RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 VSTM2AQ8TAG5 236 aa13.62□□□□□ -0.23
CPNE1-210ENST00000416778 SECTM1Q8WVN6 248 aa13.62□□□□□ -0.23
CPNE1-210ENST00000416778 RSRP1Q9BUV0 290 aa13.62□□□□□ -0.23
CPNE1-210ENST00000416778 SIGLEC8Q9NYZ4 499 aa13.62□□□□□ -0.23
CPNE1-210ENST00000416778 DMRT1Q9Y5R6 373 aa13.62□□□□□ -0.23
CPNE1-210ENST00000416778 A0A087WXM4 84 aa13.61□□□□□ -0.23
CPNE1-210ENST00000416778 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.61□□□□□ -0.23
CPNE1-210ENST00000416778 TNFSF12O43508 249 aa13.61□□□□□ -0.23
CPNE1-210ENST00000416778 HRASP01112 189 aa13.61□□□□□ -0.23
CPNE1-210ENST00000416778 ZNF735P0CB33 412 aa13.61□□□□□ -0.23
CPNE1-210ENST00000416778 MAS1LP35410 378 aa13.61□□□□□ -0.23
CPNE1-210ENST00000416778 CBX5P45973 191 aa13.61□□□□□ -0.23
CPNE1-210ENST00000416778 SLC25A42Q86VD7 318 aa13.61□□□□□ -0.23
CPNE1-210ENST00000416778 OR13F1Q8NGS4 319 aa13.61□□□□□ -0.23
CPNE1-210ENST00000416778 SLC5A7Q9GZV3 580 aa13.61□□□□□ -0.23
CPNE1-210ENST00000416778 SLC2A9Q9NRM0 540 aa13.61□□□□□ -0.23
CPNE1-210ENST00000416778 BMPR1BO00238 502 aa13.6□□□□□ -0.23
CPNE1-210ENST00000416778 CRYGCP07315 174 aa13.6□□□□□ -0.23
CPNE1-210ENST00000416778 KIR2DS2P43631 304 aa13.6□□□□□ -0.23
CPNE1-210ENST00000416778 LSM3P62310 102 aaKnown RBP13.6□□□□□ -0.23
CPNE1-210ENST00000416778 RPEL1Q2QD12 228 aa13.6□□□□□ -0.23
CPNE1-210ENST00000416778 KLK9Q2XQG4 91 aa13.6□□□□□ -0.23
CPNE1-210ENST00000416778 C19orf73Q9NVV2 129 aa13.6□□□□□ -0.23
CPNE1-210ENST00000416778 KLK9Q9UKQ9 250 aa13.6□□□□□ -0.23
CPNE1-210ENST00000416778 ZNF257Q9Y2Q1 563 aa13.6□□□□□ -0.23
CPNE1-210ENST00000416778 MEIS3P1A6NDR6 274 aa13.59□□□□□ -0.23
CPNE1-210ENST00000416778 NPIPB5A8MRT5 1133 aa13.59□□□□□ -0.23
CPNE1-210ENST00000416778 A8MZ25 164 aa13.59□□□□□ -0.23
CPNE1-210ENST00000416778 H0Y980 276 aa13.59□□□□□ -0.23
CPNE1-210ENST00000416778 RBFOX2O43251 390 aaKnown RBP eCLIP13.59□□□□□ -0.233e-14■■■■■ 31.7
CPNE1-210ENST00000416778 OR2J3O76001 311 aa13.59□□□□□ -0.23
CPNE1-210ENST00000416778 GNRHRP30968 328 aa13.59□□□□□ -0.23
CPNE1-210ENST00000416778 RPL27AP46776 148 aaKnown RBP13.59□□□□□ -0.23
CPNE1-210ENST00000416778 C19orf35Q6ZS72 473 aa13.59□□□□□ -0.23
CPNE1-210ENST00000416778 SSX9Q7RTT3 188 aa13.59□□□□□ -0.23
CPNE1-210ENST00000416778 SPAG16Q8N0X2 631 aa13.59□□□□□ -0.23
CPNE1-210ENST00000416778 FANCD2OSQ96PS1 177 aa13.59□□□□□ -0.23
CPNE1-210ENST00000416778 FYTTD1Q96QD9 318 aaKnown RBP13.59□□□□□ -0.23
CPNE1-210ENST00000416778 BET1LQ9NYM9 111 aa13.59□□□□□ -0.23
CPNE1-210ENST00000416778 CGB1A6NKQ9 187 aa13.58□□□□□ -0.24
CPNE1-210ENST00000416778 SULT1C2O00338 296 aa13.58□□□□□ -0.24
CPNE1-210ENST00000416778 IGHV4-30-4P0DP06 118 aa13.58□□□□□ -0.24
CPNE1-210ENST00000416778 MYOD1P15172 320 aa13.58□□□□□ -0.24
CPNE1-210ENST00000416778 NAT1P18440 290 aa13.58□□□□□ -0.24
CPNE1-210ENST00000416778 RFX2P48378 723 aa13.58□□□□□ -0.24
CPNE1-210ENST00000416778 FXYD4P59646 89 aa13.58□□□□□ -0.24
CPNE1-210ENST00000416778 RPL8P62917 257 aaKnown RBP13.58□□□□□ -0.24
CPNE1-210ENST00000416778 EXOSC2Q13868 293 aaKnown RBP13.58□□□□□ -0.24
CPNE1-210ENST00000416778 C15orf32Q32M92 178 aa13.58□□□□□ -0.24
CPNE1-210ENST00000416778 UBE2NLQ5JXB2 153 aa13.58□□□□□ -0.24
CPNE1-210ENST00000416778 OR4A47Q6IF82 309 aa13.58□□□□□ -0.24
CPNE1-210ENST00000416778 ADAMTSL5Q6ZMM2 481 aa13.58□□□□□ -0.24
CPNE1-210ENST00000416778 ZNF818PQ6ZRF7 136 aa13.58□□□□□ -0.24
CPNE1-210ENST00000416778 LYSMD2Q8IV50 215 aa13.58□□□□□ -0.24
CPNE1-210ENST00000416778 OR4A5Q8NH83 315 aa13.58□□□□□ -0.24
CPNE1-210ENST00000416778 AIFM2Q9BRQ8 373 aa13.58□□□□□ -0.24
CPNE1-210ENST00000416778 THAP7Q9BT49 309 aaPredicted RBP13.58□□□□□ -0.24
CPNE1-210ENST00000416778 FBXL7Q9UJT9 491 aa13.58□□□□□ -0.24
CPNE1-210ENST00000416778 ANAPC10Q9UM13 185 aa13.58□□□□□ -0.24
CPNE1-210ENST00000416778 NDUFB8O95169 186 aa13.57□□□□□ -0.24
CPNE1-210ENST00000416778 TNFAIP8O95379 198 aa13.57□□□□□ -0.24
CPNE1-210ENST00000416778 HPRT1P00492 218 aa13.57□□□□□ -0.24
CPNE1-210ENST00000416778 AREGP15514 252 aa13.57□□□□□ -0.24
CPNE1-210ENST00000416778 HLA-GP17693 338 aa13.57□□□□□ -0.24
CPNE1-210ENST00000416778 PSMB6P28072 239 aa13.57□□□□□ -0.24
CPNE1-210ENST00000416778 POU2AF1Q16633 256 aa13.57□□□□□ -0.24
CPNE1-210ENST00000416778 SAMD12Q8N8I0 201 aa13.57□□□□□ -0.24
CPNE1-210ENST00000416778 TRAV3A0A0B4J244 114 aa13.56□□□□□ -0.24
CPNE1-210ENST00000416778 DPPA5A6NC42 116 aa13.56□□□□□ -0.24
CPNE1-210ENST00000416778 IZUMO1RA6ND01 250 aa13.56□□□□□ -0.24
CPNE1-210ENST00000416778 UPK2O00526 184 aa13.56□□□□□ -0.24
CPNE1-210ENST00000416778 CTRB1P17538 263 aa13.56□□□□□ -0.24
CPNE1-210ENST00000416778 TAS2R31P59538 309 aa13.56□□□□□ -0.24
CPNE1-210ENST00000416778 TAS2R20P59543 309 aa13.56□□□□□ -0.24
CPNE1-210ENST00000416778 CTRB2Q6GPI1 263 aa13.56□□□□□ -0.24
CPNE1-210ENST00000416778 SLC25A46Q96AG3 418 aa13.56□□□□□ -0.24
CPNE1-210ENST00000416778 KCTD12Q96CX2 325 aaKnown RBP13.56□□□□□ -0.24
CPNE1-210ENST00000416778 RCHY1Q96PM5 261 aa13.56□□□□□ -0.24
CPNE1-210ENST00000416778 VCX3AQ9NNX9 186 aa13.56□□□□□ -0.24
CPNE1-210ENST00000416778 PEMTQ9UBM1 199 aa13.56□□□□□ -0.24
CPNE1-210ENST00000416778 PPP5D1E7EU14 171 aa13.55□□□□□ -0.24
CPNE1-210ENST00000416778 PGLYRP1O75594 196 aaPredicted RBP13.55□□□□□ -0.24
CPNE1-210ENST00000416778 OR2C1O95371 312 aa13.55□□□□□ -0.24
CPNE1-210ENST00000416778 PMP2P02689 132 aa13.55□□□□□ -0.24
CPNE1-210ENST00000416778 NQO2P16083 231 aa13.55□□□□□ -0.24
CPNE1-210ENST00000416778 PRSS3P35030 304 aa13.55□□□□□ -0.24
CPNE1-210ENST00000416778 OR2B8PP59922 312 aa13.55□□□□□ -0.24
CPNE1-210ENST00000416778 FAM209BQ5JX69 171 aa13.55□□□□□ -0.24
CPNE1-210ENST00000416778 TMEM69Q5SWH9 247 aa13.55□□□□□ -0.24
CPNE1-210ENST00000416778 CD300LFQ8TDQ1 290 aa13.55□□□□□ -0.24
CPNE1-210ENST00000416778 TM2D3Q9BRN9 247 aa13.55□□□□□ -0.24
CPNE1-210ENST00000416778 PLEKHA2Q9HB19 425 aa13.55□□□□□ -0.24
CPNE1-210ENST00000416778 HRASLSQ9HDD0 168 aa13.55□□□□□ -0.24
CPNE1-210ENST00000416778 IFT46Q9NQC8 304 aa13.55□□□□□ -0.24
CPNE1-210ENST00000416778 EHFQ9NZC4 300 aa13.55□□□□□ -0.24
CPNE1-210ENST00000416778 DNAH7Q8WXX0 4024 aa13.55□□□□□ -0.24
CPNE1-210ENST00000416778 ZNF785A8K8V0 405 aa13.54□□□□□ -0.24
CPNE1-210ENST00000416778 C3orf84H3BNL1 204 aa13.54□□□□□ -0.24
CPNE1-210ENST00000416778 GGCTO75223 188 aaKnown RBP13.54□□□□□ -0.24
CPNE1-210ENST00000416778 HLA-AP01891 365 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms