RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 ZNF418Q8TF45 676 aaPredicted RBP10.85□□□□□ -0.67
PTCH1-207ENST00000429896 Q8WTZ3 238 aa10.85□□□□□ -0.67
PTCH1-207ENST00000429896 METTL1Q9UBP6 276 aaKnown RBP10.85□□□□□ -0.67
PTCH1-207ENST00000429896 ZNF250P15622 560 aa10.85□□□□□ -0.67
PTCH1-207ENST00000429896 BTF3P20290 206 aaKnown RBP10.85□□□□□ -0.67
PTCH1-207ENST00000429896 HCP5Q6MZN7 132 aa10.85□□□□□ -0.67
PTCH1-207ENST00000429896 TBX15Q96SF7 602 aa10.85□□□□□ -0.67
PTCH1-207ENST00000429896 TM2D1Q9BX74 207 aa10.85□□□□□ -0.67
PTCH1-207ENST00000429896 SLC16A13Q7RTY0 426 aa10.85□□□□□ -0.67
PTCH1-207ENST00000429896 SLC25A38Q96DW6 304 aa10.85□□□□□ -0.67
PTCH1-207ENST00000429896 REG1AP05451 166 aa10.85□□□□□ -0.67
PTCH1-207ENST00000429896 SPANXN1Q5VSR9 72 aa10.85□□□□□ -0.67
PTCH1-207ENST00000429896 OR51B2Q9Y5P1 312 aa10.85□□□□□ -0.67
PTCH1-207ENST00000429896 SLC25A42Q86VD7 318 aa10.84□□□□□ -0.67
PTCH1-207ENST00000429896 PLSCR2Q9NRY7 297 aa10.84□□□□□ -0.67
PTCH1-207ENST00000429896 CACNA1BQ00975 2339 aa10.84□□□□□ -0.67
PTCH1-207ENST00000429896 PAGE4O60829 102 aa10.84□□□□□ -0.67
PTCH1-207ENST00000429896 ACAA1P09110 424 aaPredicted RBP10.84□□□□□ -0.67
PTCH1-207ENST00000429896 RPS11P62280 158 aaKnown RBP eCLIP10.84□□□□□ -0.67
PTCH1-207ENST00000429896 OR10C1Q96KK4 312 aa10.84□□□□□ -0.67
PTCH1-207ENST00000429896 GPHA2Q96T91 129 aa10.84□□□□□ -0.67
PTCH1-207ENST00000429896 KLF2Q9Y5W3 355 aaPredicted RBP10.84□□□□□ -0.67
PTCH1-207ENST00000429896 IGHV3-23P01764 117 aa10.84□□□□□ -0.67
PTCH1-207ENST00000429896 IER3P46695 156 aa10.84□□□□□ -0.67
PTCH1-207ENST00000429896 HGFACQ04756 655 aa10.84□□□□□ -0.67
PTCH1-207ENST00000429896 VAX1Q5SQQ9 334 aa10.84□□□□□ -0.67
PTCH1-207ENST00000429896 RNF24Q9Y225 148 aa10.84□□□□□ -0.67
PTCH1-207ENST00000429896 KBTBD11-OT1A0A1B0GTJ5 212 aa10.84□□□□□ -0.67
PTCH1-207ENST00000429896 LYZL2Q7Z4W2 148 aa10.84□□□□□ -0.67
PTCH1-207ENST00000429896 EIF4E3Q8N5X7 224 aaKnown RBP10.84□□□□□ -0.67
PTCH1-207ENST00000429896 OR1N2Q8NGR9 330 aa10.84□□□□□ -0.67
PTCH1-207ENST00000429896 A0A0G2JK05 382 aa10.84□□□□□ -0.67
PTCH1-207ENST00000429896 TMEM178BH3BS89 294 aa10.84□□□□□ -0.67
PTCH1-207ENST00000429896 CLEC18BQ6UXF7 455 aa10.84□□□□□ -0.67
PTCH1-207ENST00000429896 ZNF502Q8TBZ5 544 aa10.84□□□□□ -0.67
PTCH1-207ENST00000429896 SRCAPQ6ZRS2 3230 aa10.84□□□□□ -0.67
PTCH1-207ENST00000429896 TPRP12270 2363 aaKnown RBP10.84□□□□□ -0.67
PTCH1-207ENST00000429896 IQCJQ1A5X6 159 aa10.83□□□□□ -0.68
PTCH1-207ENST00000429896 UQCC3Q6UW78 93 aa10.83□□□□□ -0.68
PTCH1-207ENST00000429896 Q8NA96 180 aa10.83□□□□□ -0.68
PTCH1-207ENST00000429896 DMRTA2Q96SC8 542 aa10.83□□□□□ -0.68
PTCH1-207ENST00000429896 ZNF324O75467 553 aaPredicted RBP10.83□□□□□ -0.68
PTCH1-207ENST00000429896 LGALSLQ3ZCW2 172 aaPredicted RBP10.83□□□□□ -0.68
PTCH1-207ENST00000429896 WDFY1Q8IWB7 410 aa10.83□□□□□ -0.68
PTCH1-207ENST00000429896 OR1L8Q8NGR8 309 aa10.83□□□□□ -0.68
PTCH1-207ENST00000429896 RBFOX3A6NFN3 312 aa10.83□□□□□ -0.68
PTCH1-207ENST00000429896 CEACAM18A8MTB9 384 aa10.83□□□□□ -0.68
PTCH1-207ENST00000429896 H3BTX0 84 aa10.83□□□□□ -0.68
PTCH1-207ENST00000429896 OR13A1Q8NGR1 328 aa10.83□□□□□ -0.68
PTCH1-207ENST00000429896 NDUFS8O00217 210 aa10.83□□□□□ -0.68
PTCH1-207ENST00000429896 NMUP48645 174 aa10.83□□□□□ -0.68
PTCH1-207ENST00000429896 DLX1P56177 255 aa10.83□□□□□ -0.68
PTCH1-207ENST00000429896 PAFAH1B2P68402 229 aa10.83□□□□□ -0.68
PTCH1-207ENST00000429896 CLRN3Q8NCR9 226 aa10.83□□□□□ -0.68
PTCH1-207ENST00000429896 JMJD8Q96S16 334 aa10.83□□□□□ -0.68
PTCH1-207ENST00000429896 MAP1LC3CQ9BXW4 147 aa10.83□□□□□ -0.68
PTCH1-207ENST00000429896 SLC35B3Q9H1N7 401 aa10.83□□□□□ -0.68
PTCH1-207ENST00000429896 DPM3Q9P2X0 92 aa10.83□□□□□ -0.68
PTCH1-207ENST00000429896 METRNQ9UJH8 293 aa10.83□□□□□ -0.68
PTCH1-207ENST00000429896 C16orf92Q96LL3 132 aa10.83□□□□□ -0.68
PTCH1-207ENST00000429896 ELOVL1Q9BW60 279 aa10.83□□□□□ -0.68
PTCH1-207ENST00000429896 FUT9Q9Y231 359 aa10.83□□□□□ -0.68
PTCH1-207ENST00000429896 IGKV1-9A0A0C4DH69 117 aa10.82□□□□□ -0.68
PTCH1-207ENST00000429896 LINC00862A6NCI5 91 aa10.82□□□□□ -0.68
PTCH1-207ENST00000429896 IGHV3-48P01763 117 aa10.82□□□□□ -0.68
PTCH1-207ENST00000429896 UNC119Q13432 240 aa10.82□□□□□ -0.68
PTCH1-207ENST00000429896 TMEM183BQ1AE95 376 aa10.82□□□□□ -0.68
PTCH1-207ENST00000429896 TMEM255AQ5JRV8 349 aa10.82□□□□□ -0.68
PTCH1-207ENST00000429896 OR4B1Q8NGF8 309 aa10.82□□□□□ -0.68
PTCH1-207ENST00000429896 SDK2Q58EX2 2172 aa10.82□□□□□ -0.68
PTCH1-207ENST00000429896 GVINP1Q7Z2Y8 2422 aa10.82□□□□□ -0.68
PTCH1-207ENST00000429896 IGHV3-35A0A0C4DH35 117 aa10.82□□□□□ -0.68
PTCH1-207ENST00000429896 IGHV3-66A0A0C4DH42 116 aa10.82□□□□□ -0.68
PTCH1-207ENST00000429896 HLA-DRB5Q30154 266 aa10.82□□□□□ -0.68
PTCH1-207ENST00000429896 Q5PR19 223 aa10.82□□□□□ -0.68
PTCH1-207ENST00000429896 OR2T10Q8NGZ9 312 aa10.82□□□□□ -0.68
PTCH1-207ENST00000429896 IL36RNQ9UBH0 155 aa10.82□□□□□ -0.68
PTCH1-207ENST00000429896 B4DSR2 109 aa10.82□□□□□ -0.68
PTCH1-207ENST00000429896 FAM166AQ6J272 317 aa10.82□□□□□ -0.68
PTCH1-207ENST00000429896 TLNRD1Q9H1K6 362 aa10.82□□□□□ -0.68
PTCH1-207ENST00000429896 C12orf77C9JDV5 145 aa10.82□□□□□ -0.68
PTCH1-207ENST00000429896 SIGLEC5O15389 551 aa10.82□□□□□ -0.68
PTCH1-207ENST00000429896 DLK1P80370 383 aa10.82□□□□□ -0.68
PTCH1-207ENST00000429896 PCNX2A6NKB5 2137 aa10.82□□□□□ -0.68
PTCH1-207ENST00000429896 ZNF253O75346 499 aa10.82□□□□□ -0.68
PTCH1-207ENST00000429896 ADORA2A-AS1P86434 159 aa10.82□□□□□ -0.68
PTCH1-207ENST00000429896 ANKRD55Q3KP44 614 aa10.82□□□□□ -0.68
PTCH1-207ENST00000429896 ZNF738Q8NE65 137 aa10.82□□□□□ -0.68
PTCH1-207ENST00000429896 MYOZ3Q8TDC0 251 aa10.82□□□□□ -0.68
PTCH1-207ENST00000429896 RCC2Q9P258 522 aaKnown RBP10.82□□□□□ -0.68
PTCH1-207ENST00000429896 SYNGR2O43760 224 aa10.81□□□□□ -0.68
PTCH1-207ENST00000429896 IFITM2Q01629 132 aa10.81□□□□□ -0.68
PTCH1-207ENST00000429896 TCTEX1D1Q8N7M0 179 aa10.81□□□□□ -0.68
PTCH1-207ENST00000429896 PHYHIPLQ96FC7 376 aa10.81□□□□□ -0.68
PTCH1-207ENST00000429896 SGK494Q96LW2 274 aa10.81□□□□□ -0.68
PTCH1-207ENST00000429896 TM4SF20Q53R12 229 aa10.81□□□□□ -0.68
PTCH1-207ENST00000429896 SIGIRRQ6IA17 410 aa10.81□□□□□ -0.68
PTCH1-207ENST00000429896 DPPA3Q6W0C5 159 aa10.81□□□□□ -0.68
PTCH1-207ENST00000429896 RSG1Q9BU20 258 aa10.81□□□□□ -0.68
PTCH1-207ENST00000429896 SRRM5B3KS81 715 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms