RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 SVEP1Q4LDE5 3571 aa11.05□□□□□ -0.64
TNFRSF8-203ENST00000417814 OR5B21A6NL26 309 aa11.05□□□□□ -0.64
TNFRSF8-203ENST00000417814 H1FXQ92522 213 aaKnown RBP11.05□□□□□ -0.64
TNFRSF8-203ENST00000417814 BTF3L4Q96K17 158 aa11.05□□□□□ -0.64
TNFRSF8-203ENST00000417814 PLSCR2Q9NRY7 297 aa11.05□□□□□ -0.64
TNFRSF8-203ENST00000417814 LRBAP50851 2863 aa11.05□□□□□ -0.64
TNFRSF8-203ENST00000417814 CLDN14O95500 239 aa11.05□□□□□ -0.64
TNFRSF8-203ENST00000417814 SPRNQ5BIV9 151 aa11.05□□□□□ -0.64
TNFRSF8-203ENST00000417814 RIMS4Q9H426 269 aaPredicted RBP11.05□□□□□ -0.64
TNFRSF8-203ENST00000417814 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.04□□□□□ -0.64
TNFRSF8-203ENST00000417814 LRRC30A6NM36 301 aa11.04□□□□□ -0.64
TNFRSF8-203ENST00000417814 ENSAO43768 121 aaKnown RBP11.04□□□□□ -0.64
TNFRSF8-203ENST00000417814 NUPR1O60356 82 aa11.04□□□□□ -0.64
TNFRSF8-203ENST00000417814 IGHV1-2P23083 117 aa11.04□□□□□ -0.64
TNFRSF8-203ENST00000417814 CCL8P80075 99 aa11.04□□□□□ -0.64
TNFRSF8-203ENST00000417814 TMEM208Q9BTX3 173 aa11.04□□□□□ -0.64
TNFRSF8-203ENST00000417814 NPCDR1Q9BY65 106 aa11.04□□□□□ -0.64
TNFRSF8-203ENST00000417814 A0A1W2PNU3 283 aaPredicted RBP11.04□□□□□ -0.64
TNFRSF8-203ENST00000417814 CD1BP29016 333 aa11.04□□□□□ -0.64
TNFRSF8-203ENST00000417814 JOSD1Q15040 202 aaPredicted RBP11.04□□□□□ -0.64
TNFRSF8-203ENST00000417814 TBX15Q96SF7 602 aa11.04□□□□□ -0.64
TNFRSF8-203ENST00000417814 TMEM147Q9BVK8 224 aa11.04□□□□□ -0.64
TNFRSF8-203ENST00000417814 RYDENQ9NUL5 291 aaKnown RBP11.04□□□□□ -0.64
TNFRSF8-203ENST00000417814 CISD1Q9NZ45 108 aaKnown RBP11.04□□□□□ -0.64
TNFRSF8-203ENST00000417814 PITPNC1Q9UKF7 332 aa11.04□□□□□ -0.64
TNFRSF8-203ENST00000417814 TCF21O43680 179 aa11.03□□□□□ -0.64
TNFRSF8-203ENST00000417814 FOXL2NBQ6ZUU3 175 aa11.03□□□□□ -0.64
TNFRSF8-203ENST00000417814 HIPK2Q9H2X6 1198 aa11.03□□□□□ -0.64
TNFRSF8-203ENST00000417814 FCN1O00602 326 aa11.03□□□□□ -0.64
TNFRSF8-203ENST00000417814 SMPD2O60906 423 aa11.03□□□□□ -0.64
TNFRSF8-203ENST00000417814 PAX5Q02548 391 aa11.03□□□□□ -0.64
TNFRSF8-203ENST00000417814 ASCL4Q6XD76 172 aa11.03□□□□□ -0.64
TNFRSF8-203ENST00000417814 TGIF2LYQ8IUE0 185 aa11.03□□□□□ -0.64
TNFRSF8-203ENST00000417814 OR5R1Q8NH85 324 aa11.03□□□□□ -0.64
TNFRSF8-203ENST00000417814 S1PR3Q99500 378 aa11.03□□□□□ -0.64
TNFRSF8-203ENST00000417814 ASCL2Q99929 193 aa11.03□□□□□ -0.64
TNFRSF8-203ENST00000417814 NTN3O00634 580 aaPredicted RBP11.03□□□□□ -0.64
TNFRSF8-203ENST00000417814 REG1AP05451 166 aa11.03□□□□□ -0.64
TNFRSF8-203ENST00000417814 TFPI2P48307 235 aa11.03□□□□□ -0.64
TNFRSF8-203ENST00000417814 Q6P435 159 aa11.03□□□□□ -0.64
TNFRSF8-203ENST00000417814 KCNIP4Q6PIL6 250 aa11.03□□□□□ -0.64
TNFRSF8-203ENST00000417814 SNIP1Q8TAD8 396 aaKnown RBP11.03□□□□□ -0.64
TNFRSF8-203ENST00000417814 ATG2AQ2TAZ0 1938 aa11.03□□□□□ -0.64
TNFRSF8-203ENST00000417814 CEP192Q8TEP8 1941 aa11.03□□□□□ -0.64
TNFRSF8-203ENST00000417814 SPENQ96T58 3664 aaKnown RBP11.02□□□□□ -0.64
TNFRSF8-203ENST00000417814 CTXND1A0A1B0GTU2 59 aa11.02□□□□□ -0.64
TNFRSF8-203ENST00000417814 MKRN2OSH3BPM6 223 aa11.02□□□□□ -0.64
TNFRSF8-203ENST00000417814 CAMPP49913 170 aa11.02□□□□□ -0.64
TNFRSF8-203ENST00000417814 PSG5Q15238 335 aa11.02□□□□□ -0.64
TNFRSF8-203ENST00000417814 TDRG1Q3Y452 100 aa11.02□□□□□ -0.64
TNFRSF8-203ENST00000417814 RNF138Q8WVD3 245 aa11.02□□□□□ -0.64
TNFRSF8-203ENST00000417814 IL36GQ9NZH8 169 aa11.02□□□□□ -0.64
TNFRSF8-203ENST00000417814 KLF13Q9Y2Y9 288 aaPredicted RBP11.02□□□□□ -0.64
TNFRSF8-203ENST00000417814 MLNRO43193 412 aa11.02□□□□□ -0.65
TNFRSF8-203ENST00000417814 CEACAM1P13688 526 aa11.02□□□□□ -0.65
TNFRSF8-203ENST00000417814 ACOT6Q3I5F7 207 aaPredicted RBP11.02□□□□□ -0.65
TNFRSF8-203ENST00000417814 FAM19A2Q8N3H0 131 aa11.02□□□□□ -0.65
TNFRSF8-203ENST00000417814 RPRMLQ8N4K4 120 aa11.02□□□□□ -0.65
TNFRSF8-203ENST00000417814 FDCSPQ8NFU4 85 aa11.02□□□□□ -0.65
TNFRSF8-203ENST00000417814 TMEM18Q96B42 140 aa11.02□□□□□ -0.65
TNFRSF8-203ENST00000417814 MS4A5Q9H3V2 200 aa11.02□□□□□ -0.65
TNFRSF8-203ENST00000417814 RNF212BA8MTL3 300 aa11.02□□□□□ -0.65
TNFRSF8-203ENST00000417814 F2Z2F3 143 aa11.02□□□□□ -0.65
TNFRSF8-203ENST00000417814 DLEU1O43261 78 aa11.02□□□□□ -0.65
TNFRSF8-203ENST00000417814 KBTBD11O94819 623 aa11.02□□□□□ -0.65
TNFRSF8-203ENST00000417814 CGAP01215 116 aa11.02□□□□□ -0.65
TNFRSF8-203ENST00000417814 SUMO1P63165 101 aaKnown RBP11.02□□□□□ -0.65
TNFRSF8-203ENST00000417814 OR8I2Q8N0Y5 310 aa11.02□□□□□ -0.65
TNFRSF8-203ENST00000417814 CCL13Q99616 98 aa11.02□□□□□ -0.65
TNFRSF8-203ENST00000417814 FKBP11Q9NYL4 201 aa11.02□□□□□ -0.65
TNFRSF8-203ENST00000417814 PXMP4Q9Y6I8 212 aa11.02□□□□□ -0.65
TNFRSF8-203ENST00000417814 IGLV2-14P01704 120 aa11.01□□□□□ -0.65
TNFRSF8-203ENST00000417814 PRDX2P32119 198 aa11.01□□□□□ -0.65
TNFRSF8-203ENST00000417814 DEFB124Q8NES8 71 aa11.01□□□□□ -0.65
TNFRSF8-203ENST00000417814 BLNKQ8WV28 456 aa11.01□□□□□ -0.65
TNFRSF8-203ENST00000417814 IGFBPL1Q8WX77 278 aa11.01□□□□□ -0.65
TNFRSF8-203ENST00000417814 C5orf30Q96GV9 206 aa11.01□□□□□ -0.65
TNFRSF8-203ENST00000417814 SEPSECSQ9HD40 501 aaKnown RBP11.01□□□□□ -0.65
TNFRSF8-203ENST00000417814 AKAP13Q12802 2813 aa11.01□□□□□ -0.65
TNFRSF8-203ENST00000417814 RPLP1P05386 114 aaKnown RBP11.01□□□□□ -0.65
TNFRSF8-203ENST00000417814 NPPCP23582 126 aa11.01□□□□□ -0.65
TNFRSF8-203ENST00000417814 IL3RAP26951 378 aa11.01□□□□□ -0.65
TNFRSF8-203ENST00000417814 BCL2L2Q92843 193 aaPredicted RBP11.01□□□□□ -0.65
TNFRSF8-203ENST00000417814 COQ2Q96H96 371 aa11.01□□□□□ -0.65
TNFRSF8-203ENST00000417814 HSPB9Q9BQS6 159 aa11.01□□□□□ -0.65
TNFRSF8-203ENST00000417814 TPPP3Q9BW30 176 aa11.01□□□□□ -0.65
TNFRSF8-203ENST00000417814 RNASE7Q9H1E1 156 aaKnown RBP11.01□□□□□ -0.65
TNFRSF8-203ENST00000417814 SH2D2AQ9NP31 389 aa11.01□□□□□ -0.65
TNFRSF8-203ENST00000417814 PARD6AQ9NPB6 346 aa11.01□□□□□ -0.65
TNFRSF8-203ENST00000417814 NAT8BQ9UHF3 227 aa11.01□□□□□ -0.65
TNFRSF8-203ENST00000417814 C10orf142B7Z368 130 aa11.01□□□□□ -0.65
TNFRSF8-203ENST00000417814 C17orf112F2Z3M2 114 aa11.01□□□□□ -0.65
TNFRSF8-203ENST00000417814 IGHEP01854 428 aa11.01□□□□□ -0.65
TNFRSF8-203ENST00000417814 CRYBB3P26998 211 aa11.01□□□□□ -0.65
TNFRSF8-203ENST00000417814 GNB1P62873 340 aa11.01□□□□□ -0.65
TNFRSF8-203ENST00000417814 ZNF497Q6ZNH5 498 aa11.01□□□□□ -0.65
TNFRSF8-203ENST00000417814 LINC00479Q96M42 142 aa11.01□□□□□ -0.65
TNFRSF8-203ENST00000417814 TECTBQ96PL2 329 aa11.01□□□□□ -0.65
TNFRSF8-203ENST00000417814 MANBALQ9NQG1 85 aa11.01□□□□□ -0.65
TNFRSF8-203ENST00000417814 CLCF1Q9UBD9 225 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms