RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 OR52A1Q9UKL2 312 aa4.34□□□□□ -1.71
LINC00342-201ENST00000412393 IKZF2Q9UKS7 526 aa4.34□□□□□ -1.71
LINC00342-201ENST00000412393 PIGBOS1A0A0B4J2F0 54 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 IGHV2-70DA0A0C4DH43 119 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 C13orf42A0A1B0GVH6 325 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 A0A1W2PPH5 198 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 TMEM89A2RUT3 159 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 CRYM-AS1A6NIL9 109 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 LINC01548A6NM66 108 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 ANKRD30BLA7E2S9 258 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 SERPINE3A8MV23 424 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 ZNF732B4DXR9 585 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 ITGB1BP1O14713 200 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 HSD17B6O14756 317 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 PPP1R2P9O14990 202 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 CIDEAO60543 219 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 IFNA21P01568 189 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 GRPP07492 148 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 SNRNP70P08621 437 aaKnown RBP4.33□□□□□ -1.72
LINC00342-201ENST00000412393 SRP19P09132 144 aaKnown RBP4.33□□□□□ -1.72
LINC00342-201ENST00000412393 H2BFMP0C1H6 154 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 OR5AC1P0C628 307 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 AKR1C4P17516 323 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 CHATP28329 748 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 NPY4RP50391 375 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 ZNF121P58317 390 aaPredicted RBP4.33□□□□□ -1.72
LINC00342-201ENST00000412393 OR2B8PP59922 312 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 HOXA4Q00056 320 aaPredicted RBP4.33□□□□□ -1.72
LINC00342-201ENST00000412393 PAX2Q02962 417 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 MFGE8Q08431 387 aaPredicted RBP4.33□□□□□ -1.72
LINC00342-201ENST00000412393 MZT1Q08AG7 82 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 ATXN7L3Q14CW9 347 aaPredicted RBP4.33□□□□□ -1.72
LINC00342-201ENST00000412393 OR8B8Q15620 311 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 LRRC37A5PQ49AS3 106 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 MIDNQ504T8 468 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 KHDC3LQ587J8 217 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 KLF17Q5JT82 389 aaPredicted RBP4.33□□□□□ -1.72
LINC00342-201ENST00000412393 C9orf152Q5JTZ5 239 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 ZNF506Q5JVG8 444 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 WDR25Q64LD2 544 aaPredicted RBP4.33□□□□□ -1.72
LINC00342-201ENST00000412393 RUSC1-AS1Q66K80 236 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 BTNL3Q6UXE8 466 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 ZNF826PQ6ZT77 177 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 FAM57BQ71RH2 274 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.33□□□□□ -1.72
LINC00342-201ENST00000412393 PRR18Q8N4B5 295 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 SIGLECL1Q8N7X8 197 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 HSD17B11Q8NBQ5 300 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 OR13C3Q8NGS6 347 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 FAM216AQ8WUB2 273 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 SPSB4Q96A44 273 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 FGGYQ96C11 551 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 C10orf35Q96D05 121 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 RBMXL1Q96E39 390 aaKnown RBP4.33□□□□□ -1.72
LINC00342-201ENST00000412393 TVP23CQ96ET8 276 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 BSCL2Q96G97 398 aaPredicted RBP4.33□□□□□ -1.72
LINC00342-201ENST00000412393 REEP6Q96HR9 211 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 PGAM5Q96HS1 289 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 NDUFAF3Q9BU61 184 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 TM2D1Q9BX74 207 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 GAL3ST2Q9H3Q3 398 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 TMEM231Q9H6L2 316 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 TAS2R4Q9NYW5 299 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 CLN8Q9UBY8 286 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 FBXL17Q9UF56 701 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 HSF4Q9ULV5 492 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 SLC22A13Q9Y226 551 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 LRP12Q9Y561 859 aa4.33□□□□□ -1.72
LINC00342-201ENST00000412393 IGHV3OR16-10A0A075B7F0 116 aa4.32□□□□□ -1.72
LINC00342-201ENST00000412393 A0A087X0M5 115 aa4.32□□□□□ -1.72
LINC00342-201ENST00000412393 TRAV38-1A0A0B4J264 116 aa4.32□□□□□ -1.72
LINC00342-201ENST00000412393 TRAV40A0A0B4J280 105 aa4.32□□□□□ -1.72
LINC00342-201ENST00000412393 KIR2DS1A0A191URI9 304 aa4.32□□□□□ -1.72
LINC00342-201ENST00000412393 hCG_38984A0A1B0GV85 526 aa4.32□□□□□ -1.72
LINC00342-201ENST00000412393 A0A1B0GX30 115 aa4.32□□□□□ -1.72
LINC00342-201ENST00000412393 MEIS3P1A6NDR6 274 aa4.32□□□□□ -1.72
LINC00342-201ENST00000412393 RBFOX3A6NFN3 312 aa4.32□□□□□ -1.72
LINC00342-201ENST00000412393 OOEPA6NGQ2 149 aa4.32□□□□□ -1.72
LINC00342-201ENST00000412393 TRDCB7Z8K6 153 aa4.32□□□□□ -1.72
LINC00342-201ENST00000412393 H3BQ15 152 aa4.32□□□□□ -1.72
LINC00342-201ENST00000412393 ADAM20O43506 726 aa4.32□□□□□ -1.72
LINC00342-201ENST00000412393 ENSAO43768 121 aaKnown RBP4.32□□□□□ -1.72
LINC00342-201ENST00000412393 GGCTO75223 188 aaKnown RBP4.32□□□□□ -1.72
LINC00342-201ENST00000412393 IGLV3-1P01715 115 aa4.32□□□□□ -1.72
LINC00342-201ENST00000412393 SFTPBP07988 381 aa4.32□□□□□ -1.72
LINC00342-201ENST00000412393 HCKP08631 526 aa4.32□□□□□ -1.72
LINC00342-201ENST00000412393 METTL15P1P0C7V9 234 aa4.32□□□□□ -1.72
LINC00342-201ENST00000412393 PPIAL4GP0DN37 164 aa4.32□□□□□ -1.72
LINC00342-201ENST00000412393 IGHV4-38-2P0DP08 117 aa4.32□□□□□ -1.72
LINC00342-201ENST00000412393 EGR1P18146 543 aa4.32□□□□□ -1.72
LINC00342-201ENST00000412393 FGF7P21781 194 aa4.32□□□□□ -1.72
LINC00342-201ENST00000412393 RSU1Q15404 277 aa4.32□□□□□ -1.72
LINC00342-201ENST00000412393 PLAC9Q5JTB6 97 aa4.32□□□□□ -1.72
LINC00342-201ENST00000412393 SPSB3Q6PJ21 355 aa4.32□□□□□ -1.72
LINC00342-201ENST00000412393 ZNF841Q6ZN19 808 aa4.32□□□□□ -1.72
LINC00342-201ENST00000412393 SLC25A26Q70HW3 274 aa4.32□□□□□ -1.72
LINC00342-201ENST00000412393 WDR86Q86TI4 376 aa4.32□□□□□ -1.72
LINC00342-201ENST00000412393 SGPP2Q8IWX5 399 aa4.32□□□□□ -1.72
LINC00342-201ENST00000412393 GCSAMQ8N6F7 178 aa4.32□□□□□ -1.72
LINC00342-201ENST00000412393 GVQW1Q8N7I0 195 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms