RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 GPX2P18283 190 aa1.21□□□□□ -2.22
LRCH3-211ENST00000466054 MAP3K7CLP57077 242 aa1.21□□□□□ -2.22
LRCH3-211ENST00000466054 POLR2GP62487 172 aaKnown RBP eCLIP1.21□□□□□ -2.22
LRCH3-211ENST00000466054 SLC36A2Q495M3 483 aa1.21□□□□□ -2.22
LRCH3-211ENST00000466054 SLC51BQ86UW2 128 aa1.21□□□□□ -2.22
LRCH3-211ENST00000466054 DYNAPQ8N1N2 210 aa1.21□□□□□ -2.22
LRCH3-211ENST00000466054 SLC22A24Q8N4F4 322 aa1.21□□□□□ -2.22
LRCH3-211ENST00000466054 OR51I2Q9H344 312 aa1.21□□□□□ -2.22
LRCH3-211ENST00000466054 GPR84Q9NQS5 396 aa1.21□□□□□ -2.22
LRCH3-211ENST00000466054 FKBP14Q9NWM8 211 aa1.21□□□□□ -2.22
LRCH3-211ENST00000466054 AK3Q9UIJ7 227 aa1.21□□□□□ -2.22
LRCH3-211ENST00000466054 PRELID1Q9Y255 219 aa1.21□□□□□ -2.22
LRCH3-211ENST00000466054 ABCC11Q96J66 1382 aa1.21□□□□□ -2.22
LRCH3-211ENST00000466054 HELZ2Q9BYK8 2649 aaKnown RBP1.2□□□□□ -2.22
LRCH3-211ENST00000466054 MYH11P35749 1972 aa1.2□□□□□ -2.22
LRCH3-211ENST00000466054 TRAV38-1A0A0B4J264 116 aa1.2□□□□□ -2.22
LRCH3-211ENST00000466054 IGHV1-69-2A0A0G2JMI3 117 aa1.2□□□□□ -2.22
LRCH3-211ENST00000466054 CIAO1O76071 339 aa1.2□□□□□ -2.22
LRCH3-211ENST00000466054 APOEP02649 317 aa1.2□□□□□ -2.22
LRCH3-211ENST00000466054 TYMSP04818 313 aa1.2□□□□□ -2.22
LRCH3-211ENST00000466054 LYNX1P0DP58 116 aa1.2□□□□□ -2.22
LRCH3-211ENST00000466054 RPL28P46779 137 aaKnown RBP1.2□□□□□ -2.22
LRCH3-211ENST00000466054 RAB14P61106 215 aa1.2□□□□□ -2.22
LRCH3-211ENST00000466054 RPL30P62888 115 aaKnown RBP1.2□□□□□ -2.22
LRCH3-211ENST00000466054 PPP1R1AQ13522 171 aa1.2□□□□□ -2.22
LRCH3-211ENST00000466054 BATFQ16520 125 aa1.2□□□□□ -2.22
LRCH3-211ENST00000466054 ACSM3Q53FZ2 586 aa1.2□□□□□ -2.22
LRCH3-211ENST00000466054 C1orf194Q5T5A4 169 aa1.2□□□□□ -2.22
LRCH3-211ENST00000466054 C9orf64Q5T6V5 341 aa1.2□□□□□ -2.22
LRCH3-211ENST00000466054 UMODL1-AS1Q8N2C9 162 aa1.2□□□□□ -2.22
LRCH3-211ENST00000466054 TMEM161BQ8NDZ6 487 aa1.2□□□□□ -2.22
LRCH3-211ENST00000466054 SGMS2Q8NHU3 365 aa1.2□□□□□ -2.22
LRCH3-211ENST00000466054 MBD3L1Q8WWY6 194 aa1.2□□□□□ -2.22
LRCH3-211ENST00000466054 Q96M85 177 aa1.2□□□□□ -2.22
LRCH3-211ENST00000466054 RETNLBQ9BQ08 111 aa1.2□□□□□ -2.22
LRCH3-211ENST00000466054 CHST6Q9GZX3 395 aa1.2□□□□□ -2.22
LRCH3-211ENST00000466054 MAP1LC3AQ9H492 121 aa1.2□□□□□ -2.22
LRCH3-211ENST00000466054 CST9LQ9H4G1 147 aa1.2□□□□□ -2.22
LRCH3-211ENST00000466054 ANAPC10Q9UM13 185 aa1.2□□□□□ -2.22
LRCH3-211ENST00000466054 C15orf41Q9Y2V0 281 aa1.2□□□□□ -2.22
LRCH3-211ENST00000466054 PIK3R4Q99570 1358 aa1.2□□□□□ -2.22
LRCH3-211ENST00000466054 SDK1Q7Z5N4 2213 aa1.19□□□□□ -2.22
LRCH3-211ENST00000466054 TRBV6-5A0A0K0K1A5 114 aa1.19□□□□□ -2.22
LRCH3-211ENST00000466054 TMEM269A0A1B0GVZ9 245 aa1.19□□□□□ -2.22
LRCH3-211ENST00000466054 H3BT86 120 aa1.19□□□□□ -2.22
LRCH3-211ENST00000466054 MSMBP08118 114 aa1.19□□□□□ -2.22
LRCH3-211ENST00000466054 CCL5P13501 91 aa1.19□□□□□ -2.22
LRCH3-211ENST00000466054 EVX1P49640 407 aa1.19□□□□□ -2.22
LRCH3-211ENST00000466054 NNATQ16517 81 aa1.19□□□□□ -2.22
LRCH3-211ENST00000466054 HIST2H3AQ71DI3 136 aa1.19□□□□□ -2.22
LRCH3-211ENST00000466054 SLC36A1Q7Z2H8 476 aa1.19□□□□□ -2.22
LRCH3-211ENST00000466054 RPP25LQ8N5L8 163 aaKnown RBP1.19□□□□□ -2.22
LRCH3-211ENST00000466054 C10orf105Q8TEF2 133 aa1.19□□□□□ -2.22
LRCH3-211ENST00000466054 RSL24D1Q9UHA3 163 aaKnown RBP1.19□□□□□ -2.22
LRCH3-211ENST00000466054 COQ4Q9Y3A0 265 aa1.19□□□□□ -2.22
LRCH3-211ENST00000466054 SCAF11Q99590 1463 aaKnown RBP1.18□□□□□ -2.22
LRCH3-211ENST00000466054 MED13Q9UHV7 2174 aa1.18□□□□□ -2.22
LRCH3-211ENST00000466054 ZFHX2Q9C0A1 2572 aaPredicted RBP1.18□□□□□ -2.22
LRCH3-211ENST00000466054 A0A0D9SEW6 157 aa1.18□□□□□ -2.22
LRCH3-211ENST00000466054 OR4C45A6NMZ5 311 aa1.18□□□□□ -2.22
LRCH3-211ENST00000466054 PLA2G10O15496 165 aa1.18□□□□□ -2.22
LRCH3-211ENST00000466054 OCM2P0CE71 109 aa1.18□□□□□ -2.22
LRCH3-211ENST00000466054 MSNP26038 577 aaKnown RBP1.18□□□□□ -2.22
LRCH3-211ENST00000466054 HAAOP46952 286 aa1.18□□□□□ -2.22
LRCH3-211ENST00000466054 TNFAIP6P98066 277 aaPredicted RBP1.18□□□□□ -2.22
LRCH3-211ENST00000466054 MLLT11Q13015 90 aaPredicted RBP1.18□□□□□ -2.22
LRCH3-211ENST00000466054 TNFAIP8L3Q5GJ75 292 aa1.18□□□□□ -2.22
LRCH3-211ENST00000466054 FAM151BQ6UXP7 276 aa1.18□□□□□ -2.22
LRCH3-211ENST00000466054 UNQ6190/PRO20217Q6UXQ8 127 aa1.18□□□□□ -2.22
LRCH3-211ENST00000466054 C7orf65Q6ZTY9 151 aa1.18□□□□□ -2.22
LRCH3-211ENST00000466054 COMMD7Q86VX2 200 aa1.18□□□□□ -2.22
LRCH3-211ENST00000466054 RPS19BP1Q86WX3 136 aaKnown RBP1.18□□□□□ -2.22
LRCH3-211ENST00000466054 TMEM86AQ8N2M4 240 aa1.18□□□□□ -2.22
LRCH3-211ENST00000466054 TBC1D19Q8N5T2 526 aa1.18□□□□□ -2.22
LRCH3-211ENST00000466054 TMEM156Q8N614 296 aa1.18□□□□□ -2.22
LRCH3-211ENST00000466054 PIGXQ8TBF5 258 aa1.18□□□□□ -2.22
LRCH3-211ENST00000466054 SOX21Q9Y651 276 aaPredicted RBP1.18□□□□□ -2.22
LRCH3-211ENST00000466054 FLT4P35916 1363 aa1.18□□□□□ -2.22
LRCH3-211ENST00000466054 SMARCA4P51532 1647 aa1.18□□□□□ -2.22
LRCH3-211ENST00000466054 GREB1Q4ZG55 1949 aa1.17□□□□□ -2.22
LRCH3-211ENST00000466054 FLG2Q5D862 2391 aaPredicted RBP1.17□□□□□ -2.22
LRCH3-211ENST00000466054 IGKV2-40A0A087WW87 121 aaPredicted RBP1.17□□□□□ -2.22
LRCH3-211ENST00000466054 MEIS3P1A6NDR6 274 aa1.17□□□□□ -2.22
LRCH3-211ENST00000466054 OR51F1A6NGY5 319 aa1.17□□□□□ -2.22
LRCH3-211ENST00000466054 MRPS14O60783 128 aaKnown RBP1.17□□□□□ -2.22
LRCH3-211ENST00000466054 NSA2O95478 260 aaKnown RBP1.17□□□□□ -2.22
LRCH3-211ENST00000466054 IGKV2D-40P01614 121 aaPredicted RBP1.17□□□□□ -2.22
LRCH3-211ENST00000466054 CRPP02741 224 aa1.17□□□□□ -2.22
LRCH3-211ENST00000466054 TFPTP0C1Z6 253 aa1.17□□□□□ -2.22
LRCH3-211ENST00000466054 COX5BP10606 129 aa1.17□□□□□ -2.22
LRCH3-211ENST00000466054 MYL12AP19105 171 aa1.17□□□□□ -2.22
LRCH3-211ENST00000466054 CCL1P22362 96 aa1.17□□□□□ -2.22
LRCH3-211ENST00000466054 RPL12P30050 165 aaKnown RBP1.17□□□□□ -2.22
LRCH3-211ENST00000466054 AQP4P55087 323 aa1.17□□□□□ -2.22
LRCH3-211ENST00000466054 LRRN1Q6UXK5 716 aa1.17□□□□□ -2.22
LRCH3-211ENST00000466054 FP248Q71RG6 208 aaPredicted RBP1.17□□□□□ -2.22
LRCH3-211ENST00000466054 SSX8Q7RTT4 187 aa1.17□□□□□ -2.22
LRCH3-211ENST00000466054 ROPN1LQ96C74 230 aa1.17□□□□□ -2.22
LRCH3-211ENST00000466054 DRC3Q9H069 523 aa1.17□□□□□ -2.22
LRCH3-211ENST00000466054 CXorf21Q9HAI6 301 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms