RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 IGHV2-70DA0A0C4DH43 119 aa7.27□□□□□ -1.25
VPS50-207ENST00000458530 LEUTXA8MZ59 168 aa7.27□□□□□ -1.25
VPS50-207ENST00000458530 H0YIZ8 118 aa7.27□□□□□ -1.25
VPS50-207ENST00000458530 H7C2Y5 167 aa7.27□□□□□ -1.25
VPS50-207ENST00000458530 SYNGR2O43760 224 aa7.27□□□□□ -1.25
VPS50-207ENST00000458530 IGLV1-47P01700 117 aa7.27□□□□□ -1.25
VPS50-207ENST00000458530 GAPDHP04406 335 aaKnown RBP7.27□□□□□ -1.25
VPS50-207ENST00000458530 P0C879 139 aa7.27□□□□□ -1.25
VPS50-207ENST00000458530 EIF5AL1Q6IS14 154 aaKnown RBP7.27□□□□□ -1.25
VPS50-207ENST00000458530 CCDC144NLQ6NUI1 221 aa7.27□□□□□ -1.25
VPS50-207ENST00000458530 C11orf42Q8N5U0 333 aa7.27□□□□□ -1.25
VPS50-207ENST00000458530 OR2C3Q8N628 320 aa7.27□□□□□ -1.25
VPS50-207ENST00000458530 ZNF383Q8NA42 475 aa7.27□□□□□ -1.25
VPS50-207ENST00000458530 OR11H6Q8NGC7 330 aa7.27□□□□□ -1.25
VPS50-207ENST00000458530 OR5AN1Q8NGI8 311 aa7.27□□□□□ -1.25
VPS50-207ENST00000458530 OR4C13Q8NGP0 309 aa7.27□□□□□ -1.25
VPS50-207ENST00000458530 PHYHIPLQ96FC7 376 aa7.27□□□□□ -1.25
VPS50-207ENST00000458530 PERPQ96FX8 193 aa7.27□□□□□ -1.25
VPS50-207ENST00000458530 ZNF471Q9BX82 626 aaPredicted RBP7.27□□□□□ -1.25
VPS50-207ENST00000458530 MRPL20Q9BYC9 149 aaKnown RBP7.27□□□□□ -1.25
VPS50-207ENST00000458530 LYRM2Q9NU23 88 aaPredicted RBP7.27□□□□□ -1.25
VPS50-207ENST00000458530 FKBP11Q9NYL4 201 aa7.27□□□□□ -1.25
VPS50-207ENST00000458530 HSPB7Q9UBY9 170 aa7.27□□□□□ -1.25
VPS50-207ENST00000458530 UBQLN2Q9UHD9 624 aa7.27□□□□□ -1.25
VPS50-207ENST00000458530 POLR3KQ9Y2Y1 108 aaPredicted RBP7.27□□□□□ -1.25
VPS50-207ENST00000458530 WSB1Q9Y6I7 421 aa7.27□□□□□ -1.25
VPS50-207ENST00000458530 A0A0G2JRQ6 117 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 OOSP1A8MZH6 123 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 VWC2LB2RUY7 222 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 H0YJW9 148 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 BUB1B-PAK6H3BSN5 160 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 SMAD7O15105 426 aaKnown RBP7.26□□□□□ -1.25
VPS50-207ENST00000458530 SHOXO15266 292 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 PROP1O75360 226 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 ARG1P05089 322 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 CT45A6P0DMU7 189 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 CT45A5P0DMU8 189 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 CT45A7P0DMV0 189 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 HKR1P10072 659 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 TPT1P13693 172 aaKnown RBP7.26□□□□□ -1.25
VPS50-207ENST00000458530 COX7A1P24310 79 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 HTR1DP28221 377 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 CAV2P51636 162 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 LGALS4P56470 323 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 RAB14P61106 215 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 LMO4P61968 165 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 ARF6P62330 175 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 POLR2GP62487 172 aaKnown RBP eCLIP7.26□□□□□ -1.25
VPS50-207ENST00000458530 RPP30P78346 268 aaKnown RBP7.26□□□□□ -1.25
VPS50-207ENST00000458530 IFITM2Q01629 132 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 TNFRSF9Q07011 255 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 VMA21Q3ZAQ7 101 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 MIDNQ504T8 468 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 TMEM177Q53S58 311 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 CXorf66Q5JRM2 361 aaPredicted RBP7.26□□□□□ -1.25
VPS50-207ENST00000458530 MINOS1Q5TGZ0 78 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 TEX261Q6UWH6 196 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 OR8H3Q8N146 312 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 PNKDQ8N490 385 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 OR52E5Q8NH55 327 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 OR4A5Q8NH83 315 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 STOML3Q8TAV4 291 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 TMEM158Q8WZ71 300 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 ST6GALNAC6Q969X2 333 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 FLYWCH2Q96CP2 140 aaKnown RBP7.26□□□□□ -1.25
VPS50-207ENST00000458530 RHOVQ96L33 236 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 HARBI1Q96MB7 349 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 NABP2Q9BQ15 211 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 ENY2Q9NPA8 101 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 TMEM140Q9NV12 185 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 NUP50Q9UKX7 468 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 PRNDQ9UKY0 176 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 MINOS1-NBL1R4GNA1 71 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 U3KQ87 197 aa7.26□□□□□ -1.25
VPS50-207ENST00000458530 CEBPZOSA8MTT3 80 aa7.25□□□□□ -1.25
VPS50-207ENST00000458530 CHST1O43916 411 aa7.25□□□□□ -1.25
VPS50-207ENST00000458530 JTBO76095 146 aa7.25□□□□□ -1.25
VPS50-207ENST00000458530 TOX4O94842 621 aa7.25□□□□□ -1.25
VPS50-207ENST00000458530 FGF2P09038 288 aa7.25□□□□□ -1.25
VPS50-207ENST00000458530 LGALS7P47929 136 aa7.25□□□□□ -1.25
VPS50-207ENST00000458530 DVL1P1P54792 670 aaPredicted RBP7.25□□□□□ -1.25
VPS50-207ENST00000458530 BRWD1-AS2P59051 145 aa7.25□□□□□ -1.25
VPS50-207ENST00000458530 SPCS3P61009 180 aa7.25□□□□□ -1.25
VPS50-207ENST00000458530 UBE2KP61086 200 aa7.25□□□□□ -1.25
VPS50-207ENST00000458530 HBG1P69891 147 aa7.25□□□□□ -1.25
VPS50-207ENST00000458530 HBG2P69892 147 aa7.25□□□□□ -1.25
VPS50-207ENST00000458530 LCN2P80188 198 aa7.25□□□□□ -1.25
VPS50-207ENST00000458530 ZNF266Q14584 549 aa7.25□□□□□ -1.25
VPS50-207ENST00000458530 CLEC12BQ2HXU8 276 aa7.25□□□□□ -1.25
VPS50-207ENST00000458530 AARDQ4LEZ3 155 aa7.25□□□□□ -1.25
VPS50-207ENST00000458530 SHISA2Q6UWI4 295 aa7.25□□□□□ -1.25
VPS50-207ENST00000458530 VMO1Q7Z5L0 202 aa7.25□□□□□ -1.25
VPS50-207ENST00000458530 ZNF429Q86V71 674 aa7.25□□□□□ -1.25
VPS50-207ENST00000458530 MRPL41Q8IXM3 137 aaKnown RBP7.25□□□□□ -1.25
VPS50-207ENST00000458530 Q8N7P7 452 aa7.25□□□□□ -1.25
VPS50-207ENST00000458530 ZNF680Q8NEM1 530 aa7.25□□□□□ -1.25
VPS50-207ENST00000458530 LHX4Q969G2 390 aa7.25□□□□□ -1.25
VPS50-207ENST00000458530 SMIM8Q96KF7 97 aa7.25□□□□□ -1.25
VPS50-207ENST00000458530 TSNAXQ99598 290 aaKnown RBP7.25□□□□□ -1.25
VPS50-207ENST00000458530 MAGT1Q9H0U3 335 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms