RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 ICAM4Q14773 271 aa7.86□□□□□ -1.15
SNHG3-201ENST00000413987 SMIM21Q3B7S5 101 aa7.86□□□□□ -1.15
SNHG3-201ENST00000413987 SNAI3Q3KNW1 292 aa7.86□□□□□ -1.15
SNHG3-201ENST00000413987 SPSB3Q6PJ21 355 aa7.86□□□□□ -1.15
SNHG3-201ENST00000413987 ACY3Q96HD9 319 aa7.86□□□□□ -1.15
SNHG3-201ENST00000413987 S1PR3Q99500 378 aa7.86□□□□□ -1.15
SNHG3-201ENST00000413987 SNHG12Q9BXW3 62 aa7.86□□□□□ -1.15
SNHG3-201ENST00000413987 PTPRQQ9UMZ3 2332 aa7.86□□□□□ -1.15
SNHG3-201ENST00000413987 ZNHIT1O43257 154 aa7.86□□□□□ -1.15
SNHG3-201ENST00000413987 IGHMP01871 453 aa7.86□□□□□ -1.15
SNHG3-201ENST00000413987 CTLA4P16410 223 aa7.86□□□□□ -1.15
SNHG3-201ENST00000413987 S100GP29377 79 aa7.86□□□□□ -1.15
SNHG3-201ENST00000413987 RAB35Q15286 201 aa7.86□□□□□ -1.15
SNHG3-201ENST00000413987 MS4A18Q3C1V0 323 aa7.86□□□□□ -1.15
SNHG3-201ENST00000413987 GRINAQ7Z429 371 aa7.86□□□□□ -1.15
SNHG3-201ENST00000413987 CMTM1Q8IZ96 169 aa7.86□□□□□ -1.15
SNHG3-201ENST00000413987 CYB561D1Q8N8Q1 229 aa7.86□□□□□ -1.15
SNHG3-201ENST00000413987 LRTM2Q8N967 370 aa7.86□□□□□ -1.15
SNHG3-201ENST00000413987 GNPNAT1Q96EK6 184 aaPredicted RBP7.86□□□□□ -1.15
SNHG3-201ENST00000413987 ABHD14AQ9BUJ0 271 aa7.86□□□□□ -1.15
SNHG3-201ENST00000413987 OR10A2Q9H208 303 aa7.86□□□□□ -1.15
SNHG3-201ENST00000413987 GPR84Q9NQS5 396 aa7.86□□□□□ -1.15
SNHG3-201ENST00000413987 AK3Q9UIJ7 227 aa7.86□□□□□ -1.15
SNHG3-201ENST00000413987 VPREB3Q9UKI3 123 aa7.86□□□□□ -1.15
SNHG3-201ENST00000413987 ZNF407Q9C0G0 2248 aa7.85□□□□□ -1.15
SNHG3-201ENST00000413987 A0A1B0GV50 99 aa7.85□□□□□ -1.15
SNHG3-201ENST00000413987 FAM166BA8MTA8 275 aa7.85□□□□□ -1.15
SNHG3-201ENST00000413987 PPP5D1E7EU14 171 aa7.85□□□□□ -1.15
SNHG3-201ENST00000413987 K7EM74 188 aa7.85□□□□□ -1.15
SNHG3-201ENST00000413987 SDCBPO00560 298 aaPredicted RBP7.85□□□□□ -1.15
SNHG3-201ENST00000413987 HOXB4P17483 251 aaPredicted RBP7.85□□□□□ -1.15
SNHG3-201ENST00000413987 DUTP33316 252 aaKnown RBP7.85□□□□□ -1.15
SNHG3-201ENST00000413987 POLR2HP52434 150 aaKnown RBP7.85□□□□□ -1.15
SNHG3-201ENST00000413987 CCL20P78556 96 aa7.85□□□□□ -1.15
SNHG3-201ENST00000413987 TAL2Q16559 108 aa7.85□□□□□ -1.15
SNHG3-201ENST00000413987 SLC35G3Q8N808 338 aa7.85□□□□□ -1.15
SNHG3-201ENST00000413987 TMEM18Q96B42 140 aa7.85□□□□□ -1.15
SNHG3-201ENST00000413987 ADAT3Q96EY9 351 aaPredicted RBP7.85□□□□□ -1.15
SNHG3-201ENST00000413987 ARHGAP5-AS1Q96IT6 56 aa7.85□□□□□ -1.15
SNHG3-201ENST00000413987 CABLES2Q9BTV7 478 aa7.85□□□□□ -1.15
SNHG3-201ENST00000413987 TMEM208Q9BTX3 173 aa7.85□□□□□ -1.15
SNHG3-201ENST00000413987 TCF19Q9Y242 345 aa7.85□□□□□ -1.15
SNHG3-201ENST00000413987 ATRXP46100 2492 aa7.85□□□□□ -1.15
SNHG3-201ENST00000413987 OR6C6A6NF89 314 aa7.84□□□□□ -1.15
SNHG3-201ENST00000413987 PITX3O75364 302 aa7.84□□□□□ -1.15
SNHG3-201ENST00000413987 TRAPPC6AO75865 159 aa7.84□□□□□ -1.15
SNHG3-201ENST00000413987 WISP2O76076 250 aa7.84□□□□□ -1.15
SNHG3-201ENST00000413987 TYMSP04818 313 aa7.84□□□□□ -1.15
SNHG3-201ENST00000413987 IRF2P14316 349 aa7.84□□□□□ -1.15
SNHG3-201ENST00000413987 ARG2P78540 354 aa7.84□□□□□ -1.15
SNHG3-201ENST00000413987 CR1LQ2VPA4 569 aa7.84□□□□□ -1.15
SNHG3-201ENST00000413987 FFAR4Q5NUL3 377 aa7.84□□□□□ -1.15
SNHG3-201ENST00000413987 SP5Q6BEB4 398 aaPredicted RBP7.84□□□□□ -1.15
SNHG3-201ENST00000413987 OR4X1Q8NH49 305 aa7.84□□□□□ -1.15
SNHG3-201ENST00000413987 ZNF837Q96EG3 531 aaPredicted RBP7.84□□□□□ -1.15
SNHG3-201ENST00000413987 VPS25Q9BRG1 176 aa7.84□□□□□ -1.15
SNHG3-201ENST00000413987 MOB1AQ9H8S9 216 aa7.84□□□□□ -1.15
SNHG3-201ENST00000413987 FAM206AQ9NX38 181 aa7.84□□□□□ -1.15
SNHG3-201ENST00000413987 TLN1Q9Y490 2541 aaKnown RBP7.84□□□□□ -1.15
SNHG3-201ENST00000413987 KIR2DS1A0A191URI9 304 aa7.84□□□□□ -1.15
SNHG3-201ENST00000413987 A0A1B0GU03 582 aa7.84□□□□□ -1.15
SNHG3-201ENST00000413987 ZNF878C9JN71 531 aa7.84□□□□□ -1.15
SNHG3-201ENST00000413987 ZIC3O60481 467 aa7.84□□□□□ -1.15
SNHG3-201ENST00000413987 CA1P00915 261 aaPredicted RBP7.84□□□□□ -1.15
SNHG3-201ENST00000413987 TTRP02766 147 aa7.84□□□□□ -1.15
SNHG3-201ENST00000413987 OR10J4P0C629 311 aa7.84□□□□□ -1.15
SNHG3-201ENST00000413987 FAM87AP0C7U9 286 aa7.84□□□□□ -1.15
SNHG3-201ENST00000413987 ATP6V0CP27449 155 aa7.84□□□□□ -1.15
SNHG3-201ENST00000413987 APLNRP35414 380 aa7.84□□□□□ -1.15
SNHG3-201ENST00000413987 KIR2DS1Q14954 304 aa7.84□□□□□ -1.15
SNHG3-201ENST00000413987 OTPQ5XKR4 325 aa7.84□□□□□ -1.15
SNHG3-201ENST00000413987 FBXW12Q6X9E4 464 aa7.84□□□□□ -1.15
SNHG3-201ENST00000413987 COMMD2Q86X83 199 aa7.84□□□□□ -1.15
SNHG3-201ENST00000413987 TGIF2LYQ8IUE0 185 aa7.84□□□□□ -1.15
SNHG3-201ENST00000413987 SPACA3Q8IXA5 215 aa7.84□□□□□ -1.15
SNHG3-201ENST00000413987 ZFP62Q8NB50 900 aaPredicted RBP7.84□□□□□ -1.15
SNHG3-201ENST00000413987 MDS2Q8NDY4 140 aa7.84□□□□□ -1.15
SNHG3-201ENST00000413987 SLC26A10Q8NG04 563 aa7.84□□□□□ -1.15
SNHG3-201ENST00000413987 CLDND2Q8NHS1 167 aa7.84□□□□□ -1.15
SNHG3-201ENST00000413987 PBOV1Q9GZY1 135 aa7.84□□□□□ -1.15
SNHG3-201ENST00000413987 FAM234AQ9H0X4 552 aa7.84□□□□□ -1.15
SNHG3-201ENST00000413987 DNAJC13O75165 2243 aa7.83□□□□□ -1.16
SNHG3-201ENST00000413987 IGLV3-32A0A0A0MS00 114 aa7.83□□□□□ -1.16
SNHG3-201ENST00000413987 TRAV1-1A0A0B4J248 108 aa7.83□□□□□ -1.16
SNHG3-201ENST00000413987 ZNF732B4DXR9 585 aa7.83□□□□□ -1.16
SNHG3-201ENST00000413987 B5MCH6 92 aa7.83□□□□□ -1.16
SNHG3-201ENST00000413987 GEMIN2O14893 280 aaKnown RBP7.83□□□□□ -1.16
SNHG3-201ENST00000413987 HLA-DOBP13765 273 aa7.83□□□□□ -1.16
SNHG3-201ENST00000413987 SLC35B1P78383 322 aa7.83□□□□□ -1.16
SNHG3-201ENST00000413987 ZNF415Q09FC8 603 aa7.83□□□□□ -1.16
SNHG3-201ENST00000413987 TMEM187Q14656 261 aa7.83□□□□□ -1.16
SNHG3-201ENST00000413987 C1orf194Q5T5A4 169 aa7.83□□□□□ -1.16
SNHG3-201ENST00000413987 SLC25A47Q6Q0C1 308 aa7.83□□□□□ -1.16
SNHG3-201ENST00000413987 C8orf86Q6ZUL3 223 aa7.83□□□□□ -1.16
SNHG3-201ENST00000413987 UEVLDQ8IX04 471 aa7.83□□□□□ -1.16
SNHG3-201ENST00000413987 FBXL14Q8N1E6 418 aa7.83□□□□□ -1.16
SNHG3-201ENST00000413987 LINC01356Q8N9X3 169 aa7.83□□□□□ -1.16
SNHG3-201ENST00000413987 OR51T1Q8NGJ9 327 aa7.83□□□□□ -1.16
SNHG3-201ENST00000413987 OR1B1Q8NGR6 318 aa7.83□□□□□ -1.16
SNHG3-201ENST00000413987 C1orf147Q96MC9 270 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms