RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 ZNRD1Q9P1U0 126 aa11.92□□□□□ -0.5
ERCC3-202ENST00000426778 ANKRD11Q6UB99 2663 aaPredicted RBP11.92□□□□□ -0.5
ERCC3-202ENST00000426778 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.91□□□□□ -0.5
ERCC3-202ENST00000426778 SPINK4O60575 86 aa11.91□□□□□ -0.5
ERCC3-202ENST00000426778 FOXH1O75593 365 aa11.91□□□□□ -0.5
ERCC3-202ENST00000426778 MBP02144 154 aa11.91□□□□□ -0.5
ERCC3-202ENST00000426778 GCH1P30793 250 aa11.91□□□□□ -0.5
ERCC3-202ENST00000426778 SSX2Q16385 188 aa11.91□□□□□ -0.5
ERCC3-202ENST00000426778 DBX2Q6ZNG2 339 aa11.91□□□□□ -0.5
ERCC3-202ENST00000426778 REC114Q7Z4M0 266 aa11.91□□□□□ -0.5
ERCC3-202ENST00000426778 SGMS2Q8NHU3 365 aa11.91□□□□□ -0.5
ERCC3-202ENST00000426778 TMEM170AQ8WVE7 144 aa11.91□□□□□ -0.5
ERCC3-202ENST00000426778 TAAR6Q96RI8 345 aa11.91□□□□□ -0.5
ERCC3-202ENST00000426778 MGST2Q99735 147 aa11.91□□□□□ -0.5
ERCC3-202ENST00000426778 ATG101Q9BSB4 218 aa11.91□□□□□ -0.5
ERCC3-202ENST00000426778 PARD6GQ9BYG4 376 aaPredicted RBP11.91□□□□□ -0.5
ERCC3-202ENST00000426778 CXXC4Q9H2H0 198 aa11.91□□□□□ -0.5
ERCC3-202ENST00000426778 C19orf67A6NJJ6 358 aa11.91□□□□□ -0.5
ERCC3-202ENST00000426778 C17orf112F2Z3M2 114 aa11.91□□□□□ -0.5
ERCC3-202ENST00000426778 SPINT2O43291 252 aa11.91□□□□□ -0.5
ERCC3-202ENST00000426778 KIR2DL2P43627 348 aaPredicted RBP11.91□□□□□ -0.5
ERCC3-202ENST00000426778 PDLIM3Q53GG5 364 aaPredicted RBP11.91□□□□□ -0.5
ERCC3-202ENST00000426778 ACTL10Q5JWF8 245 aa11.91□□□□□ -0.5
ERCC3-202ENST00000426778 FDCSPQ8NFU4 85 aa11.91□□□□□ -0.5
ERCC3-202ENST00000426778 SEPSECSQ9HD40 501 aaKnown RBP11.91□□□□□ -0.5
ERCC3-202ENST00000426778 TRAPPC1Q9Y5R8 145 aa11.91□□□□□ -0.5
ERCC3-202ENST00000426778 IGKV1D-17A0A075B6S4 117 aa11.9□□□□□ -0.5
ERCC3-202ENST00000426778 TMEM265A0A087WTH1 108 aa11.9□□□□□ -0.5
ERCC3-202ENST00000426778 C15orf65H3BRN8 121 aa11.9□□□□□ -0.5
ERCC3-202ENST00000426778 ACSF3Q4G176 576 aaPredicted RBP11.9□□□□□ -0.5
ERCC3-202ENST00000426778 Q6ZT83 130 aa11.9□□□□□ -0.5
ERCC3-202ENST00000426778 MOB3BQ86TA1 216 aa11.9□□□□□ -0.5
ERCC3-202ENST00000426778 DEFB123Q8N688 67 aa11.9□□□□□ -0.5
ERCC3-202ENST00000426778 DEFB108BQ8NET1 73 aa11.9□□□□□ -0.5
ERCC3-202ENST00000426778 ZDHHC11Q9H8X9 412 aa11.9□□□□□ -0.5
ERCC3-202ENST00000426778 SCGB1D1O95968 90 aa11.9□□□□□ -0.5
ERCC3-202ENST00000426778 TNFSF10P50591 281 aa11.9□□□□□ -0.5
ERCC3-202ENST00000426778 SMIM21Q3B7S5 101 aa11.9□□□□□ -0.5
ERCC3-202ENST00000426778 ZBTB34Q8NCN2 500 aa11.9□□□□□ -0.5
ERCC3-202ENST00000426778 CIB3Q96Q77 187 aaPredicted RBP11.9□□□□□ -0.5
ERCC3-202ENST00000426778 IER2Q9BTL4 223 aa11.9□□□□□ -0.5
ERCC3-202ENST00000426778 WDR83OSQ9Y284 106 aa11.9□□□□□ -0.5
ERCC3-202ENST00000426778 PXMP4Q9Y6I8 212 aa11.9□□□□□ -0.5
ERCC3-202ENST00000426778 TMEM210A6NLX4 147 aa11.9□□□□□ -0.51
ERCC3-202ENST00000426778 GATA2P23769 480 aaPredicted RBP11.9□□□□□ -0.51
ERCC3-202ENST00000426778 HLA-DRB5Q30154 266 aa11.9□□□□□ -0.51
ERCC3-202ENST00000426778 YTHDF2Q9Y5A9 579 aaKnown RBP11.9□□□□□ -0.51
ERCC3-202ENST00000426778 ACACAQ13085 2346 aa11.89□□□□□ -0.51
ERCC3-202ENST00000426778 CBLN1P23435 193 aa11.89□□□□□ -0.51
ERCC3-202ENST00000426778 CNN1P51911 297 aaKnown RBP11.89□□□□□ -0.51
ERCC3-202ENST00000426778 CLCF1Q9UBD9 225 aa11.89□□□□□ -0.51
ERCC3-202ENST00000426778 DVL1O14640 695 aa11.89□□□□□ -0.51
ERCC3-202ENST00000426778 TGOLN2O43493 480 aa11.89□□□□□ -0.51
ERCC3-202ENST00000426778 SPRY3O43610 288 aa11.89□□□□□ -0.51
ERCC3-202ENST00000426778 GGCTO75223 188 aaKnown RBP11.89□□□□□ -0.51
ERCC3-202ENST00000426778 ZNF83P51522 516 aa11.89□□□□□ -0.51
ERCC3-202ENST00000426778 MORN2Q502X0 79 aa11.89□□□□□ -0.51
ERCC3-202ENST00000426778 INO80CQ6PI98 192 aaPredicted RBP11.89□□□□□ -0.51
ERCC3-202ENST00000426778 TMEM178AQ8NBL3 297 aa11.89□□□□□ -0.51
ERCC3-202ENST00000426778 OCC1Q8TAD7 63 aa11.89□□□□□ -0.51
ERCC3-202ENST00000426778 ANAPC16Q96DE5 110 aa11.89□□□□□ -0.51
ERCC3-202ENST00000426778 HSD17B10Q99714 261 aaKnown RBP11.89□□□□□ -0.51
ERCC3-202ENST00000426778 MRPL37Q9BZE1 423 aaKnown RBP11.89□□□□□ -0.51
ERCC3-202ENST00000426778 TMEM140Q9NV12 185 aa11.89□□□□□ -0.51
ERCC3-202ENST00000426778 LRBAP50851 2863 aa11.88□□□□□ -0.51
ERCC3-202ENST00000426778 ZFHX2Q9C0A1 2572 aaPredicted RBP11.88□□□□□ -0.51
ERCC3-202ENST00000426778 OTOGLQ3ZCN5 2332 aa11.88□□□□□ -0.51
ERCC3-202ENST00000426778 A8MWP6 167 aa11.88□□□□□ -0.51
ERCC3-202ENST00000426778 AHRRA9YTQ3 701 aa11.88□□□□□ -0.51
ERCC3-202ENST00000426778 EREGO14944 169 aa11.88□□□□□ -0.51
ERCC3-202ENST00000426778 IGKV3-15P01624 115 aa11.88□□□□□ -0.51
ERCC3-202ENST00000426778 GNG10P50151 68 aa11.88□□□□□ -0.51
ERCC3-202ENST00000426778 SLC35B1P78383 322 aa11.88□□□□□ -0.51
ERCC3-202ENST00000426778 OR5I1Q13606 314 aa11.88□□□□□ -0.51
ERCC3-202ENST00000426778 MOGAT3Q86VF5 341 aa11.88□□□□□ -0.51
ERCC3-202ENST00000426778 SNRNP40Q96DI7 357 aaKnown RBP11.88□□□□□ -0.51
ERCC3-202ENST00000426778 IGHV2OR16-5A0A0B4J2B6 119 aa11.88□□□□□ -0.51
ERCC3-202ENST00000426778 IGHV1-18A0A0C4DH31 117 aa11.88□□□□□ -0.51
ERCC3-202ENST00000426778 WT1P19544 449 aaPredicted RBP11.88□□□□□ -0.51
ERCC3-202ENST00000426778 VWC2Q2TAL6 325 aa11.88□□□□□ -0.51
ERCC3-202ENST00000426778 TEX38Q6PEX7 206 aa11.88□□□□□ -0.51
ERCC3-202ENST00000426778 KCNIP4Q6PIL6 250 aa11.88□□□□□ -0.51
ERCC3-202ENST00000426778 TGIF2LYQ8IUE0 185 aa11.88□□□□□ -0.51
ERCC3-202ENST00000426778 OR5R1Q8NH85 324 aa11.88□□□□□ -0.51
ERCC3-202ENST00000426778 C1orf159Q96HA4 380 aa11.88□□□□□ -0.51
ERCC3-202ENST00000426778 GGTLC1Q9BX51 225 aa11.88□□□□□ -0.51
ERCC3-202ENST00000426778 CBLN4Q9NTU7 201 aa11.88□□□□□ -0.51
ERCC3-202ENST00000426778 TANC2Q9HCD6 1990 aa11.88□□□□□ -0.51
ERCC3-202ENST00000426778 F6UZH7 168 aa11.87□□□□□ -0.51
ERCC3-202ENST00000426778 GFRA3O60609 400 aa11.87□□□□□ -0.51
ERCC3-202ENST00000426778 ADMP35318 185 aa11.87□□□□□ -0.51
ERCC3-202ENST00000426778 SFRP2Q96HF1 295 aa11.87□□□□□ -0.51
ERCC3-202ENST00000426778 F2Z2F3 143 aa11.87□□□□□ -0.51
ERCC3-202ENST00000426778 PAX5Q02548 391 aa11.87□□□□□ -0.51
ERCC3-202ENST00000426778 ZNF718Q3SXZ3 478 aa11.87□□□□□ -0.51
ERCC3-202ENST00000426778 ARSJQ5FYB0 599 aaPredicted RBP11.87□□□□□ -0.51
ERCC3-202ENST00000426778 RPRMLQ8N4K4 120 aa11.87□□□□□ -0.51
ERCC3-202ENST00000426778 BSNQ9UPA5 3926 aa11.87□□□□□ -0.51
ERCC3-202ENST00000426778 SP9P0CG40 484 aa11.87□□□□□ -0.51
ERCC3-202ENST00000426778 MLANAQ16655 118 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms