7.42□□□□□ -1.22
HPS4-209ENST00000466781 TNFRSF9Q07011 255 aa7.42□□□□□ -1.22
HPS4-209ENST00000466781 UBE2V2Q15819 145 aa7.42□□□□□ -1.22
HPS4-209ENST00000466781 TIMM23BQ5SRD1 257 aa7.42□□□□□ -1.22
HPS4-209ENST00000466781 GTSCR1Q86UQ5 136 aa7.42□□□□□ -1.22
HPS4-209ENST00000466781 MIXL1Q9H2W2 232 aa7.42□□□□□ -1.22
HPS4-209ENST00000466781 SMDT1Q9H4I9 107 aa7.42□□□□□ -1.22
HPS4-209ENST00000466781 FBXL7Q9UJT9 491 aa7.42□□□□□ -1.22
HPS4-209ENST00000466781 GAGE10A6NGK3 116 aa7.42□□□□□ -1.22
HPS4-209ENST00000466781 TIAF1O95411 115 aa7.42□□□□□ -1.22
HPS4-209ENST00000466781 CXCL3P19876 107 aa7.42□□□□□ -1.22
HPS4-209ENST00000466781 NANOS3P60323 173 aaKnown RBP7.42□□□□□ -1.22
HPS4-209ENST00000466781 SAPCD1Q5SSQ6 148 aa7.42□□□□□ -1.22
HPS4-209ENST00000466781 LINC00305Q7Z4B0 112 aa7.42□□□□□ -1.22
HPS4-209ENST00000466781 VKORC1L1Q8N0U8 176 aa7.42□□□□□ -1.22
HPS4-209ENST00000466781 TMEM54Q969K7 222 aa7.42□□□□□ -1.22
HPS4-209ENST00000466781 SDF2L1Q9HCN8 221 aa7.42□□□□□ -1.22
HPS4-209ENST00000466781 IGHV3-35A0A0C4DH35 117 aa7.42□□□□□ -1.22
HPS4-209ENST00000466781 TMEM252Q8N6L7 170 aa7.42□□□□□ -1.22
HPS4-209ENST00000466781 ABHD17AQ96GS6 310 aa7.42□□□□□ -1.22
HPS4-209ENST00000466781 KCNK7Q9Y2U2 307 aa7.42□□□□□ -1.22
HPS4-209ENST00000466781 CD59P13987 128 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 MUC1P15941 1255 aaPredicted RBP7.41□□□□□ -1.22
HPS4-209ENST00000466781 RNASE4P34096 147 aaKnown RBP7.41□□□□□ -1.22
HPS4-209ENST00000466781 PMCHL1Q16048 86 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 CYP2G1PQ6ZSU1 146 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 FAM57AQ8TBR7 257 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 ARPC1AQ92747 370 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 SPSB4Q96A44 273 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 TRPM6Q9BX84 2022 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 TTC32Q5I0X7 151 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 Q6ZT83 130 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 OR10S1Q8NGN2 331 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 OR5AC2Q9NZP5 309 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 PDE4DIPQ5VU43 2346 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 IGHV3OR16-13A0A075B7E8 117 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 IGHV3-74A0A0B4J1X5 117 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 RECKO95980 971 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 CRPP02741 224 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 PLP1P60201 277 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 BSPH1Q075Z2 132 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 NSUN5P1Q3KNT7 163 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 TMEM170BQ5T4T1 132 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 PPP1R32Q7Z5V6 425 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 FAM131CQ96AQ9 280 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 METRNQ9UJH8 293 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 ARID1BQ8NFD5 2236 aaPredicted RBP7.41□□□□□ -1.22
HPS4-209ENST00000466781 LEPP41159 167 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 COLCA1Q6ZS62 124 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 SPACA3Q8IXA5 215 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 NPFFR1Q9GZQ6 430 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 TOMM7Q9P0U1 55 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 TCF19Q9Y242 345 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 IGHV3-49A0A0A0MS15 119 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 ZNF688P0C7X2 276 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 HKR1P10072 659 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 PAX1P15863 534 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 C9orf62Q8N4C0 152 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 NPIPB3Q92617 1050 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 PARLQ9H300 379 aa7.41□□□□□ -1.22
HPS4-209ENST00000466781 CRYBB3P26998 211 aa7.4□□□□□ -1.22
HPS4-209ENST00000466781 CLEC19AQ6UXS0 136 aa7.4□□□□□ -1.22
HPS4-209ENST00000466781 RFLNBQ8N5W9 214 aa7.4□□□□□ -1.22
HPS4-209ENST00000466781 ZNF703Q9H7S9 590 aaPredicted RBP7.4□□□□□ -1.22
HPS4-209ENST00000466781 G6PC2Q9NQR9 355 aa7.4□□□□□ -1.22
HPS4-209ENST00000466781 DPM3Q9P2X0 92 aa7.4□□□□□ -1.22
HPS4-209ENST00000466781 C19orf67A6NJJ6 358 aa7.4□□□□□ -1.22
HPS4-209ENST00000466781 M0R381 172 aa7.4□□□□□ -1.22
HPS4-209ENST00000466781 FOLR2P14207 255 aa7.4□□□□□ -1.22
HPS4-209ENST00000466781 MDKP21741 143 aaPredicted RBP7.4□□□□□ -1.22
HPS4-209ENST00000466781 CNTFRP26992 372 aa7.4□□□□□ -1.22
HPS4-209ENST00000466781 SAMD13Q5VXD3 122 aa7.4□□□□□ -1.22
HPS4-209ENST00000466781 TMEM91Q6ZNR0 172 aa7.4□□□□□ -1.22
HPS4-209ENST00000466781 TEX45Q8NA69 505 aa7.4□□□□□ -1.22
HPS4-209ENST00000466781 PMCHL2Q9BQD1 86 aa7.4□□□□□ -1.22
HPS4-209ENST00000466781 TCRBV4S1A1TA0A5B7 111 aa7.4□□□□□ -1.22
HPS4-209ENST00000466781 TM4SF5O14894 197 aa7.4□□□□□ -1.22
HPS4-209ENST00000466781 HSPB1P04792 205 aaKnown RBP7.4□□□□□ -1.22
HPS4-209ENST00000466781 SMIM6P0DI80 62 aa7.4□□□□□ -1.22
HPS4-209ENST00000466781 RIPPLY2Q5TAB7 128 aa7.4□□□□□ -1.22
HPS4-209ENST00000466781 UNQ6494/PRO21346Q6UXR6 183 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms