RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 AHRRA9YTQ3 701 aa9.76□□□□□ -0.85
CD44-209ENST00000433892 M0R1B8 84 aa9.76□□□□□ -0.85
CD44-209ENST00000433892 SPRY3O43610 288 aa9.76□□□□□ -0.85
CD44-209ENST00000433892 GFRA3O60609 400 aa9.76□□□□□ -0.85
CD44-209ENST00000433892 VENTXO95231 258 aa9.76□□□□□ -0.85
CD44-209ENST00000433892 RPP30P78346 268 aaKnown RBP9.76□□□□□ -0.85
CD44-209ENST00000433892 OR2T10Q8NGZ9 312 aa9.76□□□□□ -0.85
CD44-209ENST00000433892 PPP1R35Q8TAP8 253 aa9.76□□□□□ -0.85
CD44-209ENST00000433892 TMEM170AQ8WVE7 144 aa9.76□□□□□ -0.85
CD44-209ENST00000433892 S100PBPQ96BU1 408 aa9.76□□□□□ -0.85
CD44-209ENST00000433892 MGST2Q99735 147 aa9.76□□□□□ -0.85
CD44-209ENST00000433892 TMEM204Q9BSN7 226 aa9.76□□□□□ -0.85
CD44-209ENST00000433892 MS4A5Q9H3V2 200 aa9.76□□□□□ -0.85
CD44-209ENST00000433892 CALYQ9NYX4 217 aa9.76□□□□□ -0.85
CD44-209ENST00000433892 TET2Q6N021 2002 aaPredicted RBP9.75□□□□□ -0.85
CD44-209ENST00000433892 OTOGLQ3ZCN5 2332 aa9.75□□□□□ -0.85
CD44-209ENST00000433892 XKRY2A2RUG3 117 aa9.75□□□□□ -0.85
CD44-209ENST00000433892 PGPEP1LA6NFU8 196 aa9.75□□□□□ -0.85
CD44-209ENST00000433892 FAM90A9PA6NNJ1 464 aa9.75□□□□□ -0.85
CD44-209ENST00000433892 F2RL2O00254 374 aa9.75□□□□□ -0.85
CD44-209ENST00000433892 PDE6DO43924 150 aa9.75□□□□□ -0.85
CD44-209ENST00000433892 LY86O95711 162 aa9.75□□□□□ -0.85
CD44-209ENST00000433892 FTH1P19P0C7X4 201 aa9.75□□□□□ -0.85
CD44-209ENST00000433892 FAM3BP58499 235 aaPredicted RBP9.75□□□□□ -0.85
CD44-209ENST00000433892 PDLIM3Q53GG5 364 aaPredicted RBP9.75□□□□□ -0.85
CD44-209ENST00000433892 MIC13Q5XKP0 118 aa9.75□□□□□ -0.85
CD44-209ENST00000433892 LINC01551Q86U37 167 aa9.75□□□□□ -0.85
CD44-209ENST00000433892 OR1P1Q8NH06 330 aa9.75□□□□□ -0.85
CD44-209ENST00000433892 TMEM37Q8WXS4 190 aa9.75□□□□□ -0.85
CD44-209ENST00000433892 FUT9Q9Y231 359 aa9.75□□□□□ -0.85
CD44-209ENST00000433892 PXMP4Q9Y6I8 212 aa9.75□□□□□ -0.85
CD44-209ENST00000433892 PRSS46E5RG02 174 aa9.75□□□□□ -0.85
CD44-209ENST00000433892 RBFOX2O43251 390 aaKnown RBP eCLIP9.75□□□□□ -0.85
CD44-209ENST00000433892 MPDU1O75352 247 aa9.75□□□□□ -0.85
CD44-209ENST00000433892 ARL14EPLP0DKL9 152 aa9.75□□□□□ -0.85
CD44-209ENST00000433892 OPRK1P41145 380 aa9.75□□□□□ -0.85
CD44-209ENST00000433892 PRSS8Q16651 343 aa9.75□□□□□ -0.85
CD44-209ENST00000433892 CR1LQ2VPA4 569 aa9.75□□□□□ -0.85
CD44-209ENST00000433892 C1orf174Q8IYL3 243 aa9.75□□□□□ -0.85
CD44-209ENST00000433892 OR52E5Q8NH55 327 aa9.75□□□□□ -0.85
CD44-209ENST00000433892 SSMEM1Q8WWF3 244 aa9.75□□□□□ -0.85
CD44-209ENST00000433892 RAB1CQ92928 201 aa9.75□□□□□ -0.85
CD44-209ENST00000433892 GGTLC1Q9BX51 225 aa9.75□□□□□ -0.85
CD44-209ENST00000433892 TCF19Q9Y242 345 aa9.75□□□□□ -0.85
CD44-209ENST00000433892 CEP250Q9BV73 2442 aa9.74□□□□□ -0.85
CD44-209ENST00000433892 DMXL2Q8TDJ6 3036 aa9.74□□□□□ -0.85
CD44-209ENST00000433892 ATMQ13315 3056 aa9.74□□□□□ -0.85
CD44-209ENST00000433892 ADGRG4Q8IZF6 3080 aa9.74□□□□□ -0.85
CD44-209ENST00000433892 GGCTO75223 188 aaKnown RBP9.74□□□□□ -0.85
CD44-209ENST00000433892 NDUFS6O75380 124 aaKnown RBP9.74□□□□□ -0.85
CD44-209ENST00000433892 AMBPP02760 352 aa9.74□□□□□ -0.85
CD44-209ENST00000433892 COL8A2P25067 703 aa9.74□□□□□ -0.85
CD44-209ENST00000433892 CFHR2P36980 270 aa9.74□□□□□ -0.85
CD44-209ENST00000433892 DUX4L9Q6RFH8 374 aaPredicted RBP9.74□□□□□ -0.85
CD44-209ENST00000433892 PIP4P1Q86T03 277 aa9.74□□□□□ -0.85
CD44-209ENST00000433892 ZNF114Q8NC26 417 aa9.74□□□□□ -0.85
CD44-209ENST00000433892 RHOVQ96L33 236 aa9.74□□□□□ -0.85
CD44-209ENST00000433892 DCHS1Q96JQ0 3298 aa9.74□□□□□ -0.85
CD44-209ENST00000433892 PLCE1Q9P212 2302 aa9.74□□□□□ -0.85
CD44-209ENST00000433892 C1QTNF9P0C862 333 aa9.73□□□□□ -0.85
CD44-209ENST00000433892 SRP14P37108 136 aaKnown RBP9.73□□□□□ -0.85
CD44-209ENST00000433892 NUBP1P53384 320 aa9.73□□□□□ -0.85
CD44-209ENST00000433892 KLF3P57682 345 aaPredicted RBP9.73□□□□□ -0.85
CD44-209ENST00000433892 DEFA6Q01524 100 aa9.73□□□□□ -0.85
CD44-209ENST00000433892 CT45A1Q5HYN5 189 aa9.73□□□□□ -0.85
CD44-209ENST00000433892 FAM78BQ5VT40 261 aa9.73□□□□□ -0.85
CD44-209ENST00000433892 ZNF474Q6S9Z5 364 aaPredicted RBP9.73□□□□□ -0.85
CD44-209ENST00000433892 RPRMLQ8N4K4 120 aa9.73□□□□□ -0.85
CD44-209ENST00000433892 CT45A3Q8NHU0 189 aa9.73□□□□□ -0.85
CD44-209ENST00000433892 ITLN1Q8WWA0 313 aa9.73□□□□□ -0.85
CD44-209ENST00000433892 DDB2Q92466 427 aa9.73□□□□□ -0.85
CD44-209ENST00000433892 C1orf159Q96HA4 380 aa9.73□□□□□ -0.85
CD44-209ENST00000433892 PRO1933Q9H354 126 aa9.73□□□□□ -0.85
CD44-209ENST00000433892 KCNIP2Q9NS61 270 aa9.73□□□□□ -0.85
CD44-209ENST00000433892 LHBP01229 141 aa9.73□□□□□ -0.85
CD44-209ENST00000433892 TMPRSS3P57727 454 aa9.73□□□□□ -0.85
CD44-209ENST00000433892 C17orf58Q2M2W7 97 aa9.73□□□□□ -0.85
CD44-209ENST00000433892 TMEM249Q2WGJ8 235 aa9.73□□□□□ -0.85
CD44-209ENST00000433892 ACTL10Q5JWF8 245 aa9.73□□□□□ -0.85
CD44-209ENST00000433892 FAM169BQ8N8A8 192 aa9.73□□□□□ -0.85
CD44-209ENST00000433892 OR4S2Q8NH73 311 aa9.73□□□□□ -0.85
CD44-209ENST00000433892 DSCAMO60469 2012 aa9.73□□□□□ -0.85
CD44-209ENST00000433892 TRBV20OR9-2A0A075B6H5 130 aa9.72□□□□□ -0.85
CD44-209ENST00000433892 SAA2-SAA4A0A096LPE2 208 aa9.72□□□□□ -0.85
CD44-209ENST00000433892 MBD3L4A6NDZ8 208 aaPredicted RBP9.72□□□□□ -0.85
CD44-209ENST00000433892 MBD3L3A6NE82 208 aaPredicted RBP9.72□□□□□ -0.85
CD44-209ENST00000433892 MBD3L5A6NJ08 208 aaPredicted RBP9.72□□□□□ -0.85
CD44-209ENST00000433892 TMPRSS2O15393 492 aa9.72□□□□□ -0.85
CD44-209ENST00000433892 STAG3L2P0CL84 134 aa9.72□□□□□ -0.85
CD44-209ENST00000433892 STAG3L3P0CL85 134 aa9.72□□□□□ -0.85
CD44-209ENST00000433892 SAA2P0DJI9 122 aaPredicted RBP9.72□□□□□ -0.85
CD44-209ENST00000433892 CGB3P0DN86 165 aa9.72□□□□□ -0.85
CD44-209ENST00000433892 CGB7P0DN87 165 aa9.72□□□□□ -0.85
CD44-209ENST00000433892 MYOD1P15172 320 aa9.72□□□□□ -0.85
CD44-209ENST00000433892 KCNIP4Q6PIL6 250 aa9.72□□□□□ -0.85
CD44-209ENST00000433892 DEFB108BQ8NET1 73 aa9.72□□□□□ -0.85
CD44-209ENST00000433892 MBD3L2Q8NHZ7 208 aaPredicted RBP9.72□□□□□ -0.85
CD44-209ENST00000433892 C15orf61A6NNL5 157 aa9.72□□□□□ -0.85
CD44-209ENST00000433892 GATCO43716 136 aaKnown RBP9.72□□□□□ -0.85
CD44-209ENST00000433892 SOX15O60248 233 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms