RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 TNFSF12O43508 249 aa9.5□□□□□ -0.89
CPSF4-208ENST00000452047 AIREO43918 545 aa9.5□□□□□ -0.89
CPSF4-208ENST00000452047 FCER2P06734 321 aa9.5□□□□□ -0.89
CPSF4-208ENST00000452047 IL6RP08887 468 aaPredicted RBP9.5□□□□□ -0.89
CPSF4-208ENST00000452047 ZNF735P0CB33 412 aa9.5□□□□□ -0.89
CPSF4-208ENST00000452047 RPS19P39019 145 aaKnown RBP9.5□□□□□ -0.89
CPSF4-208ENST00000452047 KIR2DS2P43631 304 aa9.5□□□□□ -0.89
CPSF4-208ENST00000452047 CBX5P45973 191 aa9.5□□□□□ -0.89
CPSF4-208ENST00000452047 RPEL1Q2QD12 228 aa9.5□□□□□ -0.89
CPSF4-208ENST00000452047 UBE2NLQ5JXB2 153 aa9.5□□□□□ -0.89
CPSF4-208ENST00000452047 C19orf35Q6ZS72 473 aa9.5□□□□□ -0.89
CPSF4-208ENST00000452047 NECAP1Q8NC96 275 aa9.5□□□□□ -0.89
CPSF4-208ENST00000452047 TSPAN14Q8NG11 270 aa9.5□□□□□ -0.89
CPSF4-208ENST00000452047 OR5AP2Q8NGF4 316 aa9.5□□□□□ -0.89
CPSF4-208ENST00000452047 SIGLEC8Q9NYZ4 499 aa9.5□□□□□ -0.89
CPSF4-208ENST00000452047 ANAPC10Q9UM13 185 aa9.5□□□□□ -0.89
CPSF4-208ENST00000452047 ZNF257Q9Y2Q1 563 aa9.5□□□□□ -0.89
CPSF4-208ENST00000452047 A0A087WXM4 84 aa9.49□□□□□ -0.89
CPSF4-208ENST00000452047 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.49□□□□□ -0.89
CPSF4-208ENST00000452047 MEIS3P1A6NDR6 274 aa9.49□□□□□ -0.89
CPSF4-208ENST00000452047 NPIPB5A8MRT5 1133 aa9.49□□□□□ -0.89
CPSF4-208ENST00000452047 TNFAIP8O95379 198 aa9.49□□□□□ -0.89
CPSF4-208ENST00000452047 HRASP01112 189 aa9.49□□□□□ -0.89
CPSF4-208ENST00000452047 CSN3P07498 182 aa9.49□□□□□ -0.89
CPSF4-208ENST00000452047 IGHV4-30-4P0DP06 118 aa9.49□□□□□ -0.89
CPSF4-208ENST00000452047 MAS1LP35410 378 aa9.49□□□□□ -0.89
CPSF4-208ENST00000452047 RPL27AP46776 148 aaKnown RBP9.49□□□□□ -0.89
CPSF4-208ENST00000452047 ATP5G2Q06055 141 aa9.49□□□□□ -0.89
CPSF4-208ENST00000452047 C15orf32Q32M92 178 aa9.49□□□□□ -0.89
CPSF4-208ENST00000452047 ZNF818PQ6ZRF7 136 aa9.49□□□□□ -0.89
CPSF4-208ENST00000452047 SSX9Q7RTT3 188 aa9.49□□□□□ -0.89
CPSF4-208ENST00000452047 SLC25A42Q86VD7 318 aa9.49□□□□□ -0.89
CPSF4-208ENST00000452047 SPAG16Q8N0X2 631 aa9.49□□□□□ -0.89
CPSF4-208ENST00000452047 ZBTB34Q8NCN2 500 aa9.49□□□□□ -0.89
CPSF4-208ENST00000452047 GIMAP1Q8WWP7 306 aa9.49□□□□□ -0.89
CPSF4-208ENST00000452047 S100A16Q96FQ6 103 aaKnown RBP9.49□□□□□ -0.89
CPSF4-208ENST00000452047 THAP7Q9BT49 309 aaPredicted RBP9.49□□□□□ -0.89
CPSF4-208ENST00000452047 SLC5A7Q9GZV3 580 aa9.49□□□□□ -0.89
CPSF4-208ENST00000452047 SLC2A9Q9NRM0 540 aa9.49□□□□□ -0.89
CPSF4-208ENST00000452047 BET1LQ9NYM9 111 aa9.49□□□□□ -0.89
CPSF4-208ENST00000452047 DMRT1Q9Y5R6 373 aa9.49□□□□□ -0.89
CPSF4-208ENST00000452047 CSMD3Q7Z407 3707 aa9.48□□□□□ -0.89
CPSF4-208ENST00000452047 CGB1A6NKQ9 187 aa9.48□□□□□ -0.89
CPSF4-208ENST00000452047 A8MZ25 164 aa9.48□□□□□ -0.89
CPSF4-208ENST00000452047 SULT1C2O00338 296 aa9.48□□□□□ -0.89
CPSF4-208ENST00000452047 OR2J3O76001 311 aa9.48□□□□□ -0.89
CPSF4-208ENST00000452047 CRYGCP07315 174 aa9.48□□□□□ -0.89
CPSF4-208ENST00000452047 MYOD1P15172 320 aa9.48□□□□□ -0.89
CPSF4-208ENST00000452047 AREGP15514 252 aa9.48□□□□□ -0.89
CPSF4-208ENST00000452047 MECP2P51608 486 aaKnown RBP9.48□□□□□ -0.89
CPSF4-208ENST00000452047 FXYD4P59646 89 aa9.48□□□□□ -0.89
CPSF4-208ENST00000452047 LSM3P62310 102 aaKnown RBP9.48□□□□□ -0.89
CPSF4-208ENST00000452047 RPL8P62917 257 aaKnown RBP9.48□□□□□ -0.89
CPSF4-208ENST00000452047 POU2AF1Q16633 256 aa9.48□□□□□ -0.89
CPSF4-208ENST00000452047 TATDN3Q17R31 274 aa9.48□□□□□ -0.89
CPSF4-208ENST00000452047 KLK9Q2XQG4 91 aa9.48□□□□□ -0.89
CPSF4-208ENST00000452047 OR4A47Q6IF82 309 aa9.48□□□□□ -0.89
CPSF4-208ENST00000452047 TMEM17Q86X19 198 aa9.48□□□□□ -0.89
CPSF4-208ENST00000452047 SAMD12Q8N8I0 201 aa9.48□□□□□ -0.89
CPSF4-208ENST00000452047 RCHY1Q96PM5 261 aa9.48□□□□□ -0.89
CPSF4-208ENST00000452047 FANCD2OSQ96PS1 177 aa9.48□□□□□ -0.89
CPSF4-208ENST00000452047 VCX3AQ9NNX9 186 aa9.48□□□□□ -0.89
CPSF4-208ENST00000452047 C19orf73Q9NVV2 129 aa9.48□□□□□ -0.89
CPSF4-208ENST00000452047 KLK9Q9UKQ9 250 aa9.48□□□□□ -0.89
CPSF4-208ENST00000452047 H0Y980 276 aa9.47□□□□□ -0.89
CPSF4-208ENST00000452047 CTRB1P17538 263 aa9.47□□□□□ -0.89
CPSF4-208ENST00000452047 HLA-GP17693 338 aa9.47□□□□□ -0.89
CPSF4-208ENST00000452047 NAT1P18440 290 aa9.47□□□□□ -0.89
CPSF4-208ENST00000452047 PSMB6P28072 239 aa9.47□□□□□ -0.89
CPSF4-208ENST00000452047 GNRHRP30968 328 aa9.47□□□□□ -0.89
CPSF4-208ENST00000452047 TAS2R31P59538 309 aa9.47□□□□□ -0.89
CPSF4-208ENST00000452047 TAS2R20P59543 309 aa9.47□□□□□ -0.89
CPSF4-208ENST00000452047 CATR1Q13166 79 aa9.47□□□□□ -0.89
CPSF4-208ENST00000452047 FAM209BQ5JX69 171 aa9.47□□□□□ -0.89
CPSF4-208ENST00000452047 TMEM69Q5SWH9 247 aa9.47□□□□□ -0.89
CPSF4-208ENST00000452047 CTRB2Q6GPI1 263 aa9.47□□□□□ -0.89
CPSF4-208ENST00000452047 DHRS11Q6UWP2 260 aa9.47□□□□□ -0.89
CPSF4-208ENST00000452047 ADAMTSL5Q6ZMM2 481 aa9.47□□□□□ -0.89
CPSF4-208ENST00000452047 OR4A5Q8NH83 315 aa9.47□□□□□ -0.89
CPSF4-208ENST00000452047 SLC25A46Q96AG3 418 aa9.47□□□□□ -0.89
CPSF4-208ENST00000452047 CCDC140Q96MF4 163 aa9.47□□□□□ -0.89
CPSF4-208ENST00000452047 FYTTD1Q96QD9 318 aaKnown RBP9.47□□□□□ -0.89
CPSF4-208ENST00000452047 IFT46Q9NQC8 304 aa9.47□□□□□ -0.89
CPSF4-208ENST00000452047 EHFQ9NZC4 300 aa9.47□□□□□ -0.89
CPSF4-208ENST00000452047 IZUMO1RA6ND01 250 aa9.46□□□□□ -0.9
CPSF4-208ENST00000452047 PPP5D1E7EU14 171 aa9.46□□□□□ -0.9
CPSF4-208ENST00000452047 HPRT1P00492 218 aa9.46□□□□□ -0.9
CPSF4-208ENST00000452047 EIF4EP06730 217 aaKnown RBP9.46□□□□□ -0.9
CPSF4-208ENST00000452047 FGF2P09038 288 aa9.46□□□□□ -0.9
CPSF4-208ENST00000452047 NQO2P16083 231 aa9.46□□□□□ -0.9
CPSF4-208ENST00000452047 RPL5P46777 297 aaKnown RBP9.46□□□□□ -0.9
CPSF4-208ENST00000452047 RFX2P48378 723 aa9.46□□□□□ -0.9
CPSF4-208ENST00000452047 OR2B8PP59922 312 aa9.46□□□□□ -0.9
CPSF4-208ENST00000452047 HERV-K104P61576 105 aa9.46□□□□□ -0.9
CPSF4-208ENST00000452047 LCN12Q6JVE5 192 aa9.46□□□□□ -0.9
CPSF4-208ENST00000452047 Q8N402 240 aa9.46□□□□□ -0.9
CPSF4-208ENST00000452047 OR51H1Q8NH63 302 aa9.46□□□□□ -0.9
CPSF4-208ENST00000452047 MOB3AQ96BX8 217 aa9.46□□□□□ -0.9
CPSF4-208ENST00000452047 KCTD12Q96CX2 325 aaKnown RBP9.46□□□□□ -0.9
CPSF4-208ENST00000452047 TM2D3Q9BRN9 247 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms