RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 ARHGAP5-AS1Q96IT6 56 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 KCNS1Q96KK3 526 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 RAB40CQ96S21 281 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 CCDC3Q9BQI4 270 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 TXNDC17Q9BRA2 123 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 AICDAQ9GZX7 198 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 ZNF665Q9H7R5 613 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 ZNF286AQ9HBT8 521 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 SLC39A9Q9NUM3 307 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 TBL2Q9Y4P3 447 aaKnown RBP4.57□□□□□ -1.68
CLK1-202ENST00000409403 TIMM9Q9Y5J7 89 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 OR51B2Q9Y5P1 312 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 ACANP16112 2415 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 COL6A5A8TX70 2615 aa4.57□□□□□ -1.68
CLK1-202ENST00000409403 A0A0A6YYD4 124 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 IGLV1-36A0A0B4J1U3 117 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 MDFIC2A0A1B0GVS7 189 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 SERINC4A6NH21 518 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 FAM90A8PA6NJQ4 464 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 M0R1X1 148 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 P2RY10O00398 339 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 SOCS1O15524 211 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 MLNRO43193 412 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 SSSCA1O60232 199 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 IGHMP01871 453 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 OR10J4P0C629 311 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 FAM90A13PP0C7W8 464 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 FAM90A24PP0C7X0 464 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 SLC25A6P12236 298 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 S100GP29377 79 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 CD70P32970 193 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 NPBWR2P48146 333 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 EMDP50402 254 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 RPL27P61353 136 aaKnown RBP4.56□□□□□ -1.68
CLK1-202ENST00000409403 SSBP2P81877 361 aaPredicted RBP4.56□□□□□ -1.68
CLK1-202ENST00000409403 OR8B8Q15620 311 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 KRTCAP3Q53RY4 240 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 LCN15Q6UWW0 184 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 LYZL2Q7Z4W2 148 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 ZNF695Q8IW36 515 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 TSTD1Q8NFU3 115 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 OR10P1Q8NGE3 313 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 OR52M1Q8NGK5 317 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 OR4P4Q8NGL7 312 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 OR5P3Q8WZ94 311 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 OR1E3Q8WZA6 343 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 LHX4Q969G2 390 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 AMELYQ99218 206 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 GPER1Q99527 375 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 TM2D1Q9BX74 207 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 PECRQ9BY49 303 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 ANXA10Q9UJ72 324 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 RNF24Q9Y225 148 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 VDAC3Q9Y277 283 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 RNF115Q9Y4L5 304 aa4.56□□□□□ -1.68
CLK1-202ENST00000409403 FLNAP21333 2647 aaKnown RBP4.56□□□□□ -1.68
CLK1-202ENST00000409403 HEATR5AQ86XA9 2040 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 PKD1L1Q8TDX9 2849 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 IGKV1D-42A0A075B6H8 117 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 TRAV36DV7A0A075B6V5 113 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 TRAV9-2A0A087WT02 112 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 CTXND1A0A1B0GTU2 59 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 DPRXA6NFQ7 191 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 C17orf105B2RV13 164 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 G3V4G9 280 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 DEGS1O15121 323 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 PHF1O43189 567 aaPredicted RBP4.55□□□□□ -1.68
CLK1-202ENST00000409403 HCRTR1O43613 425 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 CD5LO43866 347 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 SLC16A7O60669 478 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 RAD51DO75771 328 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 GPR75O95800 540 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 NUDT14O95848 222 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 MT-CO2P00403 227 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 BGLAPP02818 100 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 GPX1P07203 203 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 PSG1P11464 419 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 BLVRBP30043 206 aaPredicted RBP4.55□□□□□ -1.68
CLK1-202ENST00000409403 S100A7P31151 101 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 CDKN1AP38936 164 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 GUCA1AP43080 201 aaPredicted RBP4.55□□□□□ -1.68
CLK1-202ENST00000409403 COMPP49747 757 aaPredicted RBP4.55□□□□□ -1.68
CLK1-202ENST00000409403 LHX2P50458 406 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 PRRX1P54821 245 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 TMEM50BP56557 158 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 SELENOVP59797 346 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 ZNF154Q13106 437 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 SGCBQ16585 318 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 FAM162BQ5T6X4 162 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 LRP11Q86VZ4 500 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 ZNF547Q8IVP9 402 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 DEFB125Q8N687 156 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 OR2A1Q8NGT9 310 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 FOXN4Q96NZ1 517 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 C1QTNF5Q9BXJ0 243 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 STRADBQ9C0K7 418 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 ST20Q9HBF5 79 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 PLSCR4Q9NRQ2 329 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 RPRMQ9NS64 109 aa4.55□□□□□ -1.68
CLK1-202ENST00000409403 POLR1DQ9Y2S0 133 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms