RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 ZCCHC24Q8N2G6 241 aaKnown RBP8.14□□□□□ -1.11
PTPRD-207ENST00000463477 OR2V2Q96R30 315 aa8.14□□□□□ -1.11
PTPRD-207ENST00000463477 TMEM147Q9BVK8 224 aa8.14□□□□□ -1.11
PTPRD-207ENST00000463477 DYNLRB1Q9NP97 96 aa8.14□□□□□ -1.11
PTPRD-207ENST00000463477 TLN2Q9Y4G6 2542 aa8.14□□□□□ -1.11
PTPRD-207ENST00000463477 ZANQ9Y493 2812 aa8.14□□□□□ -1.11
PTPRD-207ENST00000463477 SETD2Q9BYW2 2564 aaPredicted RBP8.14□□□□□ -1.11
PTPRD-207ENST00000463477 CXorf65A6NEN9 183 aa8.14□□□□□ -1.11
PTPRD-207ENST00000463477 LINC00473A8K010 186 aa8.14□□□□□ -1.11
PTPRD-207ENST00000463477 C1orf196B1AJZ1 125 aa8.14□□□□□ -1.11
PTPRD-207ENST00000463477 B4DEV8 164 aa8.14□□□□□ -1.11
PTPRD-207ENST00000463477 NDUFS8O00217 210 aa8.14□□□□□ -1.11
PTPRD-207ENST00000463477 HPRT1P00492 218 aa8.14□□□□□ -1.11
PTPRD-207ENST00000463477 KRASP01116 189 aa8.14□□□□□ -1.11
PTPRD-207ENST00000463477 MBP02144 154 aa8.14□□□□□ -1.11
PTPRD-207ENST00000463477 MDKP21741 143 aaPredicted RBP8.14□□□□□ -1.11
PTPRD-207ENST00000463477 TAGLN2P37802 199 aaKnown RBP8.14□□□□□ -1.11
PTPRD-207ENST00000463477 GNB2P62879 340 aa8.14□□□□□ -1.11
PTPRD-207ENST00000463477 ZNF816Q0VGE8 651 aaPredicted RBP8.14□□□□□ -1.11
PTPRD-207ENST00000463477 ETV3LQ6ZN32 361 aa8.14□□□□□ -1.11
PTPRD-207ENST00000463477 C1QL4Q86Z23 238 aa8.14□□□□□ -1.11
PTPRD-207ENST00000463477 ZNF561Q8N587 486 aa8.14□□□□□ -1.11
PTPRD-207ENST00000463477 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.14□□□□□ -1.11
PTPRD-207ENST00000463477 OR52E5Q8NH55 327 aa8.14□□□□□ -1.11
PTPRD-207ENST00000463477 Q8TCH9 128 aa8.14□□□□□ -1.11
PTPRD-207ENST00000463477 C10orf105Q8TEF2 133 aa8.14□□□□□ -1.11
PTPRD-207ENST00000463477 FAM168AQ92567 244 aa8.14□□□□□ -1.11
PTPRD-207ENST00000463477 SDSLQ96GA7 329 aa8.14□□□□□ -1.11
PTPRD-207ENST00000463477 YPEL4Q96NS1 127 aa8.14□□□□□ -1.11
PTPRD-207ENST00000463477 RSG1Q9BU20 258 aa8.14□□□□□ -1.11
PTPRD-207ENST00000463477 FAM234AQ9H0X4 552 aa8.14□□□□□ -1.11
PTPRD-207ENST00000463477 SIRT7Q9NRC8 400 aa8.14□□□□□ -1.11
PTPRD-207ENST00000463477 IL19Q9UHD0 177 aa8.14□□□□□ -1.11
PTPRD-207ENST00000463477 PSG11Q9UQ72 335 aa8.14□□□□□ -1.11
PTPRD-207ENST00000463477 DYSFO75923 2080 aa8.13□□□□□ -1.11
PTPRD-207ENST00000463477 IGHV4-30-2A0A087WSY4 118 aa8.13□□□□□ -1.11
PTPRD-207ENST00000463477 MARCH11A6NNE9 402 aa8.13□□□□□ -1.11
PTPRD-207ENST00000463477 H3BQ15 152 aa8.13□□□□□ -1.11
PTPRD-207ENST00000463477 LY6HO94772 140 aa8.13□□□□□ -1.11
PTPRD-207ENST00000463477 IFNA1P01562 189 aa8.13□□□□□ -1.11
PTPRD-207ENST00000463477 BCL2P10415 239 aa8.13□□□□□ -1.11
PTPRD-207ENST00000463477 SLC25A16P16260 332 aa8.13□□□□□ -1.11
PTPRD-207ENST00000463477 GPR12P47775 334 aa8.13□□□□□ -1.11
PTPRD-207ENST00000463477 PDLIM4P50479 330 aa8.13□□□□□ -1.11
PTPRD-207ENST00000463477 RAB7AP51149 207 aa8.13□□□□□ -1.11
PTPRD-207ENST00000463477 LOXL3P58215 753 aa8.13□□□□□ -1.11
PTPRD-207ENST00000463477 PNRC1Q12796 327 aaPredicted RBP8.13□□□□□ -1.11
PTPRD-207ENST00000463477 ZNF726P1Q15940 193 aa8.13□□□□□ -1.11
PTPRD-207ENST00000463477 HAGHQ16775 308 aa8.13□□□□□ -1.11
PTPRD-207ENST00000463477 Q3ZCU0 254 aa8.13□□□□□ -1.11
PTPRD-207ENST00000463477 LINC00518Q8N0U6 118 aa8.13□□□□□ -1.11
PTPRD-207ENST00000463477 DTD1Q8TEA8 209 aa8.13□□□□□ -1.11
PTPRD-207ENST00000463477 TVP23CQ96ET8 276 aa8.13□□□□□ -1.11
PTPRD-207ENST00000463477 RCC1LQ96I51 464 aaKnown RBP8.13□□□□□ -1.11
PTPRD-207ENST00000463477 NIPSNAP3BQ9BS92 247 aa8.13□□□□□ -1.11
PTPRD-207ENST00000463477 LINC00574Q9H8X3 128 aa8.13□□□□□ -1.11
PTPRD-207ENST00000463477 TET2Q6N021 2002 aaPredicted RBP8.13□□□□□ -1.11
PTPRD-207ENST00000463477 ABCA1O95477 2261 aa8.12□□□□□ -1.11
PTPRD-207ENST00000463477 A0A1B0GV50 99 aa8.12□□□□□ -1.11
PTPRD-207ENST00000463477 C17orf100A8MU93 164 aa8.12□□□□□ -1.11
PTPRD-207ENST00000463477 VWC2LB2RUY7 222 aa8.12□□□□□ -1.11
PTPRD-207ENST00000463477 RNF223E7ERA6 249 aa8.12□□□□□ -1.11
PTPRD-207ENST00000463477 ST8SIA5O15466 376 aa8.12□□□□□ -1.11
PTPRD-207ENST00000463477 PROP1O75360 226 aa8.12□□□□□ -1.11
PTPRD-207ENST00000463477 DAOP14920 347 aa8.12□□□□□ -1.11
PTPRD-207ENST00000463477 RAB5AP20339 215 aa8.12□□□□□ -1.11
PTPRD-207ENST00000463477 MRPS11P82912 194 aaKnown RBP8.12□□□□□ -1.11
PTPRD-207ENST00000463477 HABP2Q14520 560 aaPredicted RBP8.12□□□□□ -1.11
PTPRD-207ENST00000463477 BTNL3Q6UXE8 466 aa8.12□□□□□ -1.11
PTPRD-207ENST00000463477 ZNF429Q86V71 674 aa8.12□□□□□ -1.11
PTPRD-207ENST00000463477 MOGAT3Q86VF5 341 aa8.12□□□□□ -1.11
PTPRD-207ENST00000463477 TPRX1Q8N7U7 411 aa8.12□□□□□ -1.11
PTPRD-207ENST00000463477 CYB561D1Q8N8Q1 229 aa8.12□□□□□ -1.11
PTPRD-207ENST00000463477 OR10P1Q8NGE3 313 aa8.12□□□□□ -1.11
PTPRD-207ENST00000463477 ITLN1Q8WWA0 313 aa8.12□□□□□ -1.11
PTPRD-207ENST00000463477 R3HDM4Q96D70 268 aa8.12□□□□□ -1.11
PTPRD-207ENST00000463477 ZNF251Q9BRH9 671 aa8.12□□□□□ -1.11
PTPRD-207ENST00000463477 SAV1Q9H4B6 383 aaPredicted RBP8.12□□□□□ -1.11
PTPRD-207ENST00000463477 GSX1Q9H4S2 264 aaPredicted RBP8.12□□□□□ -1.11
PTPRD-207ENST00000463477 RNF7Q9UBF6 113 aa8.12□□□□□ -1.11
PTPRD-207ENST00000463477 NIPBLQ6KC79 2804 aaeCLIP8.11□□□□□ -1.11
PTPRD-207ENST00000463477 A0A096LNT2 108 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 IGHV3-43A0A0B4J1X8 118 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 CTXND1A0A1B0GTU2 59 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 UBE2L5PA0A1B0GUS4 154 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 MAP1LC3B2A6NCE7 125 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 SMAD7O15105 426 aaKnown RBP8.11□□□□□ -1.11
PTPRD-207ENST00000463477 TFF1P04155 84 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 ARG1P05089 322 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 IGHV3-43DP0DP04 118 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 TNFSF4P23510 183 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 SPCS3P61009 180 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 RPP30P78346 268 aaKnown RBP8.11□□□□□ -1.11
PTPRD-207ENST00000463477 HOXA4Q00056 320 aaPredicted RBP8.11□□□□□ -1.11
PTPRD-207ENST00000463477 LOXL1Q08397 574 aaPredicted RBP8.11□□□□□ -1.11
PTPRD-207ENST00000463477 EDDM3AQ14507 147 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 FAM90A2PQ658T7 463 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 NCR3LG1Q68D85 454 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 STUMQ69YW2 141 aa8.11□□□□□ -1.11
PTPRD-207ENST00000463477 FAM53AQ6NSI3 398 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms