RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 BHLHE23Q8NDY6 225 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 OR8B12Q8NGG6 310 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 OR1K1Q8NGR3 316 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 OR1P1Q8NH06 330 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 OR2V1Q8NHB1 315 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 CLDND2Q8NHS1 167 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 RNASE8Q8TDE3 154 aaKnown RBP2.07□□□□□ -2.08
VPS41-206ENST00000418457 DOK4Q8TEW6 326 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 ZNF721Q8TF20 911 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 MBD3L1Q8WWY6 194 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 C11orf40Q8WZ69 217 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 FRZBQ92765 325 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 TMEM56Q96MV1 263 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 OR5B12Q96R08 314 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 IMMP2LQ96T52 175 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 HIST1H2BLQ99880 126 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 SPAG8Q99932 426 aaPredicted RBP2.07□□□□□ -2.08
VPS41-206ENST00000418457 DDA1Q9BW61 102 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 MRPL13Q9BYD1 178 aaKnown RBP2.07□□□□□ -2.08
VPS41-206ENST00000418457 MRPL37Q9BZE1 423 aaKnown RBP2.07□□□□□ -2.08
VPS41-206ENST00000418457 GPR61Q9BZJ8 451 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 SMIM3Q9BZL3 60 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 OR8D2Q9GZM6 311 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 NXF5Q9H1B4 397 aaKnown RBP2.07□□□□□ -2.08
VPS41-206ENST00000418457 CXXC4Q9H2H0 198 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 BANF2Q9H503 90 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 C11orf1Q9H5F2 150 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 WFDC1Q9HC57 220 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 CRLF2Q9HC73 371 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 SLC2A9Q9NRM0 540 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 STARD5Q9NSY2 213 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 TECRQ9NZ01 308 aaKnown RBP2.07□□□□□ -2.08
VPS41-206ENST00000418457 NAT8Q9UHE5 227 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 SLC7A11Q9UPY5 501 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 RCL1Q9Y2P8 373 aaKnown RBP2.07□□□□□ -2.08
VPS41-206ENST00000418457 TIMM9Q9Y5J7 89 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 SLCO1B1Q9Y6L6 691 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 TMEM56-RWDD3S4R434 201 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 GOLGA4Q13439 2230 aaKnown RBP2.07□□□□□ -2.08
VPS41-206ENST00000418457 YLPM1P49750 1951 aaKnown RBP2.07□□□□□ -2.08
VPS41-206ENST00000418457 C2orf16Q68DN1 1984 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 CHD7Q9P2D1 2997 aa2.07□□□□□ -2.08
VPS41-206ENST00000418457 PHF3Q92576 2039 aaKnown RBP2.07□□□□□ -2.08
VPS41-206ENST00000418457 ZFHX4Q86UP3 3567 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 DOCK9Q9BZ29 2069 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 TRAV9-1A0A075B6T8 112 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 IGLV3-32A0A0A0MS00 114 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 TGIF2-C20orf24A0A0A6YYL0 155 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 KIR2DL5BA0A0G2JN68 375 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 KIR2DL5BA0A0G2JPC4 375 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 KIR2DS1A0A191URI9 304 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 C3orf85A0A1B0GTC6 90 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 IGSF23A1L1A6 192 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 XKRY2A2RUG3 117 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 TMEM210A6NLX4 147 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 RNF212BA8MTL3 300 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 ZNF727A8MUV8 499 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 H0Y980 276 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 H0YL77 283 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 H7BYZ3 331 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 NDUFS8O00217 210 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 PHOX2AO14813 284 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 HMGB3O15347 200 aaKnown RBP2.06□□□□□ -2.08
VPS41-206ENST00000418457 PHF1O43189 567 aaPredicted RBP2.06□□□□□ -2.08
VPS41-206ENST00000418457 XRCC2O43543 280 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 RAMP1O60894 148 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 PDCD6O75340 191 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 VAMP5O95183 116 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 MPZL1O95297 269 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 SEMA4FO95754 770 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 HRASP01112 189 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 PDGFBP01127 241 aaPredicted RBP2.06□□□□□ -2.08
VPS41-206ENST00000418457 HLA-HP01893 362 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 MBP02144 154 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 TYMSP04818 313 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 PFN1P07737 140 aaKnown RBP2.06□□□□□ -2.08
VPS41-206ENST00000418457 CST2P09228 141 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 PGA4P0DJD7 388 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 RD3LP0DJH9 198 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 GZMBP10144 247 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 CTSEP14091 401 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 MSR1P21757 451 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 VDAC1P21796 283 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 OR10J1P30954 320 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 OTX1P32242 354 aaPredicted RBP2.06□□□□□ -2.08
VPS41-206ENST00000418457 KIR2DS4P43632 304 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 NPBWR2P48146 333 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 IDH3GP51553 393 aaPredicted RBP2.06□□□□□ -2.08
VPS41-206ENST00000418457 BIDP55957 195 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 UBE2NP61088 152 aaKnown RBP2.06□□□□□ -2.08
VPS41-206ENST00000418457 RAB11AP62491 216 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 PAFAH1B2P68402 229 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 HIST1H3AP68431 136 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 HBG1P69891 147 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 HBG2P69892 147 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 RPL19P84098 196 aaKnown RBP2.06□□□□□ -2.08
VPS41-206ENST00000418457 FMODQ06828 376 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 TNFRSF9Q07011 255 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 KIR2DS1Q14954 304 aa2.06□□□□□ -2.08
VPS41-206ENST00000418457 RAB35Q15286 201 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms