RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 GPR31O00270 319 aa7.09□□□□□ -1.27
SMC1A-203ENST00000428014 FCGR3BO75015 233 aa7.09□□□□□ -1.27
SMC1A-203ENST00000428014 DHFRP00374 187 aa7.09□□□□□ -1.27
SMC1A-203ENST00000428014 CD74P04233 296 aa7.09□□□□□ -1.27
SMC1A-203ENST00000428014 CRYGCP07315 174 aa7.09□□□□□ -1.27
SMC1A-203ENST00000428014 SAA1P0DJI8 122 aaPredicted RBP7.09□□□□□ -1.27
SMC1A-203ENST00000428014 ZP3P21754 424 aa7.09□□□□□ -1.27
SMC1A-203ENST00000428014 F2RP25116 425 aa7.09□□□□□ -1.27
SMC1A-203ENST00000428014 CHRNA7P36544 502 aa7.09□□□□□ -1.27
SMC1A-203ENST00000428014 BRWD1-AS2P59051 145 aa7.09□□□□□ -1.27
SMC1A-203ENST00000428014 RND3P61587 244 aa7.09□□□□□ -1.27
SMC1A-203ENST00000428014 SURF2Q15527 256 aaPredicted RBP7.09□□□□□ -1.27
SMC1A-203ENST00000428014 KHDC1LQ5JSQ8 128 aa7.09□□□□□ -1.27
SMC1A-203ENST00000428014 C9orf66Q5T8R8 295 aa7.09□□□□□ -1.27
SMC1A-203ENST00000428014 FOXB2Q5VYV0 432 aa7.09□□□□□ -1.27
SMC1A-203ENST00000428014 UNQ5815/PRO19632Q6UWF5 114 aa7.09□□□□□ -1.27
SMC1A-203ENST00000428014 LHFPL1Q86WI0 220 aa7.09□□□□□ -1.27
SMC1A-203ENST00000428014 LYSMD2Q8IV50 215 aa7.09□□□□□ -1.27
SMC1A-203ENST00000428014 FAM223AQ8IWN6 122 aa7.09□□□□□ -1.27
SMC1A-203ENST00000428014 LFNGQ8NES3 379 aa7.09□□□□□ -1.27
SMC1A-203ENST00000428014 DYNC2LI1Q8TCX1 351 aa7.09□□□□□ -1.27
SMC1A-203ENST00000428014 SRSF12Q8WXF0 261 aaKnown RBP7.09□□□□□ -1.27
SMC1A-203ENST00000428014 TSC22D3Q99576 134 aa7.09□□□□□ -1.27
SMC1A-203ENST00000428014 SLC5A7Q9GZV3 580 aa7.09□□□□□ -1.27
SMC1A-203ENST00000428014 NXF2Q9GZY0 626 aaKnown RBP7.09□□□□□ -1.27
SMC1A-203ENST00000428014 RANGRFQ9HD47 186 aaPredicted RBP7.09□□□□□ -1.27
SMC1A-203ENST00000428014 EHFQ9NZC4 300 aa7.09□□□□□ -1.27
SMC1A-203ENST00000428014 LINC00527Q9UJ94 153 aa7.09□□□□□ -1.27
SMC1A-203ENST00000428014 ZNF257Q9Y2Q1 563 aa7.09□□□□□ -1.27
SMC1A-203ENST00000428014 PIGBOS1A0A0B4J2F0 54 aa7.08□□□□□ -1.28
SMC1A-203ENST00000428014 G3V4G9 280 aa7.08□□□□□ -1.28
SMC1A-203ENST00000428014 CNIH1O95406 144 aa7.08□□□□□ -1.28
SMC1A-203ENST00000428014 HSPB1P04792 205 aaKnown RBP7.08□□□□□ -1.28
SMC1A-203ENST00000428014 OR9G9P0C7N8 305 aa7.08□□□□□ -1.28
SMC1A-203ENST00000428014 ZNF735P0CB33 412 aa7.08□□□□□ -1.28
SMC1A-203ENST00000428014 HIST1H1BP16401 226 aaKnown RBP7.08□□□□□ -1.28
SMC1A-203ENST00000428014 HRH1P35367 487 aa7.08□□□□□ -1.28
SMC1A-203ENST00000428014 RPL30P62888 115 aaKnown RBP7.08□□□□□ -1.28
SMC1A-203ENST00000428014 RPL8P62917 257 aaKnown RBP7.08□□□□□ -1.28
SMC1A-203ENST00000428014 ZNF343Q6P1L6 599 aa7.08□□□□□ -1.28
SMC1A-203ENST00000428014 LCNL1Q6ZST4 164 aa7.08□□□□□ -1.28
SMC1A-203ENST00000428014 ZNF429Q86V71 674 aa7.08□□□□□ -1.28
SMC1A-203ENST00000428014 SLC38A6Q8IZM9 456 aa7.08□□□□□ -1.28
SMC1A-203ENST00000428014 SPAG16Q8N0X2 631 aa7.08□□□□□ -1.28
SMC1A-203ENST00000428014 NECAP1Q8NC96 275 aa7.08□□□□□ -1.28
SMC1A-203ENST00000428014 ADAD2Q8NCV1 583 aaKnown RBP7.08□□□□□ -1.28
SMC1A-203ENST00000428014 OR11H1Q8NG94 326 aa7.08□□□□□ -1.28
SMC1A-203ENST00000428014 OR1N2Q8NGR9 330 aa7.08□□□□□ -1.28
SMC1A-203ENST00000428014 ZFAND1Q8TCF1 268 aa7.08□□□□□ -1.28
SMC1A-203ENST00000428014 SMIM4Q8WVI0 70 aa7.08□□□□□ -1.28
SMC1A-203ENST00000428014 SECTM1Q8WVN6 248 aa7.08□□□□□ -1.28
SMC1A-203ENST00000428014 TCTEX1D2Q8WW35 142 aa7.08□□□□□ -1.28
SMC1A-203ENST00000428014 RSRP1Q9BUV0 290 aa7.08□□□□□ -1.28
SMC1A-203ENST00000428014 KLK15Q9H2R5 256 aa7.08□□□□□ -1.28
SMC1A-203ENST00000428014 ZNF430Q9H8G1 570 aaPredicted RBP7.08□□□□□ -1.28
SMC1A-203ENST00000428014 CCL28Q9NRJ3 127 aa7.08□□□□□ -1.28
SMC1A-203ENST00000428014 SLC2A9Q9NRM0 540 aa7.08□□□□□ -1.28
SMC1A-203ENST00000428014 FKBP11Q9NYL4 201 aa7.08□□□□□ -1.28
SMC1A-203ENST00000428014 CACFD1Q9UGQ2 172 aa7.08□□□□□ -1.28
SMC1A-203ENST00000428014 WSB1Q9Y6I7 421 aa7.08□□□□□ -1.28
SMC1A-203ENST00000428014 A0A1W2PRX2 142 aa7.07□□□□□ -1.28
SMC1A-203ENST00000428014 LINC01619G3V211 115 aa7.07□□□□□ -1.28
SMC1A-203ENST00000428014 CYB5BO43169 146 aa7.07□□□□□ -1.28
SMC1A-203ENST00000428014 GSTZ1O43708 216 aaPredicted RBP7.07□□□□□ -1.28
SMC1A-203ENST00000428014 HPGDSO60760 199 aa7.07□□□□□ -1.28
SMC1A-203ENST00000428014 PGLYRP1O75594 196 aaPredicted RBP7.07□□□□□ -1.28
SMC1A-203ENST00000428014 LINC00205P59089 165 aa7.07□□□□□ -1.28
SMC1A-203ENST00000428014 TAS2R19P59542 299 aa7.07□□□□□ -1.28
SMC1A-203ENST00000428014 MEF2DQ14814 521 aa7.07□□□□□ -1.28
SMC1A-203ENST00000428014 SPCS2Q15005 226 aa7.07□□□□□ -1.28
SMC1A-203ENST00000428014 ECSCRQ19T08 205 aa7.07□□□□□ -1.28
SMC1A-203ENST00000428014 ASPHD1Q5U4P2 390 aa7.07□□□□□ -1.28
SMC1A-203ENST00000428014 ZNF818PQ6ZRF7 136 aa7.07□□□□□ -1.28
SMC1A-203ENST00000428014 TMEM229BQ8NBD8 167 aa7.07□□□□□ -1.28
SMC1A-203ENST00000428014 OR1L6Q8NGR2 347 aa7.07□□□□□ -1.28
SMC1A-203ENST00000428014 OR5B3Q8NH48 314 aa7.07□□□□□ -1.28
SMC1A-203ENST00000428014 FCAMRQ8WWV6 532 aa7.07□□□□□ -1.28
SMC1A-203ENST00000428014 ZNF2Q9BSG1 426 aaPredicted RBP7.07□□□□□ -1.28
SMC1A-203ENST00000428014 SLIRPQ9GZT3 109 aaKnown RBP7.07□□□□□ -1.28
SMC1A-203ENST00000428014 MSGN1A6NI15 193 aa7.06□□□□□ -1.28
SMC1A-203ENST00000428014 FAM25AB3EWG3 89 aa7.06□□□□□ -1.28
SMC1A-203ENST00000428014 FAM25CB3EWG5 89 aa7.06□□□□□ -1.28
SMC1A-203ENST00000428014 FAM25GB3EWG6 89 aa7.06□□□□□ -1.28
SMC1A-203ENST00000428014 INS-IGF2F8WCM5 200 aa7.06□□□□□ -1.28
SMC1A-203ENST00000428014 ATG12O94817 140 aa7.06□□□□□ -1.28
SMC1A-203ENST00000428014 TRGV3P03979 118 aa7.06□□□□□ -1.28
SMC1A-203ENST00000428014 FCER2P06734 321 aa7.06□□□□□ -1.28
SMC1A-203ENST00000428014 IGLL1P15814 213 aa7.06□□□□□ -1.28
SMC1A-203ENST00000428014 RFX2P48378 723 aa7.06□□□□□ -1.28
SMC1A-203ENST00000428014 TSPAN5P62079 268 aa7.06□□□□□ -1.28
SMC1A-203ENST00000428014 PJVKQ0ZLH3 352 aa7.06□□□□□ -1.28
SMC1A-203ENST00000428014 RNASE10Q5GAN6 216 aaKnown RBP7.06□□□□□ -1.28
SMC1A-203ENST00000428014 AADACL3Q5VUY0 350 aa7.06□□□□□ -1.28
SMC1A-203ENST00000428014 OR4A47Q6IF82 309 aa7.06□□□□□ -1.28
SMC1A-203ENST00000428014 TERB2Q8NHR7 220 aa7.06□□□□□ -1.28
SMC1A-203ENST00000428014 GRPEL2Q8TAA5 225 aa7.06□□□□□ -1.28
SMC1A-203ENST00000428014 ABHD1Q96SE0 405 aa7.06□□□□□ -1.28
SMC1A-203ENST00000428014 SOSTQ9BQB4 213 aa7.06□□□□□ -1.28
SMC1A-203ENST00000428014 DCUN1D5Q9BTE7 237 aa7.06□□□□□ -1.28
SMC1A-203ENST00000428014 SLC2A8Q9NY64 477 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms