RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 H7BYZ3 331 aa13.1□□□□□ -0.31
HOXD3-202ENST00000410016 M0R1B8 84 aa13.1□□□□□ -0.31
HOXD3-202ENST00000410016 MPDU1O75352 247 aa13.1□□□□□ -0.31
HOXD3-202ENST00000410016 FAM201AQ5SY85 155 aa13.1□□□□□ -0.31
HOXD3-202ENST00000410016 ABHD12Q8N2K0 398 aa13.1□□□□□ -0.31
HOXD3-202ENST00000410016 C1orf159Q96HA4 380 aa13.1□□□□□ -0.31
HOXD3-202ENST00000410016 ELOVL1Q9BW60 279 aa13.1□□□□□ -0.31
HOXD3-202ENST00000410016 NCOR1P1Q9H4R4 102 aa13.1□□□□□ -0.31
HOXD3-202ENST00000410016 HEYLQ9NQ87 328 aaPredicted RBP13.1□□□□□ -0.31
HOXD3-202ENST00000410016 TMEM140Q9NV12 185 aa13.1□□□□□ -0.31
HOXD3-202ENST00000410016 FAM215AQ9Y5M1 114 aa13.1□□□□□ -0.31
HOXD3-202ENST00000410016 IGLV3-9A0A075B6K5 115 aa13.1□□□□□ -0.31
HOXD3-202ENST00000410016 ITGB1BP1O14713 200 aa13.1□□□□□ -0.31
HOXD3-202ENST00000410016 GALR2O43603 387 aaPredicted RBP13.1□□□□□ -0.31
HOXD3-202ENST00000410016 SPRY3O43610 288 aa13.1□□□□□ -0.31
HOXD3-202ENST00000410016 VENTXO95231 258 aa13.1□□□□□ -0.31
HOXD3-202ENST00000410016 GYPAP02724 150 aa13.1□□□□□ -0.31
HOXD3-202ENST00000410016 GALR1P47211 349 aa13.1□□□□□ -0.31
HOXD3-202ENST00000410016 NUBP1P53384 320 aa13.1□□□□□ -0.31
HOXD3-202ENST00000410016 KLF3P57682 345 aaPredicted RBP13.1□□□□□ -0.31
HOXD3-202ENST00000410016 RPP30P78346 268 aaKnown RBP13.1□□□□□ -0.31
HOXD3-202ENST00000410016 CT45A1Q5HYN5 189 aa13.1□□□□□ -0.31
HOXD3-202ENST00000410016 IGF2-ASQ6U949 168 aa13.1□□□□□ -0.31
HOXD3-202ENST00000410016 TGIF2LYQ8IUE0 185 aa13.1□□□□□ -0.31
HOXD3-202ENST00000410016 CT45A3Q8NHU0 189 aa13.1□□□□□ -0.31
HOXD3-202ENST00000410016 ITLN1Q8WWA0 313 aa13.1□□□□□ -0.31
HOXD3-202ENST00000410016 LEAP2Q969E1 77 aa13.1□□□□□ -0.31
HOXD3-202ENST00000410016 CNOT1A5YKK6 2376 aaKnown RBP13.1□□□□□ -0.31
HOXD3-202ENST00000410016 SOX15O60248 233 aa13.09□□□□□ -0.31
HOXD3-202ENST00000410016 CRYAAP02489 173 aa13.09□□□□□ -0.31
HOXD3-202ENST00000410016 OPRK1P41145 380 aa13.09□□□□□ -0.31
HOXD3-202ENST00000410016 ZADH2Q8N4Q0 377 aa13.09□□□□□ -0.31
HOXD3-202ENST00000410016 ANAPC16Q96DE5 110 aa13.09□□□□□ -0.31
HOXD3-202ENST00000410016 MGST2Q99735 147 aa13.09□□□□□ -0.31
HOXD3-202ENST00000410016 MS4A5Q9H3V2 200 aa13.09□□□□□ -0.31
HOXD3-202ENST00000410016 PITPNC1Q9UKF7 332 aa13.09□□□□□ -0.31
HOXD3-202ENST00000410016 GATA4P43694 442 aa13.09□□□□□ -0.31
HOXD3-202ENST00000410016 ERVK-16P61578 105 aa13.09□□□□□ -0.31
HOXD3-202ENST00000410016 FAM222BQ8WU58 562 aa13.09□□□□□ -0.31
HOXD3-202ENST00000410016 PATZ1Q9HBE1 687 aaKnown RBP13.09□□□□□ -0.31
HOXD3-202ENST00000410016 GNB1P62873 340 aa13.08□□□□□ -0.32
HOXD3-202ENST00000410016 C3orf36Q3SXR2 165 aa13.08□□□□□ -0.32
HOXD3-202ENST00000410016 VHLLQ6RSH7 139 aa13.08□□□□□ -0.32
HOXD3-202ENST00000410016 IGFL3Q6UXB1 125 aa13.08□□□□□ -0.32
HOXD3-202ENST00000410016 GGTLC1Q9BX51 225 aa13.08□□□□□ -0.32
HOXD3-202ENST00000410016 GFOD1Q9NXC2 390 aa13.08□□□□□ -0.32
HOXD3-202ENST00000410016 TCF19Q9Y242 345 aa13.08□□□□□ -0.32
HOXD3-202ENST00000410016 LSM4Q9Y4Z0 139 aaKnown RBP13.08□□□□□ -0.32
HOXD3-202ENST00000410016 KBTBD11-OT1A0A1B0GTJ5 212 aa13.08□□□□□ -0.32
HOXD3-202ENST00000410016 PDE6DO43924 150 aa13.08□□□□□ -0.32
HOXD3-202ENST00000410016 HRASP01112 189 aa13.08□□□□□ -0.32
HOXD3-202ENST00000410016 FABP4P15090 132 aa13.08□□□□□ -0.32
HOXD3-202ENST00000410016 KIR2DS2P43631 304 aa13.08□□□□□ -0.32
HOXD3-202ENST00000410016 ATP5G3P48201 142 aa13.08□□□□□ -0.32
HOXD3-202ENST00000410016 DUX4L9Q6RFH8 374 aaPredicted RBP13.08□□□□□ -0.32
HOXD3-202ENST00000410016 C22orf34Q6ZV56 151 aa13.08□□□□□ -0.32
HOXD3-202ENST00000410016 OR5B12Q96R08 314 aa13.08□□□□□ -0.32
HOXD3-202ENST00000410016 PCGF1Q9BSM1 259 aa13.08□□□□□ -0.32
HOXD3-202ENST00000410016 DSCAMO60469 2012 aa13.07□□□□□ -0.32
HOXD3-202ENST00000410016 TRGV8A0A0C4DH27 118 aa13.07□□□□□ -0.32
HOXD3-202ENST00000410016 A0A1W2PPV4 95 aa13.07□□□□□ -0.32
HOXD3-202ENST00000410016 ZNF729A6NN14 1252 aaPredicted RBP13.07□□□□□ -0.32
HOXD3-202ENST00000410016 RAB7AP51149 207 aa13.07□□□□□ -0.32
HOXD3-202ENST00000410016 LINC01551Q86U37 167 aa13.07□□□□□ -0.32
HOXD3-202ENST00000410016 ZNF383Q8NA42 475 aa13.07□□□□□ -0.32
HOXD3-202ENST00000410016 OR4S2Q8NH73 311 aa13.07□□□□□ -0.32
HOXD3-202ENST00000410016 RHOVQ96L33 236 aa13.07□□□□□ -0.32
HOXD3-202ENST00000410016 HIST1H2BLQ99880 126 aa13.07□□□□□ -0.32
HOXD3-202ENST00000410016 GCM1Q9NP62 436 aa13.07□□□□□ -0.32
HOXD3-202ENST00000410016 TET2Q6N021 2002 aaPredicted RBP13.07□□□□□ -0.32
HOXD3-202ENST00000410016 SAA2-SAA4A0A096LPE2 208 aa13.07□□□□□ -0.32
HOXD3-202ENST00000410016 TRBV23-1A0A0A0MS06 115 aa13.07□□□□□ -0.32
HOXD3-202ENST00000410016 C15orf61A6NNL5 157 aa13.07□□□□□ -0.32
HOXD3-202ENST00000410016 TMPRSS2O15393 492 aa13.07□□□□□ -0.32
HOXD3-202ENST00000410016 GGCTO75223 188 aaKnown RBP13.07□□□□□ -0.32
HOXD3-202ENST00000410016 SAA2P0DJI9 122 aaPredicted RBP13.07□□□□□ -0.32
HOXD3-202ENST00000410016 HIST1H1BP16401 226 aaKnown RBP13.07□□□□□ -0.32
HOXD3-202ENST00000410016 UBE2G2P60604 165 aa13.07□□□□□ -0.32
HOXD3-202ENST00000410016 CLEC12BQ2HXU8 276 aa13.07□□□□□ -0.32
HOXD3-202ENST00000410016 MIC13Q5XKP0 118 aa13.07□□□□□ -0.32
HOXD3-202ENST00000410016 TCF23Q7RTU1 214 aa13.07□□□□□ -0.32
HOXD3-202ENST00000410016 SDSLQ96GA7 329 aa13.07□□□□□ -0.32
HOXD3-202ENST00000410016 PRDM13Q9H4Q3 707 aa13.07□□□□□ -0.32
HOXD3-202ENST00000410016 PPP5D1E7EU14 171 aa13.06□□□□□ -0.32
HOXD3-202ENST00000410016 NDUFB4O95168 129 aa13.06□□□□□ -0.32
HOXD3-202ENST00000410016 STAG3L2P0CL84 134 aa13.06□□□□□ -0.32
HOXD3-202ENST00000410016 STAG3L3P0CL85 134 aa13.06□□□□□ -0.32
HOXD3-202ENST00000410016 BMP5P22003 454 aa13.06□□□□□ -0.32
HOXD3-202ENST00000410016 DERL1Q9BUN8 251 aa13.06□□□□□ -0.32
HOXD3-202ENST00000410016 KCNIP2Q9NS61 270 aa13.06□□□□□ -0.32
HOXD3-202ENST00000410016 TMEM14BQ9NUH8 114 aa13.06□□□□□ -0.32
HOXD3-202ENST00000410016 PXMP4Q9Y6I8 212 aa13.06□□□□□ -0.32
HOXD3-202ENST00000410016 MGAQ8IWI9 3026 aa13.06□□□□□ -0.32
HOXD3-202ENST00000410016 SMG1Q96Q15 3661 aaKnown RBP13.06□□□□□ -0.32
HOXD3-202ENST00000410016 A0A1W2PPQ1 181 aa13.06□□□□□ -0.32
HOXD3-202ENST00000410016 ARSJQ5FYB0 599 aaPredicted RBP13.06□□□□□ -0.32
HOXD3-202ENST00000410016 COA6Q5JTJ3 125 aaKnown RBP13.06□□□□□ -0.32
HOXD3-202ENST00000410016 CST9LP1Q5W188 147 aa13.06□□□□□ -0.32
HOXD3-202ENST00000410016 STUMQ69YW2 141 aa13.06□□□□□ -0.32
HOXD3-202ENST00000410016 OR4A47Q6IF82 309 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms