RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 SAP25Q8TEE9 199 aa9.59□□□□□ -0.87
SCN4A-201ENST00000435607 MARVELD1Q9BSK0 173 aa9.59□□□□□ -0.87
SCN4A-201ENST00000435607 SPTBN2O15020 2390 aa9.59□□□□□ -0.87
SCN4A-201ENST00000435607 F8WEM9 126 aa9.59□□□□□ -0.87
SCN4A-201ENST00000435607 RNASE4P34096 147 aaKnown RBP9.59□□□□□ -0.87
SCN4A-201ENST00000435607 GPX4P36969 197 aaPredicted RBP9.59□□□□□ -0.87
SCN4A-201ENST00000435607 AURKAIP1Q9NWT8 199 aaPredicted RBP9.59□□□□□ -0.87
SCN4A-201ENST00000435607 CEP290O15078 2479 aa9.58□□□□□ -0.88
SCN4A-201ENST00000435607 MARCH11A6NNE9 402 aa9.58□□□□□ -0.88
SCN4A-201ENST00000435607 IGFBP6P24592 240 aaPredicted RBP9.58□□□□□ -0.88
SCN4A-201ENST00000435607 CA7P43166 264 aa9.58□□□□□ -0.88
SCN4A-201ENST00000435607 PSMG4Q5JS54 123 aa9.58□□□□□ -0.88
SCN4A-201ENST00000435607 ALG14Q96F25 216 aa9.58□□□□□ -0.88
SCN4A-201ENST00000435607 SPAG8Q99932 426 aaPredicted RBP9.58□□□□□ -0.88
SCN4A-201ENST00000435607 MOSPD3O75425 235 aa9.58□□□□□ -0.88
SCN4A-201ENST00000435607 STPG2Q8N412 459 aa9.58□□□□□ -0.88
SCN4A-201ENST00000435607 TYMSP04818 313 aa9.58□□□□□ -0.88
SCN4A-201ENST00000435607 VSIG8P0DPA2 414 aa9.58□□□□□ -0.88
SCN4A-201ENST00000435607 TGIF1Q15583 401 aa9.58□□□□□ -0.88
SCN4A-201ENST00000435607 FDCSPQ8NFU4 85 aa9.58□□□□□ -0.88
SCN4A-201ENST00000435607 MBD3L1Q8WWY6 194 aa9.58□□□□□ -0.88
SCN4A-201ENST00000435607 TMEM160Q9NX00 188 aa9.58□□□□□ -0.88
SCN4A-201ENST00000435607 MRPL16Q9NX20 251 aaKnown RBP9.58□□□□□ -0.88
SCN4A-201ENST00000435607 NTN1O95631 604 aa9.58□□□□□ -0.88
SCN4A-201ENST00000435607 PRR13Q9NZ81 148 aa9.58□□□□□ -0.88
SCN4A-201ENST00000435607 ZNF883P0CG24 379 aa9.58□□□□□ -0.88
SCN4A-201ENST00000435607 FGFRL1Q8N441 504 aa9.58□□□□□ -0.88
SCN4A-201ENST00000435607 VCX2Q9H322 139 aa9.58□□□□□ -0.88
SCN4A-201ENST00000435607 C21orf62Q9NYP8 219 aa9.58□□□□□ -0.88
SCN4A-201ENST00000435607 A0A087WX48 190 aa9.58□□□□□ -0.88
SCN4A-201ENST00000435607 SPINT1O43278 529 aa9.58□□□□□ -0.88
SCN4A-201ENST00000435607 SPATA45Q537H7 98 aa9.58□□□□□ -0.88
SCN4A-201ENST00000435607 SCGB3A1Q96QR1 104 aa9.58□□□□□ -0.88
SCN4A-201ENST00000435607 S100A7L2Q5SY68 101 aa9.57□□□□□ -0.88
SCN4A-201ENST00000435607 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.57□□□□□ -0.88
SCN4A-201ENST00000435607 SOD3P08294 240 aa9.57□□□□□ -0.88
SCN4A-201ENST00000435607 CKS1BP61024 79 aa9.57□□□□□ -0.88
SCN4A-201ENST00000435607 SLC25A34Q6PIV7 304 aa9.57□□□□□ -0.88
SCN4A-201ENST00000435607 WDR82Q6UXN9 313 aa9.57□□□□□ -0.88
SCN4A-201ENST00000435607 OR2K2Q8NGT1 345 aa9.57□□□□□ -0.88
SCN4A-201ENST00000435607 HIST1H2BAQ96A08 127 aa9.57□□□□□ -0.88
SCN4A-201ENST00000435607 PROB1E7EW31 1015 aa9.57□□□□□ -0.88
SCN4A-201ENST00000435607 HRKO00198 91 aa9.57□□□□□ -0.88
SCN4A-201ENST00000435607 MOSP00540 346 aa9.57□□□□□ -0.88
SCN4A-201ENST00000435607 ZXDCQ2QGD7 858 aaPredicted RBP9.57□□□□□ -0.88
SCN4A-201ENST00000435607 FAM206AQ9NX38 181 aa9.57□□□□□ -0.88
SCN4A-201ENST00000435607 DOCK7Q96N67 2140 aa9.57□□□□□ -0.88
SCN4A-201ENST00000435607 INSL4Q14641 139 aa9.57□□□□□ -0.88
SCN4A-201ENST00000435607 VAX1Q5SQQ9 334 aa9.57□□□□□ -0.88
SCN4A-201ENST00000435607 LINC00305Q7Z4B0 112 aa9.57□□□□□ -0.88
SCN4A-201ENST00000435607 FAM181AQ8N9Y4 354 aa9.57□□□□□ -0.88
SCN4A-201ENST00000435607 TMEM222Q9H0R3 208 aa9.57□□□□□ -0.88
SCN4A-201ENST00000435607 DLL3Q9NYJ7 618 aa9.57□□□□□ -0.88
SCN4A-201ENST00000435607 PLXNB2O15031 1838 aa9.57□□□□□ -0.88
SCN4A-201ENST00000435607 NHSQ6T4R5 1651 aa9.57□□□□□ -0.88
SCN4A-201ENST00000435607 SMIM13P0DJ93 91 aa9.57□□□□□ -0.88
SCN4A-201ENST00000435607 MIC13Q5XKP0 118 aa9.57□□□□□ -0.88
SCN4A-201ENST00000435607 CST9LQ9H4G1 147 aa9.57□□□□□ -0.88
SCN4A-201ENST00000435607 CBLN4Q9NTU7 201 aa9.57□□□□□ -0.88
SCN4A-201ENST00000435607 POLEQ07864 2286 aa9.57□□□□□ -0.88
SCN4A-201ENST00000435607 ARL14EPLP0DKL9 152 aa9.57□□□□□ -0.88
SCN4A-201ENST00000435607 GPR183P32249 361 aa9.57□□□□□ -0.88
SCN4A-201ENST00000435607 MEF2BQ02080 365 aaPredicted RBP9.57□□□□□ -0.88
SCN4A-201ENST00000435607 UNC119Q13432 240 aa9.57□□□□□ -0.88
SCN4A-201ENST00000435607 KIAA0040Q15053 153 aa9.57□□□□□ -0.88
SCN4A-201ENST00000435607 UBE2V2Q15819 145 aa9.57□□□□□ -0.88
SCN4A-201ENST00000435607 TNFRSF12AQ9NP84 129 aa9.57□□□□□ -0.88
SCN4A-201ENST00000435607 RRHO14718 337 aa9.56□□□□□ -0.88
SCN4A-201ENST00000435607 GATAD1Q8WUU5 269 aa9.56□□□□□ -0.88
SCN4A-201ENST00000435607 TAF15Q92804 592 aaKnown RBP eCLIP9.56□□□□□ -0.88
SCN4A-201ENST00000435607 HSPB9Q9BQS6 159 aa9.56□□□□□ -0.88
SCN4A-201ENST00000435607 C7orf77A4D0Y5 90 aa9.56□□□□□ -0.88
SCN4A-201ENST00000435607 SCTP09683 121 aa9.56□□□□□ -0.88
SCN4A-201ENST00000435607 IFI27P40305 119 aaPredicted RBP9.56□□□□□ -0.88
SCN4A-201ENST00000435607 IGSF11Q5DX21 431 aa9.56□□□□□ -0.88
SCN4A-201ENST00000435607 FAM169BQ8N8A8 192 aa9.56□□□□□ -0.88
SCN4A-201ENST00000435607 OSR1Q8TAX0 266 aaPredicted RBP9.56□□□□□ -0.88
SCN4A-201ENST00000435607 BSPH1Q075Z2 132 aa9.56□□□□□ -0.88
SCN4A-201ENST00000435607 CLEC19AQ6UXS0 136 aa9.56□□□□□ -0.88
SCN4A-201ENST00000435607 SPTBN1Q01082 2364 aaKnown RBP9.56□□□□□ -0.88
SCN4A-201ENST00000435607 TNFRSF9Q07011 255 aa9.56□□□□□ -0.88
SCN4A-201ENST00000435607 ZNF818PQ6ZRF7 136 aa9.56□□□□□ -0.88
SCN4A-201ENST00000435607 FANCMQ8IYD8 2048 aa9.56□□□□□ -0.88
SCN4A-201ENST00000435607 TRAV24A0A0B4J272 114 aa9.56□□□□□ -0.88
SCN4A-201ENST00000435607 LINC00587B1AMM8 73 aa9.56□□□□□ -0.88
SCN4A-201ENST00000435607 PEX11BO96011 259 aa9.56□□□□□ -0.88
SCN4A-201ENST00000435607 RPL32P62910 135 aaKnown RBP9.56□□□□□ -0.88
SCN4A-201ENST00000435607 ZNF414Q96IQ9 312 aa9.56□□□□□ -0.88
SCN4A-201ENST00000435607 DICER1Q9UPY3 1922 aaKnown RBP9.56□□□□□ -0.88
SCN4A-201ENST00000435607 TRGV11A0A075B6L2 103 aa9.56□□□□□ -0.88
SCN4A-201ENST00000435607 IGHV3-35A0A0C4DH35 117 aa9.56□□□□□ -0.88
SCN4A-201ENST00000435607 FOXS1O43638 330 aa9.56□□□□□ -0.88
SCN4A-201ENST00000435607 CD5P06127 495 aa9.56□□□□□ -0.88
SCN4A-201ENST00000435607 ICAM4Q14773 271 aa9.56□□□□□ -0.88
SCN4A-201ENST00000435607 CYB5R2Q6BCY4 276 aa9.56□□□□□ -0.88
SCN4A-201ENST00000435607 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.56□□□□□ -0.88
SCN4A-201ENST00000435607 OR5AN1Q8NGI8 311 aa9.56□□□□□ -0.88
SCN4A-201ENST00000435607 RNF114Q9Y508 228 aa9.56□□□□□ -0.88
SCN4A-201ENST00000435607 A0A1W2PQF6 199 aa9.55□□□□□ -0.88
SCN4A-201ENST00000435607 ADARB2-AS1A8MUL3 147 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms