RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 ZNF891A8MT65 544 aaPredicted RBP13.07□□□□□ -0.32
CDH1-202ENST00000422392 AQP7O14520 342 aa13.07□□□□□ -0.32
CDH1-202ENST00000422392 GGCTO75223 188 aaKnown RBP13.07□□□□□ -0.32
CDH1-202ENST00000422392 WT1P19544 449 aaPredicted RBP13.07□□□□□ -0.32
CDH1-202ENST00000422392 IL3RAP26951 378 aa13.07□□□□□ -0.32
CDH1-202ENST00000422392 PKIAP61925 76 aa13.07□□□□□ -0.32
CDH1-202ENST00000422392 JOSD1Q15040 202 aaPredicted RBP13.07□□□□□ -0.32
CDH1-202ENST00000422392 ACTL10Q5JWF8 245 aa13.07□□□□□ -0.32
CDH1-202ENST00000422392 DIRC2Q96SL1 478 aa13.07□□□□□ -0.32
CDH1-202ENST00000422392 A0A087X0M5 115 aa13.06□□□□□ -0.32
CDH1-202ENST00000422392 A0A1B0GX30 115 aa13.06□□□□□ -0.32
CDH1-202ENST00000422392 ZNF705GA8MUZ8 300 aaPredicted RBP13.06□□□□□ -0.32
CDH1-202ENST00000422392 RBFOX2O43251 390 aaKnown RBP eCLIP13.06□□□□□ -0.32
CDH1-202ENST00000422392 A0A0U1RQK1 487 aa13.06□□□□□ -0.32
CDH1-202ENST00000422392 TSTD3H0UI37 97 aa13.06□□□□□ -0.32
CDH1-202ENST00000422392 M0R296 226 aa13.06□□□□□ -0.32
CDH1-202ENST00000422392 GFRA3O60609 400 aa13.06□□□□□ -0.32
CDH1-202ENST00000422392 VENTXO95231 258 aa13.06□□□□□ -0.32
CDH1-202ENST00000422392 MYOD1P15172 320 aa13.06□□□□□ -0.32
CDH1-202ENST00000422392 LOXL3P58215 753 aa13.06□□□□□ -0.32
CDH1-202ENST00000422392 VHLLQ6RSH7 139 aa13.06□□□□□ -0.32
CDH1-202ENST00000422392 FAM90A1Q86YD7 464 aa13.06□□□□□ -0.32
CDH1-202ENST00000422392 GCSAMQ8N6F7 178 aa13.06□□□□□ -0.32
CDH1-202ENST00000422392 PXMP4Q9Y6I8 212 aa13.06□□□□□ -0.32
CDH1-202ENST00000422392 RAI1Q7Z5J4 1906 aaPredicted RBP13.06□□□□□ -0.32
CDH1-202ENST00000422392 TTC28Q96AY4 2481 aa13.05□□□□□ -0.32
CDH1-202ENST00000422392 ZNF320A2RRD8 509 aa13.05□□□□□ -0.32
CDH1-202ENST00000422392 VDAC2P45880 294 aaPredicted RBP13.05□□□□□ -0.32
CDH1-202ENST00000422392 SPCS3P61009 180 aa13.05□□□□□ -0.32
CDH1-202ENST00000422392 RELBQ01201 579 aa13.05□□□□□ -0.32
CDH1-202ENST00000422392 PDLIM3Q53GG5 364 aaPredicted RBP13.05□□□□□ -0.32
CDH1-202ENST00000422392 DUX4L9Q6RFH8 374 aaPredicted RBP13.05□□□□□ -0.32
CDH1-202ENST00000422392 C1orf159Q96HA4 380 aa13.05□□□□□ -0.32
CDH1-202ENST00000422392 GGTLC1Q9BX51 225 aa13.05□□□□□ -0.32
CDH1-202ENST00000422392 IFI27L2Q9H2X8 130 aa13.05□□□□□ -0.32
CDH1-202ENST00000422392 TMEM140Q9NV12 185 aa13.05□□□□□ -0.32
CDH1-202ENST00000422392 SCO2A0A1W2PP80 73 aa13.05□□□□□ -0.32
CDH1-202ENST00000422392 SRRM5B3KS81 715 aa13.05□□□□□ -0.32
CDH1-202ENST00000422392 PRSS46E5RG02 174 aa13.05□□□□□ -0.32
CDH1-202ENST00000422392 DVL1O14640 695 aa13.05□□□□□ -0.32
CDH1-202ENST00000422392 IGLV1-44P01699 117 aa13.05□□□□□ -0.32
CDH1-202ENST00000422392 SPATA31B1PQ5VZV4 182 aa13.05□□□□□ -0.32
CDH1-202ENST00000422392 TCF23Q7RTU1 214 aa13.05□□□□□ -0.32
CDH1-202ENST00000422392 MOGAT3Q86VF5 341 aa13.05□□□□□ -0.32
CDH1-202ENST00000422392 OR2V2Q96R30 315 aa13.05□□□□□ -0.32
CDH1-202ENST00000422392 A0A1B0GV90 55 aa13.04□□□□□ -0.32
CDH1-202ENST00000422392 PDE6DO43924 150 aa13.04□□□□□ -0.32
CDH1-202ENST00000422392 TNFSF13O75888 250 aa13.04□□□□□ -0.32
CDH1-202ENST00000422392 SRP14P37108 136 aaKnown RBP13.04□□□□□ -0.32
CDH1-202ENST00000422392 ZNF83P51522 516 aa13.04□□□□□ -0.32
CDH1-202ENST00000422392 MBNL2Q5VZF2 373 aaKnown RBP13.04□□□□□ -0.32
CDH1-202ENST00000422392 ZNF600Q6ZNG1 722 aa13.04□□□□□ -0.32
CDH1-202ENST00000422392 ZNF664Q8N3J9 261 aa13.04□□□□□ -0.32
CDH1-202ENST00000422392 OR5R1Q8NH85 324 aa13.04□□□□□ -0.32
CDH1-202ENST00000422392 ERVK-16P61578 105 aa13.04□□□□□ -0.32
CDH1-202ENST00000422392 TRIP6Q15654 476 aaKnown RBP13.04□□□□□ -0.32
CDH1-202ENST00000422392 COA6Q5JTJ3 125 aaKnown RBP13.04□□□□□ -0.32
CDH1-202ENST00000422392 KCNIP4Q6PIL6 250 aa13.04□□□□□ -0.32
CDH1-202ENST00000422392 S1PR3Q99500 378 aa13.04□□□□□ -0.32
CDH1-202ENST00000422392 ZNF71Q9NQZ8 489 aaPredicted RBP13.04□□□□□ -0.32
CDH1-202ENST00000422392 DKK4Q9UBT3 224 aa13.04□□□□□ -0.32
CDH1-202ENST00000422392 JPT1Q9UK76 154 aa13.04□□□□□ -0.32
CDH1-202ENST00000422392 C1orf162Q8NEQ5 155 aaPredicted RBP13.03□□□□□ -0.32
CDH1-202ENST00000422392 RNASEH2CQ8TDP1 164 aaKnown RBP13.03□□□□□ -0.32
CDH1-202ENST00000422392 RAB1CQ92928 201 aa13.03□□□□□ -0.32
CDH1-202ENST00000422392 STARD4Q96DR4 205 aa13.03□□□□□ -0.32
CDH1-202ENST00000422392 SEPSECSQ9HD40 501 aaKnown RBP13.03□□□□□ -0.32
CDH1-202ENST00000422392 KCNIP2Q9NS61 270 aa13.03□□□□□ -0.32
CDH1-202ENST00000422392 TCF19Q9Y242 345 aa13.03□□□□□ -0.32
CDH1-202ENST00000422392 PRR33A8MZF0 331 aa13.03□□□□□ -0.32
CDH1-202ENST00000422392 MGST3O14880 152 aa13.03□□□□□ -0.32
CDH1-202ENST00000422392 SPRY3O43610 288 aa13.03□□□□□ -0.32
CDH1-202ENST00000422392 OPRK1P41145 380 aa13.03□□□□□ -0.32
CDH1-202ENST00000422392 THBS3P49746 956 aa13.03□□□□□ -0.32
CDH1-202ENST00000422392 CISD2Q8N5K1 135 aaKnown RBP13.03□□□□□ -0.32
CDH1-202ENST00000422392 SGMS2Q8NHU3 365 aa13.03□□□□□ -0.32
CDH1-202ENST00000422392 PLSCR4Q9NRQ2 329 aa13.03□□□□□ -0.32
CDH1-202ENST00000422392 YTHDF2Q9Y5A9 579 aaKnown RBP13.03□□□□□ -0.32
CDH1-202ENST00000422392 YPEL1O60688 119 aa13.02□□□□□ -0.32
CDH1-202ENST00000422392 FOXH1O75593 365 aa13.02□□□□□ -0.32
CDH1-202ENST00000422392 TYMSP04818 313 aa13.02□□□□□ -0.32
CDH1-202ENST00000422392 STAG3L2P0CL84 134 aa13.02□□□□□ -0.32
CDH1-202ENST00000422392 STAG3L3P0CL85 134 aa13.02□□□□□ -0.32
CDH1-202ENST00000422392 AARDQ4LEZ3 155 aa13.02□□□□□ -0.32
CDH1-202ENST00000422392 ARSJQ5FYB0 599 aaPredicted RBP13.02□□□□□ -0.32
CDH1-202ENST00000422392 TRAT1Q6PIZ9 186 aa13.02□□□□□ -0.32
CDH1-202ENST00000422392 BHLHA15Q7RTS1 189 aaPredicted RBP13.02□□□□□ -0.32
CDH1-202ENST00000422392 FAM122AQ96E09 287 aa13.02□□□□□ -0.32
CDH1-202ENST00000422392 ACY3Q96HD9 319 aa13.02□□□□□ -0.32
CDH1-202ENST00000422392 SFRP2Q96HF1 295 aa13.02□□□□□ -0.32
CDH1-202ENST00000422392 YPEL2Q96QA6 119 aa13.02□□□□□ -0.32
CDH1-202ENST00000422392 HINT2Q9BX68 163 aa13.02□□□□□ -0.32
CDH1-202ENST00000422392 M0R1B8 84 aa13.02□□□□□ -0.33
CDH1-202ENST00000422392 TMPRSS2O15393 492 aa13.02□□□□□ -0.33
CDH1-202ENST00000422392 PDLIM4P50479 330 aa13.02□□□□□ -0.33
CDH1-202ENST00000422392 CNN1P51911 297 aaKnown RBP13.02□□□□□ -0.33
CDH1-202ENST00000422392 RPL15P61313 204 aaKnown RBP13.02□□□□□ -0.33
CDH1-202ENST00000422392 DNLZQ5SXM8 178 aa13.02□□□□□ -0.33
CDH1-202ENST00000422392 REC114Q7Z4M0 266 aa13.02□□□□□ -0.33
CDH1-202ENST00000422392 CALYQ9NYX4 217 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms