RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 ZIC4Q8N9L1 334 aa21.21■□□□□ 0.99
SPIRE1-202ENST00000409402 LINC00312Q9Y6C7 94 aa21.21■□□□□ 0.99
SPIRE1-202ENST00000409402 SIPA1L1O43166 1804 aa21.21■□□□□ 0.99
SPIRE1-202ENST00000409402 CD99P14209 185 aa21.21■□□□□ 0.99
SPIRE1-202ENST00000409402 OR1N2Q8NGR9 330 aa21.21■□□□□ 0.99
SPIRE1-202ENST00000409402 PSME4Q14997 1843 aa21.21■□□□□ 0.99
SPIRE1-202ENST00000409402 LINC00114Q6XXX2 140 aa21.2■□□□□ 0.99
SPIRE1-202ENST00000409402 CBLN2Q8IUK8 224 aa21.2■□□□□ 0.99
SPIRE1-202ENST00000409402 CD74P04233 296 aa21.2■□□□□ 0.98
SPIRE1-202ENST00000409402 BTF3P20290 206 aaKnown RBP21.2■□□□□ 0.98
SPIRE1-202ENST00000409402 PACRGQ96M98 296 aaPredicted RBP21.2■□□□□ 0.98
SPIRE1-202ENST00000409402 DEPPQ9NTK1 212 aa21.2■□□□□ 0.98
SPIRE1-202ENST00000409402 BET1LQ9NYM9 111 aa21.2■□□□□ 0.98
SPIRE1-202ENST00000409402 DLX6P56179 175 aa21.2■□□□□ 0.98
SPIRE1-202ENST00000409402 FLVCR1-AS1Q8TAF5 88 aa21.2■□□□□ 0.98
SPIRE1-202ENST00000409402 ARL14EPLP0DKL9 152 aa21.2■□□□□ 0.98
SPIRE1-202ENST00000409402 TM2D1Q9BX74 207 aa21.2■□□□□ 0.98
SPIRE1-202ENST00000409402 CXCL2P19875 107 aa21.2■□□□□ 0.98
SPIRE1-202ENST00000409402 PLAURQ03405 335 aa21.2■□□□□ 0.98
SPIRE1-202ENST00000409402 OR13A1Q8NGR1 328 aa21.2■□□□□ 0.98
SPIRE1-202ENST00000409402 FBXL7Q9UJT9 491 aa21.2■□□□□ 0.98
SPIRE1-202ENST00000409402 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP21.19■□□□□ 0.98
SPIRE1-202ENST00000409402 HIST1H1AQ02539 215 aaPredicted RBP21.19■□□□□ 0.98
SPIRE1-202ENST00000409402 ZNF837Q96EG3 531 aaPredicted RBP21.19■□□□□ 0.98
SPIRE1-202ENST00000409402 NABP2Q9BQ15 211 aa21.19■□□□□ 0.98
SPIRE1-202ENST00000409402 MOSP00540 346 aa21.19■□□□□ 0.98
SPIRE1-202ENST00000409402 SIGIRRQ6IA17 410 aa21.19■□□□□ 0.98
SPIRE1-202ENST00000409402 TET1Q8NFU7 2136 aa21.19■□□□□ 0.98
SPIRE1-202ENST00000409402 CA2P00918 260 aa21.19■□□□□ 0.98
SPIRE1-202ENST00000409402 HERPUD1Q15011 391 aa21.18■□□□□ 0.98
SPIRE1-202ENST00000409402 AHCTF1Q8WYP5 2266 aa21.18■□□□□ 0.98
SPIRE1-202ENST00000409402 ZNF324O75467 553 aaPredicted RBP21.18■□□□□ 0.98
SPIRE1-202ENST00000409402 TMEM177Q53S58 311 aa21.18■□□□□ 0.98
SPIRE1-202ENST00000409402 ARPC1AQ92747 370 aa21.18■□□□□ 0.98
SPIRE1-202ENST00000409402 AQP10Q96PS8 301 aa21.18■□□□□ 0.98
SPIRE1-202ENST00000409402 PATJQ8NI35 1801 aa21.18■□□□□ 0.98
SPIRE1-202ENST00000409402 IGHV3-48P01763 117 aa21.18■□□□□ 0.98
SPIRE1-202ENST00000409402 HSPB1P04792 205 aaKnown RBP21.18■□□□□ 0.98
SPIRE1-202ENST00000409402 THBDP07204 575 aa21.18■□□□□ 0.98
SPIRE1-202ENST00000409402 FAM3BP58499 235 aaPredicted RBP21.18■□□□□ 0.98
SPIRE1-202ENST00000409402 C1QL2Q7Z5L3 287 aa21.18■□□□□ 0.98
SPIRE1-202ENST00000409402 TRPM7Q96QT4 1865 aa21.18■□□□□ 0.98
SPIRE1-202ENST00000409402 IGLV3-32A0A0A0MS00 114 aa21.18■□□□□ 0.98
SPIRE1-202ENST00000409402 SPRR3Q9UBC9 169 aa21.18■□□□□ 0.98
SPIRE1-202ENST00000409402 IGHV3-23P01764 117 aa21.18■□□□□ 0.98
SPIRE1-202ENST00000409402 MT-ND6P03923 174 aa21.17■□□□□ 0.98
SPIRE1-202ENST00000409402 NCMAPQ5T1S8 102 aa21.17■□□□□ 0.98
SPIRE1-202ENST00000409402 SEMA5BQ9P283 1151 aa21.17■□□□□ 0.98
SPIRE1-202ENST00000409402 ZFP30Q9Y2G7 519 aa21.17■□□□□ 0.98
SPIRE1-202ENST00000409402 PRO1933Q9H354 126 aa21.17■□□□□ 0.98
SPIRE1-202ENST00000409402 PTBP3O95758 552 aaKnown RBP21.17■□□□□ 0.98
SPIRE1-202ENST00000409402 CD81P60033 236 aa21.17■□□□□ 0.98
SPIRE1-202ENST00000409402 FAM159AQ6UWV7 190 aa21.17■□□□□ 0.98
SPIRE1-202ENST00000409402 ARID1AO14497 2285 aa21.16■□□□□ 0.98
SPIRE1-202ENST00000409402 H3BTX0 84 aa21.16■□□□□ 0.98
SPIRE1-202ENST00000409402 TBX15Q96SF7 602 aa21.16■□□□□ 0.98
SPIRE1-202ENST00000409402 ZNF502Q8TBZ5 544 aa21.16■□□□□ 0.98
SPIRE1-202ENST00000409402 NPFFR1Q9GZQ6 430 aa21.16■□□□□ 0.98
SPIRE1-202ENST00000409402 IGKV3-20P01619 116 aa21.16■□□□□ 0.98
SPIRE1-202ENST00000409402 SPSB4Q96A44 273 aa21.16■□□□□ 0.98
SPIRE1-202ENST00000409402 TP53RKQ96S44 253 aa21.16■□□□□ 0.98
SPIRE1-202ENST00000409402 GCGP01275 180 aa21.15■□□□□ 0.98
SPIRE1-202ENST00000409402 CYP2G1PQ6ZSU1 146 aa21.15■□□□□ 0.98
SPIRE1-202ENST00000409402 GATAD1Q8WUU5 269 aa21.15■□□□□ 0.98
SPIRE1-202ENST00000409402 LINC00862A6NCI5 91 aa21.15■□□□□ 0.98
SPIRE1-202ENST00000409402 PGLYRP4Q96LB8 373 aa21.15■□□□□ 0.98
SPIRE1-202ENST00000409402 C1QL1O75973 258 aa21.15■□□□□ 0.98
SPIRE1-202ENST00000409402 IGHV3OR16-13A0A075B7E8 117 aa21.15■□□□□ 0.98
SPIRE1-202ENST00000409402 IGHV3-74A0A0B4J1X5 117 aa21.15■□□□□ 0.98
SPIRE1-202ENST00000409402 TRGC1P0CF51 173 aa21.15■□□□□ 0.98
SPIRE1-202ENST00000409402 LINC00305Q7Z4B0 112 aa21.15■□□□□ 0.98
SPIRE1-202ENST00000409402 SRSF12Q8WXF0 261 aaKnown RBP21.15■□□□□ 0.98
SPIRE1-202ENST00000409402 GPR82Q96P67 336 aa21.15■□□□□ 0.98
SPIRE1-202ENST00000409402 RALGAPA2Q2PPJ7 1873 aa21.14■□□□□ 0.98
SPIRE1-202ENST00000409402 A0A0G2JMZ2 1700 aa21.14■□□□□ 0.97
SPIRE1-202ENST00000409402 LRRC37A2A6NM11 1700 aa21.14■□□□□ 0.97
SPIRE1-202ENST00000409402 OR4C46A6NHA9 309 aa21.14■□□□□ 0.97
SPIRE1-202ENST00000409402 C2orf83Q53S99 150 aa21.14■□□□□ 0.97
SPIRE1-202ENST00000409402 MRPL20Q9BYC9 149 aaKnown RBP21.14■□□□□ 0.97
SPIRE1-202ENST00000409402 MOB4Q9Y3A3 225 aa21.14■□□□□ 0.97
SPIRE1-202ENST00000409402 OR4A47Q6IF82 309 aa21.13■□□□□ 0.97
SPIRE1-202ENST00000409402 IFI27L2Q9H2X8 130 aa21.13■□□□□ 0.97
SPIRE1-202ENST00000409402 PINLYPA6NC86 204 aa21.13■□□□□ 0.97
SPIRE1-202ENST00000409402 CLDND2Q8NHS1 167 aa21.13■□□□□ 0.97
SPIRE1-202ENST00000409402 ZNF56Q15929 161 aa21.13■□□□□ 0.97
SPIRE1-202ENST00000409402 COLCA1Q6ZS62 124 aa21.13■□□□□ 0.97
SPIRE1-202ENST00000409402 C21orf62Q9NYP8 219 aa21.13■□□□□ 0.97
SPIRE1-202ENST00000409402 PQLC2LA1A4F0 135 aa21.13■□□□□ 0.97
SPIRE1-202ENST00000409402 MAP1LC3AQ9H492 121 aa21.13■□□□□ 0.97
SPIRE1-202ENST00000409402 A0A0B4J293 547 aa21.13■□□□□ 0.97
SPIRE1-202ENST00000409402 IFITM10A6NMD0 228 aa21.13■□□□□ 0.97
SPIRE1-202ENST00000409402 CRYBB3P26998 211 aa21.13■□□□□ 0.97
SPIRE1-202ENST00000409402 GOLT1AQ6ZVE7 132 aa21.13■□□□□ 0.97
SPIRE1-202ENST00000409402 NUDT3O95989 172 aa21.12■□□□□ 0.97
SPIRE1-202ENST00000409402 IFITM3Q01628 133 aa21.12■□□□□ 0.97
SPIRE1-202ENST00000409402 METRNQ9UJH8 293 aa21.12■□□□□ 0.97
SPIRE1-202ENST00000409402 PEMTQ9UBM1 199 aa21.12■□□□□ 0.97
SPIRE1-202ENST00000409402 FOXI3A8MTJ6 420 aaPredicted RBP21.12■□□□□ 0.97
SPIRE1-202ENST00000409402 FOXA2Q9Y261 457 aaPredicted RBP21.12■□□□□ 0.97
SPIRE1-202ENST00000409402 A0A1W2PRX2 142 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms