RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 MORN2Q502X0 79 aa12.61□□□□□ -0.39
C9orf3-204ENST00000424143 GCSAMLQ5JQS6 135 aa12.61□□□□□ -0.39
C9orf3-204ENST00000424143 Q6ZR03 302 aa12.61□□□□□ -0.39
C9orf3-204ENST00000424143 Q6ZT83 130 aa12.61□□□□□ -0.39
C9orf3-204ENST00000424143 MYPOPQ86VE0 399 aaPredicted RBP12.61□□□□□ -0.39
C9orf3-204ENST00000424143 OSTCQ9NRP0 149 aa12.61□□□□□ -0.39
C9orf3-204ENST00000424143 TP53TG3Q9ULZ0 132 aa12.61□□□□□ -0.39
C9orf3-204ENST00000424143 SCO2A0A1W2PP80 73 aa12.6□□□□□ -0.39
C9orf3-204ENST00000424143 NUPR1O60356 82 aa12.6□□□□□ -0.39
C9orf3-204ENST00000424143 MPV17P39210 176 aa12.6□□□□□ -0.39
C9orf3-204ENST00000424143 TMEM183BQ1AE95 376 aa12.6□□□□□ -0.39
C9orf3-204ENST00000424143 MBNL2Q5VZF2 373 aaKnown RBP12.6□□□□□ -0.39
C9orf3-204ENST00000424143 TEPPQ6URK8 271 aa12.6□□□□□ -0.39
C9orf3-204ENST00000424143 FAM169BQ8N8A8 192 aa12.6□□□□□ -0.39
C9orf3-204ENST00000424143 DDB2Q92466 427 aa12.6□□□□□ -0.39
C9orf3-204ENST00000424143 EAF1Q96JC9 268 aaPredicted RBP12.6□□□□□ -0.39
C9orf3-204ENST00000424143 MRPL18Q9H0U6 180 aaKnown RBP12.6□□□□□ -0.39
C9orf3-204ENST00000424143 TMEM167BQ9NRX6 74 aa12.6□□□□□ -0.39
C9orf3-204ENST00000424143 PLA2G3Q9NZ20 509 aa12.6□□□□□ -0.39
C9orf3-204ENST00000424143 TCF19Q9Y242 345 aa12.6□□□□□ -0.39
C9orf3-204ENST00000424143 FOXA2Q9Y261 457 aaPredicted RBP12.6□□□□□ -0.39
C9orf3-204ENST00000424143 ZNF705FA8MVS1 300 aaPredicted RBP12.59□□□□□ -0.39
C9orf3-204ENST00000424143 RRHO14718 337 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 WNT9BO14905 357 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 IL6RP08887 468 aaPredicted RBP12.59□□□□□ -0.39
C9orf3-204ENST00000424143 ZNF705DP0CH99 300 aaPredicted RBP12.59□□□□□ -0.39
C9orf3-204ENST00000424143 ZNF705BP0CI00 300 aaPredicted RBP12.59□□□□□ -0.39
C9orf3-204ENST00000424143 SPINK2P20155 84 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 BTF3P20290 206 aaKnown RBP12.59□□□□□ -0.39
C9orf3-204ENST00000424143 PLA2G5P39877 138 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 RAB7AP51149 207 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 LINC00310P59036 64 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 PRR20EP86478 221 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 PRR20CP86479 221 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 PRR20DP86480 221 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 PRR20BP86481 221 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 PRR20AP86496 221 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 OR10J3Q5JRS4 329 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 TMEM164Q5U3C3 297 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 MIC13Q5XKP0 118 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 Q6ZWC4 215 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 OR5T1Q8NG75 326 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 C1orf159Q96HA4 380 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 ADTRPQ96IZ2 230 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 CDX2Q99626 313 aaPredicted RBP12.59□□□□□ -0.39
C9orf3-204ENST00000424143 PATZ1Q9HBE1 687 aaKnown RBP12.59□□□□□ -0.39
C9orf3-204ENST00000424143 SPRR3Q9UBC9 169 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 CLCF1Q9UBD9 225 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 YTHDF2Q9Y5A9 579 aaKnown RBP12.59□□□□□ -0.39
C9orf3-204ENST00000424143 SZT2Q5T011 3432 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 C15orf61A6NNL5 157 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 MGST3O14880 152 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 FCGR3BO75015 233 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 EGR1P18146 543 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 PRDX2P32119 198 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 SSTR5P35346 364 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 HSPE1P61604 102 aaKnown RBP12.59□□□□□ -0.39
C9orf3-204ENST00000424143 RPL31P62899 125 aaKnown RBP12.59□□□□□ -0.39
C9orf3-204ENST00000424143 EFNB3Q15768 340 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 C3AR1Q16581 482 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 RPEL1Q2QD12 228 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 OR5AU1Q8NGC0 362 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 OR4S2Q8NH73 311 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 SDSLQ96GA7 329 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 SLC35E1Q96K37 410 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 S1PR3Q99500 378 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 CBLN4Q9NTU7 201 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 SLC45A2Q9UMX9 530 aa12.59□□□□□ -0.39
C9orf3-204ENST00000424143 DOCK11Q5JSL3 2073 aa12.58□□□□□ -0.4
C9orf3-204ENST00000424143 C19orf67A6NJJ6 358 aa12.58□□□□□ -0.4
C9orf3-204ENST00000424143 LAMTOR5O43504 91 aa12.58□□□□□ -0.4
C9orf3-204ENST00000424143 RPLP1P05386 114 aaKnown RBP12.58□□□□□ -0.4
C9orf3-204ENST00000424143 TMEM30BQ3MIR4 351 aa12.58□□□□□ -0.4
C9orf3-204ENST00000424143 ZNF826PQ6ZT77 177 aa12.58□□□□□ -0.4
C9orf3-204ENST00000424143 CD177Q8N6Q3 437 aa12.58□□□□□ -0.4
C9orf3-204ENST00000424143 OR1L6Q8NGR2 347 aa12.58□□□□□ -0.4
C9orf3-204ENST00000424143 Q8TCH9 128 aa12.58□□□□□ -0.4
C9orf3-204ENST00000424143 NEUROG1Q92886 237 aa12.58□□□□□ -0.4
C9orf3-204ENST00000424143 TMEM14BQ9NUH8 114 aa12.58□□□□□ -0.4
C9orf3-204ENST00000424143 V9GYV3 84 aa12.58□□□□□ -0.4
C9orf3-204ENST00000424143 SRRM5B3KS81 715 aa12.57□□□□□ -0.4
C9orf3-204ENST00000424143 K7EN84 100 aa12.57□□□□□ -0.4
C9orf3-204ENST00000424143 IGLV1-44P01699 117 aa12.57□□□□□ -0.4
C9orf3-204ENST00000424143 IGHG3P01860 377 aa12.57□□□□□ -0.4
C9orf3-204ENST00000424143 OR5G3P0C626 314 aa12.57□□□□□ -0.4
C9orf3-204ENST00000424143 LINC00614P0C842 121 aa12.57□□□□□ -0.4
C9orf3-204ENST00000424143 CGB3P0DN86 165 aa12.57□□□□□ -0.4
C9orf3-204ENST00000424143 CGB7P0DN87 165 aa12.57□□□□□ -0.4
C9orf3-204ENST00000424143 LOXL3P58215 753 aa12.57□□□□□ -0.4
C9orf3-204ENST00000424143 CX3CL1P78423 397 aa12.57□□□□□ -0.4
C9orf3-204ENST00000424143 FAM53AQ6NSI3 398 aaPredicted RBP12.57□□□□□ -0.4
C9orf3-204ENST00000424143 LINC00696Q6ZRV3 163 aa12.57□□□□□ -0.4
C9orf3-204ENST00000424143 FAM214BQ7L5A3 538 aa12.57□□□□□ -0.4
C9orf3-204ENST00000424143 MMD2Q8IY49 270 aa12.57□□□□□ -0.4
C9orf3-204ENST00000424143 GCNT2Q8N0V5 402 aa12.57□□□□□ -0.4
C9orf3-204ENST00000424143 TMEM178AQ8NBL3 297 aa12.57□□□□□ -0.4
C9orf3-204ENST00000424143 OR4B1Q8NGF8 309 aa12.57□□□□□ -0.4
C9orf3-204ENST00000424143 TMEM140Q9NV12 185 aa12.57□□□□□ -0.4
C9orf3-204ENST00000424143 IL19Q9UHD0 177 aa12.57□□□□□ -0.4
C9orf3-204ENST00000424143 M0R1X1 148 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 459.4 ms