RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 EIF4E3Q8N5X7 224 aaKnown RBP16.67■□□□□ 0.26
HCG18-235ENST00000426882 FAM201AQ5SY85 155 aa16.66■□□□□ 0.26
HCG18-235ENST00000426882 OR4A5Q8NH83 315 aa16.66■□□□□ 0.26
HCG18-235ENST00000426882 TMEM186Q96B77 213 aa16.66■□□□□ 0.26
HCG18-235ENST00000426882 NPCDR1Q9BY65 106 aa16.66■□□□□ 0.26
HCG18-235ENST00000426882 REG1AP05451 166 aa16.66■□□□□ 0.26
HCG18-235ENST00000426882 FAM27E3Q08E93 113 aa16.66■□□□□ 0.26
HCG18-235ENST00000426882 WDYHV1Q96HA8 205 aa16.66■□□□□ 0.26
HCG18-235ENST00000426882 ZIC4Q8N9L1 334 aa16.66■□□□□ 0.26
HCG18-235ENST00000426882 TP53BP1Q12888 1972 aaPredicted RBP16.66■□□□□ 0.26
HCG18-235ENST00000426882 M0QZK8 103 aa16.65■□□□□ 0.26
HCG18-235ENST00000426882 GGCTO75223 188 aaKnown RBP16.65■□□□□ 0.26
HCG18-235ENST00000426882 HLA-DQA1P01909 254 aa16.65■□□□□ 0.26
HCG18-235ENST00000426882 BPIFA4PQ86YQ2 179 aa16.65■□□□□ 0.26
HCG18-235ENST00000426882 PLPPR1Q8TBJ4 325 aa16.65■□□□□ 0.26
HCG18-235ENST00000426882 NPIPB3Q92617 1050 aa16.65■□□□□ 0.26
HCG18-235ENST00000426882 MRPL18Q9H0U6 180 aaKnown RBP16.65■□□□□ 0.26
HCG18-235ENST00000426882 CBY1Q9Y3M2 126 aa16.65■□□□□ 0.26
HCG18-235ENST00000426882 RNF115Q9Y4L5 304 aa16.65■□□□□ 0.26
HCG18-235ENST00000426882 TRBV6-7A0A0A0MS04 114 aa16.65■□□□□ 0.26
HCG18-235ENST00000426882 PPIAL4CA0A0B4J2A2 164 aa16.65■□□□□ 0.26
HCG18-235ENST00000426882 SRP19P09132 144 aaKnown RBP16.65■□□□□ 0.26
HCG18-235ENST00000426882 PPIAL4GP0DN37 164 aa16.65■□□□□ 0.26
HCG18-235ENST00000426882 C1orf162Q8NEQ5 155 aaPredicted RBP16.65■□□□□ 0.26
HCG18-235ENST00000426882 HSPB8Q9UJY1 196 aa16.65■□□□□ 0.26
HCG18-235ENST00000426882 PLXNA3P51805 1871 aa16.65■□□□□ 0.26
HCG18-235ENST00000426882 IGHV2OR16-5A0A0B4J2B6 119 aa16.65■□□□□ 0.26
HCG18-235ENST00000426882 CA2P00918 260 aa16.65■□□□□ 0.26
HCG18-235ENST00000426882 Q1RN00 199 aa16.65■□□□□ 0.26
HCG18-235ENST00000426882 GCHFRP30047 84 aa16.65■□□□□ 0.26
HCG18-235ENST00000426882 HOXA4Q00056 320 aaPredicted RBP16.65■□□□□ 0.26
HCG18-235ENST00000426882 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.65■□□□□ 0.26
HCG18-235ENST00000426882 OR8A1Q8NGG7 326 aa16.65■□□□□ 0.26
HCG18-235ENST00000426882 FGFBP3Q8TAT2 258 aa16.65■□□□□ 0.26
HCG18-235ENST00000426882 CACNA1GO43497 2377 aa16.64■□□□□ 0.25
HCG18-235ENST00000426882 DPF1Q92782 380 aa16.64■□□□□ 0.25
HCG18-235ENST00000426882 TCF20Q9UGU0 1960 aaKnown RBP16.64■□□□□ 0.25
HCG18-235ENST00000426882 RRHO14718 337 aa16.64■□□□□ 0.25
HCG18-235ENST00000426882 ARF6P62330 175 aa16.64■□□□□ 0.25
HCG18-235ENST00000426882 OR51G1Q8NGK1 321 aa16.64■□□□□ 0.25
HCG18-235ENST00000426882 C18orf12Q96KH6 178 aa16.64■□□□□ 0.25
HCG18-235ENST00000426882 CRYGSP22914 178 aa16.64■□□□□ 0.25
HCG18-235ENST00000426882 ZNF385CQ66K41 422 aaPredicted RBP16.64■□□□□ 0.25
HCG18-235ENST00000426882 WDR31Q8NA23 367 aa16.64■□□□□ 0.25
HCG18-235ENST00000426882 TMEM208Q9BTX3 173 aa16.64■□□□□ 0.25
HCG18-235ENST00000426882 OR51M1Q9H341 326 aa16.64■□□□□ 0.25
HCG18-235ENST00000426882 THSD7BQ9C0I4 1608 aa16.64■□□□□ 0.25
HCG18-235ENST00000426882 PINLYPA6NC86 204 aa16.63■□□□□ 0.25
HCG18-235ENST00000426882 PRR19A6NJB7 356 aa16.63■□□□□ 0.25
HCG18-235ENST00000426882 GCGP01275 180 aa16.63■□□□□ 0.25
HCG18-235ENST00000426882 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.63■□□□□ 0.25
HCG18-235ENST00000426882 IQCF6A8MYZ5 107 aa16.63■□□□□ 0.25
HCG18-235ENST00000426882 RBM14Q96PK6 669 aaKnown RBP16.63■□□□□ 0.25
HCG18-235ENST00000426882 PPOXP50336 477 aa16.63■□□□□ 0.25
HCG18-235ENST00000426882 CSRP2Q16527 193 aa16.63■□□□□ 0.25
HCG18-235ENST00000426882 ACSF3Q4G176 576 aaPredicted RBP16.63■□□□□ 0.25
HCG18-235ENST00000426882 PCSK4Q6UW60 755 aa16.63■□□□□ 0.25
HCG18-235ENST00000426882 GATAD1Q8WUU5 269 aa16.63■□□□□ 0.25
HCG18-235ENST00000426882 FAM131CQ96AQ9 280 aa16.63■□□□□ 0.25
HCG18-235ENST00000426882 FOXD3Q9UJU5 478 aaPredicted RBP16.63■□□□□ 0.25
HCG18-235ENST00000426882 IGHV1-69-2A0A0G2JMI3 117 aa16.63■□□□□ 0.25
HCG18-235ENST00000426882 F8VVB4 439 aa16.63■□□□□ 0.25
HCG18-235ENST00000426882 F8VWA3 439 aa16.63■□□□□ 0.25
HCG18-235ENST00000426882 TFF3Q07654 80 aa16.63■□□□□ 0.25
HCG18-235ENST00000426882 FAM216BQ8N7L0 139 aa16.63■□□□□ 0.25
HCG18-235ENST00000426882 C19orf24Q9BVV8 132 aa16.63■□□□□ 0.25
HCG18-235ENST00000426882 NTN3O00634 580 aaPredicted RBP16.62■□□□□ 0.25
HCG18-235ENST00000426882 HSPB7Q9UBY9 170 aa16.62■□□□□ 0.25
HCG18-235ENST00000426882 IGKV1-12A0A0C4DH73 117 aa16.62■□□□□ 0.25
HCG18-235ENST00000426882 LDLRAD4O15165 306 aa16.62■□□□□ 0.25
HCG18-235ENST00000426882 IGKV1D-12P01611 117 aa16.62■□□□□ 0.25
HCG18-235ENST00000426882 IL6RP08887 468 aaPredicted RBP16.62■□□□□ 0.25
HCG18-235ENST00000426882 CD40P25942 277 aa16.62■□□□□ 0.25
HCG18-235ENST00000426882 C9orf106Q8NAJ2 232 aa16.62■□□□□ 0.25
HCG18-235ENST00000426882 SGK494Q96LW2 274 aa16.62■□□□□ 0.25
HCG18-235ENST00000426882 RABAC1Q9UI14 185 aa16.62■□□□□ 0.25
HCG18-235ENST00000426882 H3BTX0 84 aa16.62■□□□□ 0.25
HCG18-235ENST00000426882 ZNF525Q8N782 197 aa16.62■□□□□ 0.25
HCG18-235ENST00000426882 KIAA1644Q3SXP7 199 aa16.62■□□□□ 0.25
HCG18-235ENST00000426882 SFRP2Q96HF1 295 aa16.62■□□□□ 0.25
HCG18-235ENST00000426882 TMEM105Q8N8V8 129 aa16.61■□□□□ 0.25
HCG18-235ENST00000426882 GUCD1Q96NT3 240 aa16.61■□□□□ 0.25
HCG18-235ENST00000426882 GBF1Q92538 1859 aa16.61■□□□□ 0.25
HCG18-235ENST00000426882 TMEM189A5PLL7 270 aa16.61■□□□□ 0.25
HCG18-235ENST00000426882 ATP5IP56385 69 aaPredicted RBP16.61■□□□□ 0.25
HCG18-235ENST00000426882 NABP1Q96AH0 204 aa16.61■□□□□ 0.25
HCG18-235ENST00000426882 CLEC7AQ9BXN2 247 aa16.61■□□□□ 0.25
HCG18-235ENST00000426882 POLEQ07864 2286 aa16.61■□□□□ 0.25
HCG18-235ENST00000426882 SH2D7A6NKC9 451 aaPredicted RBP16.61■□□□□ 0.25
HCG18-235ENST00000426882 FAM106CPP0CH98 169 aa16.61■□□□□ 0.25
HCG18-235ENST00000426882 CD99P14209 185 aa16.61■□□□□ 0.25
HCG18-235ENST00000426882 ZNF25P17030 456 aaPredicted RBP16.61■□□□□ 0.25
HCG18-235ENST00000426882 FCGR2BP31994 310 aaPredicted RBP16.61■□□□□ 0.25
HCG18-235ENST00000426882 COMPP49747 757 aaPredicted RBP16.61■□□□□ 0.25
HCG18-235ENST00000426882 FAM166AQ6J272 317 aa16.61■□□□□ 0.25
HCG18-235ENST00000426882 SCGB1C2P0DMR2 95 aa16.61■□□□□ 0.25
HCG18-235ENST00000426882 SRSF3P84103 164 aaKnown RBP16.61■□□□□ 0.25
HCG18-235ENST00000426882 TMEM177Q53S58 311 aa16.61■□□□□ 0.25
HCG18-235ENST00000426882 EAF1Q96JC9 268 aaPredicted RBP16.6■□□□□ 0.25
HCG18-235ENST00000426882 VENTXO95231 258 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms