RNA–Protein interactions for RNA: ENST00000452724.1

USP40-209, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-209ENST00000452724 COX5BP10606 129 aa1.04□□□□□ -2.24
USP40-209ENST00000452724 GPX2P18283 190 aa1.04□□□□□ -2.24
USP40-209ENST00000452724 MYL12AP19105 171 aa1.04□□□□□ -2.24
USP40-209ENST00000452724 SBSNQ6UWP8 590 aa1.04□□□□□ -2.24
USP40-209ENST00000452724 HAVCR2Q8TDQ0 301 aa1.04□□□□□ -2.24
USP40-209ENST00000452724 RAB2BQ8WUD1 216 aa1.04□□□□□ -2.24
USP40-209ENST00000452724 Q96M85 177 aa1.04□□□□□ -2.24
USP40-209ENST00000452724 IMMP2LQ96T52 175 aa1.04□□□□□ -2.24
USP40-209ENST00000452724 CCL13Q99616 98 aa1.04□□□□□ -2.24
USP40-209ENST00000452724 RETNLBQ9BQ08 111 aa1.04□□□□□ -2.24
USP40-209ENST00000452724 OR51I2Q9H344 312 aa1.04□□□□□ -2.24
USP40-209ENST00000452724 RBM7Q9Y580 266 aaKnown RBP1.04□□□□□ -2.24
USP40-209ENST00000452724 TIMM9Q9Y5J7 89 aa1.04□□□□□ -2.24
USP40-209ENST00000452724 DICER1Q9UPY3 1922 aaKnown RBP1.04□□□□□ -2.24
USP40-209ENST00000452724 ABCC12Q96J65 1359 aa1.04□□□□□ -2.24
USP40-209ENST00000452724 REREQ9P2R6 1566 aa1.04□□□□□ -2.24
USP40-209ENST00000452724 WDR90Q96KV7 1748 aa1.03□□□□□ -2.24
USP40-209ENST00000452724 COL6A6A6NMZ7 2263 aa1.03□□□□□ -2.24
USP40-209ENST00000452724 IGHV1-18A0A0C4DH31 117 aa1.03□□□□□ -2.24
USP40-209ENST00000452724 A0A0J9YW62 118 aa1.03□□□□□ -2.24
USP40-209ENST00000452724 F8W036 122 aa1.03□□□□□ -2.24
USP40-209ENST00000452724 H0Y980 276 aa1.03□□□□□ -2.24
USP40-209ENST00000452724 ISG15P05161 165 aa1.03□□□□□ -2.24
USP40-209ENST00000452724 SERPINA7P05543 415 aa1.03□□□□□ -2.24
USP40-209ENST00000452724 PSMB8P28062 276 aa1.03□□□□□ -2.24
USP40-209ENST00000452724 RPL12P30050 165 aaKnown RBP1.03□□□□□ -2.24
USP40-209ENST00000452724 AKR1C3P42330 323 aa1.03□□□□□ -2.24
USP40-209ENST00000452724 EMP1P54849 157 aa1.03□□□□□ -2.24
USP40-209ENST00000452724 TPI1P60174 286 aa1.03□□□□□ -2.24
USP40-209ENST00000452724 AP1S1P61966 158 aa1.03□□□□□ -2.24
USP40-209ENST00000452724 POLR2GP62487 172 aaKnown RBP eCLIP1.03□□□□□ -2.24
USP40-209ENST00000452724 AKR1C1Q04828 323 aa1.03□□□□□ -2.24
USP40-209ENST00000452724 PPP1R1AQ13522 171 aa1.03□□□□□ -2.24
USP40-209ENST00000452724 SAPCD1Q5SSQ6 148 aa1.03□□□□□ -2.24
USP40-209ENST00000452724 CLVS2Q5SYC1 327 aa1.03□□□□□ -2.24
USP40-209ENST00000452724 C1orf194Q5T5A4 169 aa1.03□□□□□ -2.24
USP40-209ENST00000452724 RASSF6Q6ZTQ3 369 aa1.03□□□□□ -2.24
USP40-209ENST00000452724 SLC51BQ86UW2 128 aa1.03□□□□□ -2.24
USP40-209ENST00000452724 UBL4BQ8N7F7 174 aa1.03□□□□□ -2.24
USP40-209ENST00000452724 TMEM161BQ8NDZ6 487 aa1.03□□□□□ -2.24
USP40-209ENST00000452724 EEF1AKMT1Q8WVE0 214 aa1.03□□□□□ -2.24
USP40-209ENST00000452724 GNPNAT1Q96EK6 184 aaPredicted RBP1.03□□□□□ -2.24
USP40-209ENST00000452724 CST9LQ9H4G1 147 aa1.03□□□□□ -2.24
USP40-209ENST00000452724 FKBP14Q9NWM8 211 aa1.03□□□□□ -2.24
USP40-209ENST00000452724 AK3Q9UIJ7 227 aa1.03□□□□□ -2.24
USP40-209ENST00000452724 C3orf18Q9UK00 162 aa1.03□□□□□ -2.24
USP40-209ENST00000452724 MAP3K5Q99683 1374 aa1.03□□□□□ -2.24
USP40-209ENST00000452724 C9orf84Q5VXU9 1444 aa1.03□□□□□ -2.24
USP40-209ENST00000452724 EIF4G1Q04637 1599 aaKnown RBP1.03□□□□□ -2.24
USP40-209ENST00000452724 IGHV1-69-2A0A0G2JMI3 117 aa1.02□□□□□ -2.25
USP40-209ENST00000452724 HMSDA8MTL9 139 aa1.02□□□□□ -2.25
USP40-209ENST00000452724 ACOX3O15254 700 aa1.02□□□□□ -2.25
USP40-209ENST00000452724 CREBL2O60519 120 aaPredicted RBP1.02□□□□□ -2.25
USP40-209ENST00000452724 DCTN3O75935 186 aa1.02□□□□□ -2.25
USP40-209ENST00000452724 CIAO1O76071 339 aa1.02□□□□□ -2.25
USP40-209ENST00000452724 LGALS1P09382 135 aaKnown RBP1.02□□□□□ -2.25
USP40-209ENST00000452724 BLVRAP53004 296 aa1.02□□□□□ -2.25
USP40-209ENST00000452724 NNATQ16517 81 aa1.02□□□□□ -2.25
USP40-209ENST00000452724 C5orf46Q6UWT4 87 aa1.02□□□□□ -2.25
USP40-209ENST00000452724 COMMD7Q86VX2 200 aa1.02□□□□□ -2.25
USP40-209ENST00000452724 IQCF2Q8IXL9 164 aa1.02□□□□□ -2.25
USP40-209ENST00000452724 C10orf67Q8IYJ2 551 aa1.02□□□□□ -2.25
USP40-209ENST00000452724 RAB8BQ92930 207 aa1.02□□□□□ -2.25
USP40-209ENST00000452724 ARL5BQ96KC2 179 aa1.02□□□□□ -2.25
USP40-209ENST00000452724 XAGE1AQ9HD64 81 aa1.02□□□□□ -2.25
USP40-209ENST00000452724 GPR84Q9NQS5 396 aa1.02□□□□□ -2.25
USP40-209ENST00000452724 RSL24D1Q9UHA3 163 aaKnown RBP1.02□□□□□ -2.25
USP40-209ENST00000452724 ANGPT4Q9Y264 503 aa1.02□□□□□ -2.25
USP40-209ENST00000452724 NOSIPQ9Y314 301 aaKnown RBP1.02□□□□□ -2.25
USP40-209ENST00000452724 SOX21Q9Y651 276 aaPredicted RBP1.02□□□□□ -2.25
USP40-209ENST00000452724 NUP160Q12769 1436 aa1.01□□□□□ -2.25
USP40-209ENST00000452724 KIF15Q9NS87 1388 aa1.01□□□□□ -2.25
USP40-209ENST00000452724 TRAV7A0A075B6U4 112 aa1.01□□□□□ -2.25
USP40-209ENST00000452724 IGKV3D-7A0A0C4DH55 119 aa1.01□□□□□ -2.25
USP40-209ENST00000452724 IGKV3OR2-268A0A0C4DH90 116 aa1.01□□□□□ -2.25
USP40-209ENST00000452724 C21orf140B9A014 251 aa1.01□□□□□ -2.25
USP40-209ENST00000452724 H3BT86 120 aa1.01□□□□□ -2.25
USP40-209ENST00000452724 H7C2G1 150 aa1.01□□□□□ -2.25
USP40-209ENST00000452724 COX7A2LO14548 114 aa1.01□□□□□ -2.25
USP40-209ENST00000452724 DEFA4P12838 97 aa1.01□□□□□ -2.25
USP40-209ENST00000452724 ALDH3A1P30838 453 aa1.01□□□□□ -2.25
USP40-209ENST00000452724 SLCO1A2P46721 670 aa1.01□□□□□ -2.25
USP40-209ENST00000452724 RPL28P46779 137 aaKnown RBP1.01□□□□□ -2.25
USP40-209ENST00000452724 TNFAIP6P98066 277 aaPredicted RBP1.01□□□□□ -2.25
USP40-209ENST00000452724 EMX1Q04741 257 aaPredicted RBP1.01□□□□□ -2.25
USP40-209ENST00000452724 LRRC75BQ2VPJ9 315 aa1.01□□□□□ -2.25
USP40-209ENST00000452724 LPCAT4Q643R3 524 aa1.01□□□□□ -2.25
USP40-209ENST00000452724 CD200R1LQ6Q8B3 271 aa1.01□□□□□ -2.25
USP40-209ENST00000452724 UNQ6190/PRO20217Q6UXQ8 127 aa1.01□□□□□ -2.25
USP40-209ENST00000452724 HIST2H3AQ71DI3 136 aa1.01□□□□□ -2.25
USP40-209ENST00000452724 SLC36A1Q7Z2H8 476 aa1.01□□□□□ -2.25
USP40-209ENST00000452724 ZNF550Q7Z398 422 aa1.01□□□□□ -2.25
USP40-209ENST00000452724 SLC22A24Q8N4F4 322 aa1.01□□□□□ -2.25
USP40-209ENST00000452724 OR2T27Q8NH04 317 aa1.01□□□□□ -2.25
USP40-209ENST00000452724 SGMS2Q8NHU3 365 aa1.01□□□□□ -2.25
USP40-209ENST00000452724 DDI1Q8WTU0 396 aa1.01□□□□□ -2.25
USP40-209ENST00000452724 TESCQ96BS2 214 aa1.01□□□□□ -2.25
USP40-209ENST00000452724 OPTNQ96CV9 577 aa1.01□□□□□ -2.25
USP40-209ENST00000452724 HRASLSQ9HDD0 168 aa1.01□□□□□ -2.25
USP40-209ENST00000452724 FREM1Q5H8C1 2179 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms