RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 LURAP1LQ8IV03 231 aa9.35□□□□□ -0.91
DDR1-239ENST00000452441 H1FOOQ8IZA3 346 aaPredicted RBP9.35□□□□□ -0.91
DDR1-239ENST00000452441 DERL1Q9BUN8 251 aa9.35□□□□□ -0.91
DDR1-239ENST00000452441 PARLQ9H300 379 aa9.35□□□□□ -0.91
DDR1-239ENST00000452441 DMRT1Q9Y5R6 373 aa9.35□□□□□ -0.91
DDR1-239ENST00000452441 TRGV10A0A0A0MS01 117 aa9.34□□□□□ -0.91
DDR1-239ENST00000452441 COX5BP10606 129 aa9.34□□□□□ -0.91
DDR1-239ENST00000452441 GAMTQ14353 236 aa9.34□□□□□ -0.91
DDR1-239ENST00000452441 ACOT6Q3I5F7 207 aaPredicted RBP9.34□□□□□ -0.91
DDR1-239ENST00000452441 PLA2G2CQ5R387 149 aa9.34□□□□□ -0.91
DDR1-239ENST00000452441 MRPS18CQ9Y3D5 142 aaKnown RBP9.34□□□□□ -0.91
DDR1-239ENST00000452441 A0A1B0GW64 132 aa9.34□□□□□ -0.91
DDR1-239ENST00000452441 LRRC30A6NM36 301 aa9.34□□□□□ -0.91
DDR1-239ENST00000452441 F6UZH7 168 aa9.34□□□□□ -0.91
DDR1-239ENST00000452441 LMO1P25800 156 aa9.34□□□□□ -0.91
DDR1-239ENST00000452441 FXYD3Q14802 87 aa9.34□□□□□ -0.91
DDR1-239ENST00000452441 KHDC3LQ587J8 217 aa9.34□□□□□ -0.91
DDR1-239ENST00000452441 DUX4L9Q6RFH8 374 aaPredicted RBP9.34□□□□□ -0.91
DDR1-239ENST00000452441 SSX7Q7RTT5 188 aa9.34□□□□□ -0.91
DDR1-239ENST00000452441 ODF3L1Q8IXM7 274 aa9.34□□□□□ -0.91
DDR1-239ENST00000452441 RPP25LQ8N5L8 163 aaKnown RBP9.34□□□□□ -0.91
DDR1-239ENST00000452441 FAM216BQ8N7L0 139 aa9.34□□□□□ -0.91
DDR1-239ENST00000452441 IMMP2LQ96T52 175 aa9.34□□□□□ -0.91
DDR1-239ENST00000452441 ZDHHC11Q9H8X9 412 aa9.34□□□□□ -0.91
DDR1-239ENST00000452441 PLSCR2Q9NRY7 297 aa9.34□□□□□ -0.91
DDR1-239ENST00000452441 DCAF16Q9NXF7 216 aa9.34□□□□□ -0.91
DDR1-239ENST00000452441 NCKAP5O14513 1909 aa9.34□□□□□ -0.91
DDR1-239ENST00000452441 SEC14L6B5MCN3 397 aa9.34□□□□□ -0.91
DDR1-239ENST00000452441 IGKV1-39P01597 117 aa9.34□□□□□ -0.91
DDR1-239ENST00000452441 IGKV1D-39P04432 117 aa9.34□□□□□ -0.91
DDR1-239ENST00000452441 MRPS11P82912 194 aaKnown RBP9.34□□□□□ -0.91
DDR1-239ENST00000452441 MOB1BQ7L9L4 216 aa9.34□□□□□ -0.91
DDR1-239ENST00000452441 TCF23Q7RTU1 214 aa9.34□□□□□ -0.91
DDR1-239ENST00000452441 SLC35E3Q7Z769 313 aa9.34□□□□□ -0.91
DDR1-239ENST00000452441 KIR3DL3Q8N743 410 aa9.34□□□□□ -0.91
DDR1-239ENST00000452441 ZNF525Q8N782 197 aa9.34□□□□□ -0.91
DDR1-239ENST00000452441 SAP30LQ9HAJ7 183 aa9.34□□□□□ -0.91
DDR1-239ENST00000452441 NAV2Q8IVL1 2488 aa9.34□□□□□ -0.91
DDR1-239ENST00000452441 A0A1B0GUS0 222 aa9.33□□□□□ -0.92
DDR1-239ENST00000452441 SLC17A3O00476 420 aa9.33□□□□□ -0.92
DDR1-239ENST00000452441 CD1BP29016 333 aa9.33□□□□□ -0.92
DDR1-239ENST00000452441 TMEM147Q9BVK8 224 aa9.33□□□□□ -0.92
DDR1-239ENST00000452441 WDR61Q9GZS3 305 aaKnown RBP9.33□□□□□ -0.92
DDR1-239ENST00000452441 C11orf1Q9H5F2 150 aa9.33□□□□□ -0.92
DDR1-239ENST00000452441 TRAPPC1Q9Y5R8 145 aa9.33□□□□□ -0.92
DDR1-239ENST00000452441 TRAV34A0A0B4J273 112 aa9.33□□□□□ -0.92
DDR1-239ENST00000452441 IGHV2OR16-5A0A0B4J2B6 119 aa9.33□□□□□ -0.92
DDR1-239ENST00000452441 ZNF729A6NN14 1252 aaPredicted RBP9.33□□□□□ -0.92
DDR1-239ENST00000452441 LINC00473A8K010 186 aa9.33□□□□□ -0.92
DDR1-239ENST00000452441 AHRRA9YTQ3 701 aa9.33□□□□□ -0.92
DDR1-239ENST00000452441 CD82P27701 267 aa9.33□□□□□ -0.92
DDR1-239ENST00000452441 PAX9P55771 341 aa9.33□□□□□ -0.92
DDR1-239ENST00000452441 DAZAP2Q15038 168 aaPredicted RBP9.33□□□□□ -0.92
DDR1-239ENST00000452441 PSG5Q15238 335 aa9.33□□□□□ -0.92
DDR1-239ENST00000452441 KCNIP4Q6PIL6 250 aa9.33□□□□□ -0.92
DDR1-239ENST00000452441 SGMS2Q8NHU3 365 aa9.33□□□□□ -0.92
DDR1-239ENST00000452441 C2CD3Q4AC94 2353 aa9.33□□□□□ -0.92
DDR1-239ENST00000452441 LOC102723971A0A1B0GUV8 181 aa9.33□□□□□ -0.92
DDR1-239ENST00000452441 C16orf97H3BN30 126 aa9.33□□□□□ -0.92
DDR1-239ENST00000452441 IFNL4K9M1U5 179 aa9.33□□□□□ -0.92
DDR1-239ENST00000452441 CCL21O00585 134 aa9.33□□□□□ -0.92
DDR1-239ENST00000452441 LY6HO94772 140 aa9.33□□□□□ -0.92
DDR1-239ENST00000452441 MLANAQ16655 118 aa9.33□□□□□ -0.92
DDR1-239ENST00000452441 MRPL54Q6P161 138 aaKnown RBP9.33□□□□□ -0.92
DDR1-239ENST00000452441 YPEL4Q96NS1 127 aa9.33□□□□□ -0.92
DDR1-239ENST00000452441 ZNF355PQ9NSJ1 428 aa9.33□□□□□ -0.92
DDR1-239ENST00000452441 ABCA12Q86UK0 2595 aa9.33□□□□□ -0.92
DDR1-239ENST00000452441 RRHO14718 337 aa9.32□□□□□ -0.92
DDR1-239ENST00000452441 MLNRO43193 412 aa9.32□□□□□ -0.92
DDR1-239ENST00000452441 GFRA3O60609 400 aa9.32□□□□□ -0.92
DDR1-239ENST00000452441 ORM2P19652 201 aa9.32□□□□□ -0.92
DDR1-239ENST00000452441 MRGPRGQ86SM5 289 aa9.32□□□□□ -0.92
DDR1-239ENST00000452441 RBMXL3Q8N7X1 1067 aaKnown RBP9.32□□□□□ -0.92
DDR1-239ENST00000452441 OR10A7Q8NGE5 316 aa9.32□□□□□ -0.92
DDR1-239ENST00000452441 UHRF2Q96PU4 802 aa9.32□□□□□ -0.92
DDR1-239ENST00000452441 PKIBQ9C010 78 aa9.32□□□□□ -0.92
DDR1-239ENST00000452441 COMMD5Q9GZQ3 224 aa9.32□□□□□ -0.92
DDR1-239ENST00000452441 SIRT7Q9NRC8 400 aa9.32□□□□□ -0.92
DDR1-239ENST00000452441 KIAA1549Q9HCM3 1950 aa9.32□□□□□ -0.92
DDR1-239ENST00000452441 FASNP49327 2511 aaKnown RBP9.32□□□□□ -0.92
DDR1-239ENST00000452441 A0A087WWC5 75 aa9.32□□□□□ -0.92
DDR1-239ENST00000452441 NKX6-3A6NJ46 265 aa9.32□□□□□ -0.92
DDR1-239ENST00000452441 ZNF585BQ52M93 769 aa9.32□□□□□ -0.92
DDR1-239ENST00000452441 C1orf185Q5T7R7 199 aa9.32□□□□□ -0.92
DDR1-239ENST00000452441 MOB3BQ86TA1 216 aa9.32□□□□□ -0.92
DDR1-239ENST00000452441 CNIH1O95406 144 aa9.32□□□□□ -0.92
DDR1-239ENST00000452441 PMCHP20382 165 aa9.32□□□□□ -0.92
DDR1-239ENST00000452441 HCP5Q6MZN7 132 aa9.32□□□□□ -0.92
DDR1-239ENST00000452441 ZNF645Q8N7E2 425 aa9.32□□□□□ -0.92
DDR1-239ENST00000452441 OR2T10Q8NGZ9 312 aa9.32□□□□□ -0.92
DDR1-239ENST00000452441 NEIL1Q96FI4 390 aaPredicted RBP9.32□□□□□ -0.92
DDR1-239ENST00000452441 DYSFO75923 2080 aa9.32□□□□□ -0.92
DDR1-239ENST00000452441 C1QTNF9P0C862 333 aa9.31□□□□□ -0.92
DDR1-239ENST00000452441 ARL14EPLP0DKL9 152 aa9.31□□□□□ -0.92
DDR1-239ENST00000452441 RPL29P47914 159 aaKnown RBP9.31□□□□□ -0.92
DDR1-239ENST00000452441 CAMPP49913 170 aa9.31□□□□□ -0.92
DDR1-239ENST00000452441 KRTDAPP60985 99 aa9.31□□□□□ -0.92
DDR1-239ENST00000452441 SUMO1P63165 101 aaKnown RBP9.31□□□□□ -0.92
DDR1-239ENST00000452441 OR5I1Q13606 314 aa9.31□□□□□ -0.92
DDR1-239ENST00000452441 ZNF600Q6ZNG1 722 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 194.3 ms