RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 LINC00869P0C866 280 aa3.03□□□□□ -1.93
COL8A1-205ENST00000463753 PPIFP30405 207 aaKnown RBP3.03□□□□□ -1.93
COL8A1-205ENST00000463753 DAP3P51398 398 aaKnown RBP3.03□□□□□ -1.93
COL8A1-205ENST00000463753 CTXN1P60606 82 aa3.03□□□□□ -1.93
COL8A1-205ENST00000463753 RHOBP62745 196 aa3.03□□□□□ -1.93
COL8A1-205ENST00000463753 CCL7P80098 99 aa3.03□□□□□ -1.93
COL8A1-205ENST00000463753 MRPL23Q16540 153 aaKnown RBP3.03□□□□□ -1.93
COL8A1-205ENST00000463753 LRRC75BQ2VPJ9 315 aa3.03□□□□□ -1.93
COL8A1-205ENST00000463753 CEACAM16Q2WEN9 425 aa3.03□□□□□ -1.93
COL8A1-205ENST00000463753 CTXN3Q4LDR2 81 aa3.03□□□□□ -1.93
COL8A1-205ENST00000463753 EMC4Q5J8M3 183 aa3.03□□□□□ -1.93
COL8A1-205ENST00000463753 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.03□□□□□ -1.93
COL8A1-205ENST00000463753 RAB42Q8N4Z0 105 aa3.03□□□□□ -1.93
COL8A1-205ENST00000463753 FAM169BQ8N8A8 192 aa3.03□□□□□ -1.93
COL8A1-205ENST00000463753 ZBTB34Q8NCN2 500 aa3.03□□□□□ -1.93
COL8A1-205ENST00000463753 OR51T1Q8NGJ9 327 aa3.03□□□□□ -1.93
COL8A1-205ENST00000463753 PPTC7Q8NI37 304 aa3.03□□□□□ -1.93
COL8A1-205ENST00000463753 SCAMP4Q969E2 229 aa3.03□□□□□ -1.93
COL8A1-205ENST00000463753 WDR34Q96EX3 536 aa3.03□□□□□ -1.93
COL8A1-205ENST00000463753 CNRIP1Q96F85 164 aaPredicted RBP3.03□□□□□ -1.93
COL8A1-205ENST00000463753 RAX2Q96IS3 184 aa3.03□□□□□ -1.93
COL8A1-205ENST00000463753 OR2A5Q96R48 311 aa3.03□□□□□ -1.93
COL8A1-205ENST00000463753 CITED2Q99967 270 aaPredicted RBP3.03□□□□□ -1.93
COL8A1-205ENST00000463753 TMEM59Q9BXS4 323 aa3.03□□□□□ -1.93
COL8A1-205ENST00000463753 KRTAP9-2Q9BYQ4 174 aa3.03□□□□□ -1.93
COL8A1-205ENST00000463753 SPANXB1Q9NS25 103 aaPredicted RBP3.03□□□□□ -1.93
COL8A1-205ENST00000463753 MCTS1Q9ULC4 181 aaKnown RBP3.03□□□□□ -1.93
COL8A1-205ENST00000463753 CSDC2Q9Y534 153 aaKnown RBP3.03□□□□□ -1.93
COL8A1-205ENST00000463753 INSIG2Q9Y5U4 225 aa3.03□□□□□ -1.93
COL8A1-205ENST00000463753 CACNA1GO43497 2377 aa3.03□□□□□ -1.93
COL8A1-205ENST00000463753 COL27A1Q8IZC6 1860 aaPredicted RBP3.02□□□□□ -1.93
COL8A1-205ENST00000463753 TRGV10A0A0A0MS01 117 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 UBE2L5PA0A1B0GUS4 154 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 LOC102725191A0A1B0GVB3 256 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 CEACAM18A8MTB9 384 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 VWC2LB2RUY7 222 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 DEGS1O15121 323 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 NDUFS4O43181 175 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 NAPSAO96009 420 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 TNFP01375 233 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 CFIP05156 583 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 IAPPP10997 89 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 NPPCP23582 126 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 CMPK1P30085 196 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 SRD5A2P31213 254 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 GLRXP35754 106 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 OR3A4PP47883 348 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 TMEM50BP56557 158 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 RBM11P57052 281 aaKnown RBP3.02□□□□□ -1.93
COL8A1-205ENST00000463753 FHL1Q13642 323 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 C3AR1Q16581 482 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 Q6ZSR6 202 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 DOK3Q7L591 496 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 ZNF695Q8IW36 515 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 SLC22A24Q8N4F4 322 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 NAT6Q93015 286 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 APOBEC3DQ96AK3 386 aaPredicted RBP3.02□□□□□ -1.93
COL8A1-205ENST00000463753 MSI2Q96DH6 328 aaKnown RBP3.02□□□□□ -1.93
COL8A1-205ENST00000463753 DGAT2Q96PD7 388 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 TMEM70Q9BUB7 260 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 ONECUT1Q9UBC0 465 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 TAC3Q9UHF0 121 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 HS3ST2Q9Y278 367 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 KIAA1549Q9HCM3 1950 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 PRRC2BQ5JSZ5 2229 aaKnown RBP3.02□□□□□ -1.93
COL8A1-205ENST00000463753 DOCK11Q5JSL3 2073 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 DOCK6Q96HP0 2047 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 KRTAP4-8A0A0G2JLE6 195 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 PRSS37A4D1T9 235 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 GAGE12JA6NER3 117 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 PRSS29PA6NIE9 313 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 GAGE7O76087 117 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 LYPD3O95274 346 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 GAGE12FP0CL80 117 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 GAGE12GP0CL81 117 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 GAGE12IP0CL82 117 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 IGFBP3P17936 291 aaPredicted RBP3.02□□□□□ -1.93
COL8A1-205ENST00000463753 F2RP25116 425 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 CRYBB3P26998 211 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 CFPP27918 469 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 BLVRBP30043 206 aaPredicted RBP3.02□□□□□ -1.93
COL8A1-205ENST00000463753 ATP5G3P48201 142 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 MFAP4P55083 255 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 XGP55808 180 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 GRB2P62993 217 aaKnown RBP3.02□□□□□ -1.93
COL8A1-205ENST00000463753 GAGE4Q13068 117 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 OR10J3Q5JRS4 329 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 LINC00173Q6ZV60 143 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 ZNF547Q8IVP9 402 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 OR4N5Q8IXE1 308 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 GLMPQ8WWB7 406 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 MBD3L1Q8WWY6 194 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 PP6455Q8WZ26 134 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 NXF5Q9H1B4 397 aaKnown RBP3.02□□□□□ -1.93
COL8A1-205ENST00000463753 ENY2Q9NPA8 101 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 SCRT2Q9NQ03 307 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 IL36GQ9NZH8 169 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 TMEM14AQ9Y6G1 99 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 OTOGLQ3ZCN5 2332 aa3.02□□□□□ -1.93
COL8A1-205ENST00000463753 PTPRDP23468 1912 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms