RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 ATP5G3P48201 142 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 GNB1P62873 340 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 EGR4Q05215 589 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 FAM71F2Q6NXP2 309 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 FAM19A2Q8N3H0 131 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 FLYWCH2Q96CP2 140 aaKnown RBP4.27□□□□□ -1.73
PCDH9-203ENST00000456367 AICDAQ9GZX7 198 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 MRPL16Q9NX20 251 aaKnown RBP4.27□□□□□ -1.73
PCDH9-203ENST00000456367 DLL3Q9NYJ7 618 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 C9JQL5 133 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 ATXN7O15265 892 aaPredicted RBP4.26□□□□□ -1.73
PCDH9-203ENST00000456367 FOXS1O43638 330 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 OR9G9P0C7N8 305 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 OTX1P32242 354 aaPredicted RBP4.26□□□□□ -1.73
PCDH9-203ENST00000456367 EMP1P54849 157 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 YPEL3P61236 119 aaPredicted RBP4.26□□□□□ -1.73
PCDH9-203ENST00000456367 PAPPA-AS1Q5QFB9 102 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 SPSB3Q6PJ21 355 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 OR2Z1Q8NG97 314 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 LRRC29Q8WV35 223 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 FMC1Q96HJ9 113 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 RASL11BQ9BPW5 248 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 FAM60AQ9NP50 221 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 CKAP5Q14008 2032 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 SHISA7A6NL88 538 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 DEFB108AA8MXU0 73 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 H3BRM9 83 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 HRKO00198 91 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 MGST3O14880 152 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 APOMO95445 188 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 PPP1R17O96001 155 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 APOHP02749 345 aaPredicted RBP4.26□□□□□ -1.73
PCDH9-203ENST00000456367 PSG1P11464 419 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 GAGE2BQ13066 116 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 GAGE2EQ4V326 116 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 TMEM196Q5HYL7 178 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 TMEM256Q8N2U0 113 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 DRAM1Q8N682 238 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 CACNG8Q8WXS5 425 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 VOPP1Q96AW1 172 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 SARAFQ96BY9 339 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 MRAP2Q96G30 205 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 ZNF355PQ9NSJ1 428 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 GAGE2DQ9UEU5 116 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 JPT1Q9UK76 154 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 TCF19Q9Y242 345 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 WDR83OSQ9Y284 106 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 LTBP4Q8N2S1 1624 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 LOC389332A0A1B0GUA5 103 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 LINC01549A6NIU2 74 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 C3orf80F5H4A9 247 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 PEX7O00628 323 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 NDUFB3O43676 98 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 C9orf50Q5SZB4 431 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 C6orf15Q6UXA7 325 aaPredicted RBP4.26□□□□□ -1.73
PCDH9-203ENST00000456367 PRNTQ86SH4 94 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 OCC1Q8TAD7 63 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 ZNF479Q96JC4 524 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 LRRC61Q9BV99 259 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 LINC00271P0C7V0 271 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 TRA2AQ13595 282 aaKnown RBP eCLIP4.26□□□□□ -1.73
PCDH9-203ENST00000456367 IL11RAQ14626 422 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 FER1L6-AS1Q8NA97 138 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 GPR82Q96P67 336 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 ATP6V0BQ99437 205 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 ANAPC10Q9UM13 185 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 PROCRQ9UNN8 238 aa4.26□□□□□ -1.73
PCDH9-203ENST00000456367 F11RQ9Y624 299 aaKnown RBP4.26□□□□□ -1.73
PCDH9-203ENST00000456367 IGHV3-43A0A0B4J1X8 118 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 IGHV2OR16-5A0A0B4J2B6 119 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 A8MWV9 139 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 PPBPP02775 128 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 IGHV3-43DP0DP04 118 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 CX3CL1P78423 397 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 MPV17L2Q567V2 206 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 TSKUQ8WUA8 353 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 ST6GALNAC6Q969X2 333 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 PRELID3AQ96N28 172 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 RGPD3A6NKT7 1758 aaPredicted RBP4.25□□□□□ -1.73
PCDH9-203ENST00000456367 RGPD4Q7Z3J3 1758 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 IGHV5-51A0A0C4DH38 117 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 ZNF716A6NP11 495 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 NAPSAO96009 420 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 EGR1P18146 543 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 PTGDSP41222 190 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 PSG9Q00887 426 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 PSG4Q00888 419 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 NRN1LQ496H8 165 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 RNFT1Q5M7Z0 435 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 ORMDL3Q8N138 153 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.25□□□□□ -1.73
PCDH9-203ENST00000456367 SRSF12Q8WXF0 261 aaKnown RBP4.25□□□□□ -1.73
PCDH9-203ENST00000456367 TMEM54Q969K7 222 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 HARBI1Q96MB7 349 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 RASL10BQ96S79 203 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 UFC1Q9Y3C8 167 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 PDE4DIPQ5VU43 2346 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 HBDP02042 147 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 MC5RP33032 325 aa4.25□□□□□ -1.73
PCDH9-203ENST00000456367 TMEM140Q9NV12 185 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms