RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 DMBX1Q8NFW5 382 aa11.45□□□□□ -0.58
SHMT1P1-201ENST00000419974 TMEM167AQ8TBQ9 72 aa11.45□□□□□ -0.58
SHMT1P1-201ENST00000419974 WDR89Q96FK6 387 aaPredicted RBP11.45□□□□□ -0.58
SHMT1P1-201ENST00000419974 HARBI1Q96MB7 349 aa11.45□□□□□ -0.58
SHMT1P1-201ENST00000419974 RNF126Q9BV68 326 aa11.45□□□□□ -0.58
SHMT1P1-201ENST00000419974 PRDM13Q9H4Q3 707 aa11.45□□□□□ -0.58
SHMT1P1-201ENST00000419974 C11orf1Q9H5F2 150 aa11.45□□□□□ -0.58
SHMT1P1-201ENST00000419974 FKBP11Q9NYL4 201 aa11.45□□□□□ -0.58
SHMT1P1-201ENST00000419974 CACNG5Q9UF02 275 aa11.45□□□□□ -0.58
SHMT1P1-201ENST00000419974 PRNDQ9UKY0 176 aa11.45□□□□□ -0.58
SHMT1P1-201ENST00000419974 FOXA2Q9Y261 457 aaPredicted RBP11.45□□□□□ -0.58
SHMT1P1-201ENST00000419974 FN1P02751 2386 aaKnown RBP11.45□□□□□ -0.58
SHMT1P1-201ENST00000419974 TRAV40A0A0B4J280 105 aa11.44□□□□□ -0.58
SHMT1P1-201ENST00000419974 INS-IGF2F8WCM5 200 aa11.44□□□□□ -0.58
SHMT1P1-201ENST00000419974 K7EPK0 472 aa11.44□□□□□ -0.58
SHMT1P1-201ENST00000419974 UPK2O00526 184 aa11.44□□□□□ -0.58
SHMT1P1-201ENST00000419974 SMAD7O15105 426 aaKnown RBP11.44□□□□□ -0.58
SHMT1P1-201ENST00000419974 CD5LO43866 347 aa11.44□□□□□ -0.58
SHMT1P1-201ENST00000419974 KBTBD11O94819 623 aa11.44□□□□□ -0.58
SHMT1P1-201ENST00000419974 NDUFA3O95167 84 aa11.44□□□□□ -0.58
SHMT1P1-201ENST00000419974 MOSP00540 346 aa11.44□□□□□ -0.58
SHMT1P1-201ENST00000419974 RLN2P04090 185 aa11.44□□□□□ -0.58
SHMT1P1-201ENST00000419974 FAM106CPP0CH98 169 aa11.44□□□□□ -0.58
SHMT1P1-201ENST00000419974 TAS2R30P59541 319 aa11.44□□□□□ -0.58
SHMT1P1-201ENST00000419974 RAB32Q13637 225 aa11.44□□□□□ -0.58
SHMT1P1-201ENST00000419974 VMA21Q3ZAQ7 101 aa11.44□□□□□ -0.58
SHMT1P1-201ENST00000419974 Q5BKY6 102 aa11.44□□□□□ -0.58
SHMT1P1-201ENST00000419974 OR4A47Q6IF82 309 aa11.44□□□□□ -0.58
SHMT1P1-201ENST00000419974 DYNAPQ8N1N2 210 aa11.44□□□□□ -0.58
SHMT1P1-201ENST00000419974 FAM71E2Q8N5Q1 922 aa11.44□□□□□ -0.58
SHMT1P1-201ENST00000419974 OR11H4Q8NGC9 324 aa11.44□□□□□ -0.58
SHMT1P1-201ENST00000419974 OR2T10Q8NGZ9 312 aa11.44□□□□□ -0.58
SHMT1P1-201ENST00000419974 RNASE11Q8TAA1 199 aaKnown RBP11.44□□□□□ -0.58
SHMT1P1-201ENST00000419974 THAP6Q8TBB0 222 aa11.44□□□□□ -0.58
SHMT1P1-201ENST00000419974 NANPQ8TBE9 248 aa11.44□□□□□ -0.58
SHMT1P1-201ENST00000419974 TMEM160Q9NX00 188 aa11.44□□□□□ -0.58
SHMT1P1-201ENST00000419974 GSKIPQ9P0R6 139 aa11.44□□□□□ -0.58
SHMT1P1-201ENST00000419974 NUP50Q9UKX7 468 aa11.44□□□□□ -0.58
SHMT1P1-201ENST00000419974 HILPDAQ9Y5L2 63 aa11.44□□□□□ -0.58
SHMT1P1-201ENST00000419974 CR1P17927 2039 aa11.43□□□□□ -0.58
SHMT1P1-201ENST00000419974 C15orf61A6NNL5 157 aa11.43□□□□□ -0.58
SHMT1P1-201ENST00000419974 H0YIZ8 118 aa11.43□□□□□ -0.58
SHMT1P1-201ENST00000419974 MED6O75586 246 aa11.43□□□□□ -0.58
SHMT1P1-201ENST00000419974 SAA1P0DJI8 122 aaPredicted RBP11.43□□□□□ -0.58
SHMT1P1-201ENST00000419974 IGHV4-38-2P0DP08 117 aa11.43□□□□□ -0.58
SHMT1P1-201ENST00000419974 MAS1LP35410 378 aa11.43□□□□□ -0.58
SHMT1P1-201ENST00000419974 SPCS3P61009 180 aa11.43□□□□□ -0.58
SHMT1P1-201ENST00000419974 RPS16P62249 146 aaKnown RBP11.43□□□□□ -0.58
SHMT1P1-201ENST00000419974 TNFRSF9Q07011 255 aa11.43□□□□□ -0.58
SHMT1P1-201ENST00000419974 ZNF345Q14585 488 aa11.43□□□□□ -0.58
SHMT1P1-201ENST00000419974 Q71RC1 249 aaPredicted RBP11.43□□□□□ -0.58
SHMT1P1-201ENST00000419974 MAPK1IP1LQ8NDC0 245 aa11.43□□□□□ -0.58
SHMT1P1-201ENST00000419974 OR5B3Q8NH48 314 aa11.43□□□□□ -0.58
SHMT1P1-201ENST00000419974 RAB40CQ96S21 281 aa11.43□□□□□ -0.58
SHMT1P1-201ENST00000419974 E5RGE8 158 aa11.42□□□□□ -0.58
SHMT1P1-201ENST00000419974 FBP1P09467 338 aa11.42□□□□□ -0.58
SHMT1P1-201ENST00000419974 OR9G9P0C7N8 305 aa11.42□□□□□ -0.58
SHMT1P1-201ENST00000419974 KRTAP1-1Q07627 177 aa11.42□□□□□ -0.58
SHMT1P1-201ENST00000419974 PSG5Q15238 335 aa11.42□□□□□ -0.58
SHMT1P1-201ENST00000419974 CXorf66Q5JRM2 361 aaPredicted RBP11.42□□□□□ -0.58
SHMT1P1-201ENST00000419974 PDZD9Q8IXQ8 264 aa11.42□□□□□ -0.58
SHMT1P1-201ENST00000419974 OR4A16Q8NH70 328 aa11.42□□□□□ -0.58
SHMT1P1-201ENST00000419974 OR1S1Q8NH92 325 aa11.42□□□□□ -0.58
SHMT1P1-201ENST00000419974 C17orf50Q8WW18 174 aa11.42□□□□□ -0.58
SHMT1P1-201ENST00000419974 EAF1Q96JC9 268 aaPredicted RBP11.42□□□□□ -0.58
SHMT1P1-201ENST00000419974 TNFSF18Q9UNG2 199 aa11.42□□□□□ -0.58
SHMT1P1-201ENST00000419974 RCL1Q9Y2P8 373 aaKnown RBP11.42□□□□□ -0.58
SHMT1P1-201ENST00000419974 NSG2Q9Y328 171 aa11.42□□□□□ -0.58
SHMT1P1-201ENST00000419974 WSB1Q9Y6I7 421 aa11.42□□□□□ -0.58
SHMT1P1-201ENST00000419974 BOLA2-SMG1P6H3BVE0 249 aa11.41□□□□□ -0.58
SHMT1P1-201ENST00000419974 SYNGR2O43760 224 aa11.41□□□□□ -0.58
SHMT1P1-201ENST00000419974 P2RY1P47900 373 aa11.41□□□□□ -0.58
SHMT1P1-201ENST00000419974 ATP5IP56385 69 aaPredicted RBP11.41□□□□□ -0.58
SHMT1P1-201ENST00000419974 HSPE1P61604 102 aaKnown RBP11.41□□□□□ -0.58
SHMT1P1-201ENST00000419974 MRGPRG-AS1Q2M3A8 158 aa11.41□□□□□ -0.58
SHMT1P1-201ENST00000419974 ZNF546Q86UE3 836 aa11.41□□□□□ -0.58
SHMT1P1-201ENST00000419974 SMIM8Q96KF7 97 aa11.41□□□□□ -0.58
SHMT1P1-201ENST00000419974 AQP10Q96PS8 301 aa11.41□□□□□ -0.58
SHMT1P1-201ENST00000419974 CIB3Q96Q77 187 aaPredicted RBP11.41□□□□□ -0.58
SHMT1P1-201ENST00000419974 PLSCR3Q9NRY6 295 aa11.41□□□□□ -0.58
SHMT1P1-201ENST00000419974 C1RLQ9NZP8 487 aa11.41□□□□□ -0.58
SHMT1P1-201ENST00000419974 SIGLEC9Q9Y336 463 aa11.41□□□□□ -0.58
SHMT1P1-201ENST00000419974 IGHV3-72A0A0B4J1Y9 119 aa11.4□□□□□ -0.58
SHMT1P1-201ENST00000419974 OR2F2O95006 317 aa11.4□□□□□ -0.58
SHMT1P1-201ENST00000419974 SCAF4O95104 1147 aaKnown RBP11.4□□□□□ -0.58
SHMT1P1-201ENST00000419974 IGKV1D-33P01593 117 aa11.4□□□□□ -0.58
SHMT1P1-201ENST00000419974 IGKV1-33P01594 117 aa11.4□□□□□ -0.58
SHMT1P1-201ENST00000419974 SNRNP70P08621 437 aaKnown RBP11.4□□□□□ -0.58
SHMT1P1-201ENST00000419974 PVALBP20472 110 aaPredicted RBP11.4□□□□□ -0.58
SHMT1P1-201ENST00000419974 RPL8P62917 257 aaKnown RBP11.4□□□□□ -0.58
SHMT1P1-201ENST00000419974 OR2F1Q13607 317 aa11.4□□□□□ -0.58
SHMT1P1-201ENST00000419974 PRSS8Q16651 343 aa11.4□□□□□ -0.58
SHMT1P1-201ENST00000419974 IZUMO4Q1ZYL8 232 aa11.4□□□□□ -0.58
SHMT1P1-201ENST00000419974 PPP1R27Q86WC6 154 aa11.4□□□□□ -0.58
SHMT1P1-201ENST00000419974 MMD2Q8IY49 270 aa11.4□□□□□ -0.58
SHMT1P1-201ENST00000419974 VKORC1L1Q8N0U8 176 aa11.4□□□□□ -0.58
SHMT1P1-201ENST00000419974 PIFOQ8TCI5 191 aa11.4□□□□□ -0.58
SHMT1P1-201ENST00000419974 RITA1Q96K30 269 aa11.4□□□□□ -0.58
SHMT1P1-201ENST00000419974 SRSF8Q9BRL6 282 aaKnown RBP11.4□□□□□ -0.58
SHMT1P1-201ENST00000419974 MBD2Q9UBB5 411 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms