RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 RHBDD2Q6NTF9 364 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 OR2Y1Q8NGV0 311 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 ST8SIA1Q92185 356 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 QTRT1Q9BXR0 403 aaKnown RBP6.3□□□□□ -1.4
CPSF6-202ENST00000435070 DEPPQ9NTK1 212 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 PRRG2O14669 202 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 MMD2Q8IY49 270 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 ZNF488Q96MN9 340 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 REPIN1Q9BWE0 567 aaKnown RBP6.3□□□□□ -1.4
CPSF6-202ENST00000435070 ARRDC1-AS1Q9H2J1 176 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 CPAMD8Q8IZJ3 1885 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 GAGE12BA1L429 117 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 BCL3P20749 454 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 ZNF841Q6ZN19 808 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 SARAFQ96BY9 339 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 ONECUT1Q9UBC0 465 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 FRYQ5TBA9 3013 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 ZNF324O75467 553 aaPredicted RBP6.3□□□□□ -1.4
CPSF6-202ENST00000435070 MNX1P50219 401 aaPredicted RBP6.3□□□□□ -1.4
CPSF6-202ENST00000435070 TMEM92Q6UXU6 159 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 UCN2Q96RP3 112 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 MCRIP2Q9BUT9 160 aaKnown RBP6.3□□□□□ -1.4
CPSF6-202ENST00000435070 THSD7BQ9C0I4 1608 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 ATG2AQ2TAZ0 1938 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 SVILO95425 2214 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 ZNF816Q0VGE8 651 aaPredicted RBP6.3□□□□□ -1.4
CPSF6-202ENST00000435070 ACSF3Q4G176 576 aaPredicted RBP6.3□□□□□ -1.4
CPSF6-202ENST00000435070 OR10P1Q8NGE3 313 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 PLA2G2FQ9BZM2 168 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 MUC21A0A0G2JKD1 596 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 IGHV1-69-2A0A0G2JMI3 117 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 MUC21A0A140T8X8 626 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 IGLC7A0M8Q6 106 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 A6NDN8 102 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 K7EQM0 130 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 CYB561P49447 251 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 PSG7Q13046 419 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 MUC21Q5SSG8 566 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 C20orf204Q6ZNR8 217 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 VASH2Q86V25 355 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 RAB37Q96AX2 223 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 IL36GQ9NZH8 169 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 NBEAQ8NFP9 2946 aa6.3□□□□□ -1.4
CPSF6-202ENST00000435070 CEP290O15078 2479 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 SNAI2O43623 268 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 CA7P43166 264 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 NEUROG1Q92886 237 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 IL36BQ9NZH7 164 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 MED12LQ86YW9 2145 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 OR5B21A6NL26 309 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 SPINT2O43291 252 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 S1PR2O95136 353 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 TNFSF15O95150 251 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 VAMP5O95183 116 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 IGFBP7Q16270 282 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 LHFPL2Q6ZUX7 228 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 DOLPP1Q86YN1 238 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 STPG3Q8N7X2 389 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 SPPL3Q8TCT6 385 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 OXGR1Q96P68 337 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 NCOR1P1Q9H4R4 102 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 UBE2ZQ9H832 354 aaPredicted RBP6.29□□□□□ -1.4
CPSF6-202ENST00000435070 CHTOPQ9Y3Y2 248 aaKnown RBP6.29□□□□□ -1.4
CPSF6-202ENST00000435070 WDFY3Q8IZQ1 3526 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 DHHO43323 396 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 MMP23AO75900 390 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 YRDCQ86U90 279 aaKnown RBP6.29□□□□□ -1.4
CPSF6-202ENST00000435070 ZIC4Q8N9L1 334 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 PROCRQ9UNN8 238 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 R4GN57 208 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 IGHV2-26A0A0B4J1V2 119 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 ZG16O60844 167 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 GCSHP23434 173 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 NPCDR1Q9BY65 106 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 RNASE7Q9H1E1 156 aaKnown RBP6.29□□□□□ -1.4
CPSF6-202ENST00000435070 GP6Q9HCN6 339 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 MRPS16Q9Y3D3 137 aaKnown RBP6.29□□□□□ -1.4
CPSF6-202ENST00000435070 DOCK10Q96BY6 2186 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 CELSR3Q9NYQ7 3312 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 J3QW42 95 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 CA1P00915 261 aaPredicted RBP6.29□□□□□ -1.4
CPSF6-202ENST00000435070 ARL14EPLP0DKL9 152 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 B4GALT1P15291 398 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 CTSSP25774 331 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 RPL31P62899 125 aaKnown RBP6.29□□□□□ -1.4
CPSF6-202ENST00000435070 ZNF324BQ6AW86 544 aaPredicted RBP6.29□□□□□ -1.4
CPSF6-202ENST00000435070 SLC22A18ASQ8N1D0 253 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 KCNS1Q96KK3 526 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 TMEM147Q9BVK8 224 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 CLEC5AQ9NY25 188 aa6.29□□□□□ -1.4
CPSF6-202ENST00000435070 IGLV3-1P01715 115 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 GATA2P23769 480 aaPredicted RBP6.28□□□□□ -1.4
CPSF6-202ENST00000435070 LHFPL4Q7Z7J7 247 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 FGFRL1Q8N441 504 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 OR10G3Q8NGC4 313 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 OR52L2PQ8NGH6 319 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 CLDN23Q96B33 292 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 TAX1BP3O14907 124 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 GNG7O60262 68 aa6.28□□□□□ -1.4
CPSF6-202ENST00000435070 EPHA8P29322 1005 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms