RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 Q6ZRN7 208 aaPredicted RBP0.86□□□□□ -2.27
SSB-207ENST00000465871 Q6ZTI0 123 aa0.86□□□□□ -2.27
SSB-207ENST00000465871 GID4Q8IVV7 300 aa0.86□□□□□ -2.27
SSB-207ENST00000465871 UMODL1-AS1Q8N2C9 162 aa0.86□□□□□ -2.27
SSB-207ENST00000465871 OR51D1Q8NGF3 324 aa0.86□□□□□ -2.27
SSB-207ENST00000465871 OR5B17Q8NGF7 314 aa0.86□□□□□ -2.27
SSB-207ENST00000465871 ERMAPQ96PL5 475 aaPredicted RBP0.86□□□□□ -2.27
SSB-207ENST00000465871 SPZ1Q9BXG8 430 aa0.86□□□□□ -2.27
SSB-207ENST00000465871 MRPS26Q9BYN8 205 aaKnown RBP0.86□□□□□ -2.27
SSB-207ENST00000465871 OR51I2Q9H344 312 aa0.86□□□□□ -2.27
SSB-207ENST00000465871 GPR84Q9NQS5 396 aa0.86□□□□□ -2.27
SSB-207ENST00000465871 C3orf18Q9UK00 162 aa0.86□□□□□ -2.27
SSB-207ENST00000465871 PRELID1Q9Y255 219 aa0.86□□□□□ -2.27
SSB-207ENST00000465871 COQ4Q9Y3A0 265 aa0.86□□□□□ -2.27
SSB-207ENST00000465871 FBN2P35556 2912 aa0.86□□□□□ -2.27
SSB-207ENST00000465871 CHD5Q8TDI0 1954 aa0.86□□□□□ -2.27
SSB-207ENST00000465871 KIAA2026Q5HYC2 2103 aa0.86□□□□□ -2.27
SSB-207ENST00000465871 ABCC11Q96J66 1382 aa0.85□□□□□ -2.27
SSB-207ENST00000465871 IGHV3-64A0A075B6Q5 118 aa0.85□□□□□ -2.27
SSB-207ENST00000465871 C21orf140B9A014 251 aa0.85□□□□□ -2.27
SSB-207ENST00000465871 DISC1C4P0D8 188 aa0.85□□□□□ -2.27
SSB-207ENST00000465871 I3L521 148 aa0.85□□□□□ -2.27
SSB-207ENST00000465871 PLA2G10O15496 165 aa0.85□□□□□ -2.27
SSB-207ENST00000465871 PGLYRP1O75594 196 aaPredicted RBP0.85□□□□□ -2.27
SSB-207ENST00000465871 FAM228BP0C875 321 aa0.85□□□□□ -2.27
SSB-207ENST00000465871 PSMB8P28062 276 aa0.85□□□□□ -2.27
SSB-207ENST00000465871 S100A7P31151 101 aa0.85□□□□□ -2.27
SSB-207ENST00000465871 CCR7P32248 378 aa0.85□□□□□ -2.27
SSB-207ENST00000465871 HAAOP46952 286 aa0.85□□□□□ -2.27
SSB-207ENST00000465871 CSN1S1P47710 185 aa0.85□□□□□ -2.27
SSB-207ENST00000465871 AP2S1P53680 142 aaPredicted RBP0.85□□□□□ -2.27
SSB-207ENST00000465871 TPI1P60174 286 aa0.85□□□□□ -2.27
SSB-207ENST00000465871 FKBP1AP62942 108 aaKnown RBP0.85□□□□□ -2.27
SSB-207ENST00000465871 PRB3Q04118 309 aaPredicted RBP0.85□□□□□ -2.27
SSB-207ENST00000465871 TMEM155Q4W5P6 130 aa0.85□□□□□ -2.27
SSB-207ENST00000465871 HIST2H3PS2Q5TEC6 136 aa0.85□□□□□ -2.27
SSB-207ENST00000465871 LPCAT4Q643R3 524 aa0.85□□□□□ -2.27
SSB-207ENST00000465871 LYZL1Q6UWQ5 148 aa0.85□□□□□ -2.27
SSB-207ENST00000465871 C5orf46Q6UWT4 87 aa0.85□□□□□ -2.27
SSB-207ENST00000465871 SLC22A24Q8N4F4 322 aa0.85□□□□□ -2.27
SSB-207ENST00000465871 OR1L8Q8NGR8 309 aa0.85□□□□□ -2.27
SSB-207ENST00000465871 SGMS2Q8NHU3 365 aa0.85□□□□□ -2.27
SSB-207ENST00000465871 ACOT12Q8WYK0 555 aa0.85□□□□□ -2.27
SSB-207ENST00000465871 SLC7A6Q92536 515 aa0.85□□□□□ -2.27
SSB-207ENST00000465871 DOHHQ9BU89 302 aa0.85□□□□□ -2.27
SSB-207ENST00000465871 VCX3BQ9H321 246 aa0.85□□□□□ -2.27
SSB-207ENST00000465871 PRO2289Q9P1D8 64 aa0.85□□□□□ -2.27
SSB-207ENST00000465871 KLK5Q9Y337 293 aaPredicted RBP0.85□□□□□ -2.27
SSB-207ENST00000465871 RBM7Q9Y580 266 aaKnown RBP0.85□□□□□ -2.27
SSB-207ENST00000465871 CUL9Q8IWT3 2517 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 MDC1Q14676 2089 aaKnown RBP0.84□□□□□ -2.27
SSB-207ENST00000465871 NUP160Q12769 1436 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 TRAV38-1A0A0B4J264 116 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 IGHV1-69-2A0A0G2JMI3 117 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 A0A0J9YW62 118 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 A0A1B0GW54 56 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 OR4C45A6NMZ5 311 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 ACOX3O15254 700 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 TGOLN2O43493 480 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 NSA2O95478 260 aaKnown RBP0.84□□□□□ -2.27
SSB-207ENST00000465871 PPBPP02775 128 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 ISG15P05161 165 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 CALB1P05937 261 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 ZNF705DP0CH99 300 aaPredicted RBP0.84□□□□□ -2.27
SSB-207ENST00000465871 UCHL3P15374 230 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 KCNE1P15382 129 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 MYL12AP19105 171 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 CCL1P22362 96 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 MSNP26038 577 aaKnown RBP0.84□□□□□ -2.27
SSB-207ENST00000465871 ALDH3A1P30838 453 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 RPL28P46779 137 aaKnown RBP0.84□□□□□ -2.27
SSB-207ENST00000465871 IDH3GP51553 393 aaPredicted RBP0.84□□□□□ -2.27
SSB-207ENST00000465871 OR4D2P58180 307 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 RAB14P61106 215 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 NAA20P61599 178 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 RELAQ04206 551 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 COQ5Q5HYK3 327 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 C9orf64Q5T6V5 341 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 C8orf74Q6P047 294 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 SSX8Q7RTT4 187 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 KTN1-AS1Q86SY8 53 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 COA5Q86WW8 74 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 IQCF2Q8IXL9 164 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 C10orf67Q8IYJ2 551 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 C10orf126Q8N4M7 172 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 ZNF676Q8N7Q3 588 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 OR51I1Q9H343 314 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 C8orf4Q9NR00 106 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 PAQR5Q9NXK6 330 aaPredicted RBP0.84□□□□□ -2.27
SSB-207ENST00000465871 AK3Q9UIJ7 227 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 ANGPT4Q9Y264 503 aa0.84□□□□□ -2.27
SSB-207ENST00000465871 LSM5Q9Y4Y9 91 aaKnown RBP0.84□□□□□ -2.27
SSB-207ENST00000465871 SCN9AQ15858 1988 aa0.84□□□□□ -2.28
SSB-207ENST00000465871 DENND4BO75064 1496 aaPredicted RBP0.84□□□□□ -2.28
SSB-207ENST00000465871 THSD7AQ9UPZ6 1657 aa0.84□□□□□ -2.28
SSB-207ENST00000465871 ZNF532Q9HCE3 1301 aa0.84□□□□□ -2.28
SSB-207ENST00000465871 SDK1Q7Z5N4 2213 aa0.84□□□□□ -2.28
SSB-207ENST00000465871 ABCC12Q96J65 1359 aa0.83□□□□□ -2.28
SSB-207ENST00000465871 TRGV2A0A075B6R0 118 aa0.83□□□□□ -2.28
SSB-207ENST00000465871 TRAV7A0A075B6U4 112 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms