RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 YPEL1O60688 119 aa13.67□□□□□ -0.22
COL23A1-202ENST00000407622 RELBQ01201 579 aa13.67□□□□□ -0.22
COL23A1-202ENST00000407622 ZNF474Q6S9Z5 364 aaPredicted RBP13.67□□□□□ -0.22
COL23A1-202ENST00000407622 TREML4Q6UXN2 200 aa13.67□□□□□ -0.22
COL23A1-202ENST00000407622 YPEL2Q96QA6 119 aa13.67□□□□□ -0.22
COL23A1-202ENST00000407622 PCGF1Q9BSM1 259 aa13.67□□□□□ -0.22
COL23A1-202ENST00000407622 DERL1Q9BUN8 251 aa13.67□□□□□ -0.22
COL23A1-202ENST00000407622 SRD5A3Q9H8P0 318 aa13.67□□□□□ -0.22
COL23A1-202ENST00000407622 DMRT1Q9Y5R6 373 aa13.67□□□□□ -0.22
COL23A1-202ENST00000407622 MAP1BP46821 2468 aaKnown RBP13.67□□□□□ -0.22
COL23A1-202ENST00000407622 PRSS46E5RG02 174 aa13.67□□□□□ -0.22
COL23A1-202ENST00000407622 SPCS3P61009 180 aa13.67□□□□□ -0.22
COL23A1-202ENST00000407622 ITLN1Q8WWA0 313 aa13.67□□□□□ -0.22
COL23A1-202ENST00000407622 MS4A5Q9H3V2 200 aa13.67□□□□□ -0.22
COL23A1-202ENST00000407622 HEYLQ9NQ87 328 aaPredicted RBP13.67□□□□□ -0.22
COL23A1-202ENST00000407622 TMEM140Q9NV12 185 aa13.67□□□□□ -0.22
COL23A1-202ENST00000407622 F2RL2O00254 374 aa13.66□□□□□ -0.22
COL23A1-202ENST00000407622 GNB1P62873 340 aa13.66□□□□□ -0.22
COL23A1-202ENST00000407622 CR1LQ2VPA4 569 aa13.66□□□□□ -0.22
COL23A1-202ENST00000407622 MGST2Q99735 147 aa13.66□□□□□ -0.22
COL23A1-202ENST00000407622 CALYQ9NYX4 217 aa13.66□□□□□ -0.22
COL23A1-202ENST00000407622 A0A1W2PPQ1 181 aa13.65□□□□□ -0.22
COL23A1-202ENST00000407622 MBD3L4A6NDZ8 208 aaPredicted RBP13.65□□□□□ -0.22
COL23A1-202ENST00000407622 MBD3L3A6NE82 208 aaPredicted RBP13.65□□□□□ -0.22
COL23A1-202ENST00000407622 MBD3L5A6NJ08 208 aaPredicted RBP13.65□□□□□ -0.22
COL23A1-202ENST00000407622 FOXC1Q12948 553 aa13.65□□□□□ -0.22
COL23A1-202ENST00000407622 C17orf58Q2M2W7 97 aa13.65□□□□□ -0.22
COL23A1-202ENST00000407622 MIC13Q5XKP0 118 aa13.65□□□□□ -0.22
COL23A1-202ENST00000407622 MBD3L2Q8NHZ7 208 aaPredicted RBP13.65□□□□□ -0.22
COL23A1-202ENST00000407622 C1orf159Q96HA4 380 aa13.65□□□□□ -0.22
COL23A1-202ENST00000407622 HIST1H2BLQ99880 126 aa13.65□□□□□ -0.22
COL23A1-202ENST00000407622 RAI1Q7Z5J4 1906 aaPredicted RBP13.65□□□□□ -0.22
COL23A1-202ENST00000407622 PGPEP1LA6NFU8 196 aa13.65□□□□□ -0.22
COL23A1-202ENST00000407622 TGOLN2O43493 480 aa13.65□□□□□ -0.22
COL23A1-202ENST00000407622 MZT1Q08AG7 82 aa13.65□□□□□ -0.22
COL23A1-202ENST00000407622 PRSS8Q16651 343 aa13.65□□□□□ -0.22
COL23A1-202ENST00000407622 DDB2Q92466 427 aa13.65□□□□□ -0.22
COL23A1-202ENST00000407622 SDSLQ96GA7 329 aa13.65□□□□□ -0.22
COL23A1-202ENST00000407622 S1PR3Q99500 378 aa13.65□□□□□ -0.22
COL23A1-202ENST00000407622 TMEM204Q9BSN7 226 aa13.65□□□□□ -0.22
COL23A1-202ENST00000407622 PRDM13Q9H4Q3 707 aa13.65□□□□□ -0.22
COL23A1-202ENST00000407622 TNCP24821 2201 aa13.64□□□□□ -0.23
COL23A1-202ENST00000407622 TANC2Q9HCD6 1990 aa13.64□□□□□ -0.23
COL23A1-202ENST00000407622 HRASP01112 189 aa13.64□□□□□ -0.23
COL23A1-202ENST00000407622 LHBP01229 141 aa13.64□□□□□ -0.23
COL23A1-202ENST00000407622 MYOD1P15172 320 aa13.64□□□□□ -0.23
COL23A1-202ENST00000407622 CFHR2P36980 270 aa13.64□□□□□ -0.23
COL23A1-202ENST00000407622 CT45A1Q5HYN5 189 aa13.64□□□□□ -0.23
COL23A1-202ENST00000407622 CST9LP1Q5W188 147 aa13.64□□□□□ -0.23
COL23A1-202ENST00000407622 C22orf34Q6ZV56 151 aa13.64□□□□□ -0.23
COL23A1-202ENST00000407622 CT45A3Q8NHU0 189 aa13.64□□□□□ -0.23
COL23A1-202ENST00000407622 GGTLC1Q9BX51 225 aa13.64□□□□□ -0.23
COL23A1-202ENST00000407622 FAM215AQ9Y5M1 114 aa13.64□□□□□ -0.23
COL23A1-202ENST00000407622 KLK10O43240 276 aa13.64□□□□□ -0.23
COL23A1-202ENST00000407622 CGB3P0DN86 165 aa13.64□□□□□ -0.23
COL23A1-202ENST00000407622 CGB7P0DN87 165 aa13.64□□□□□ -0.23
COL23A1-202ENST00000407622 CHRNA7P36544 502 aa13.64□□□□□ -0.23
COL23A1-202ENST00000407622 ERVK-16P61578 105 aa13.64□□□□□ -0.23
COL23A1-202ENST00000407622 ZNF114Q8NC26 417 aa13.64□□□□□ -0.23
COL23A1-202ENST00000407622 OR5B12Q96R08 314 aa13.64□□□□□ -0.23
COL23A1-202ENST00000407622 GFOD1Q9NXC2 390 aa13.64□□□□□ -0.23
COL23A1-202ENST00000407622 TCF19Q9Y242 345 aa13.64□□□□□ -0.23
COL23A1-202ENST00000407622 YLPM1P49750 1951 aaKnown RBP13.63□□□□□ -0.23
COL23A1-202ENST00000407622 SAA2-SAA4A0A096LPE2 208 aa13.63□□□□□ -0.23
COL23A1-202ENST00000407622 FAM90A9PA6NNJ1 464 aa13.63□□□□□ -0.23
COL23A1-202ENST00000407622 DLL1O00548 723 aa13.63□□□□□ -0.23
COL23A1-202ENST00000407622 NDUFB4O95168 129 aa13.63□□□□□ -0.23
COL23A1-202ENST00000407622 SAA2P0DJI9 122 aaPredicted RBP13.63□□□□□ -0.23
COL23A1-202ENST00000407622 ARL14EPLP0DKL9 152 aa13.63□□□□□ -0.23
COL23A1-202ENST00000407622 KLF3P57682 345 aaPredicted RBP13.63□□□□□ -0.23
COL23A1-202ENST00000407622 FAM169BQ8N8A8 192 aa13.63□□□□□ -0.23
COL23A1-202ENST00000407622 SSMEM1Q8WWF3 244 aa13.63□□□□□ -0.23
COL23A1-202ENST00000407622 PACRGQ96M98 296 aaPredicted RBP13.63□□□□□ -0.23
COL23A1-202ENST00000407622 SCNM1Q9BWG6 230 aa13.63□□□□□ -0.23
COL23A1-202ENST00000407622 PITPNC1Q9UKF7 332 aa13.63□□□□□ -0.23
COL23A1-202ENST00000407622 A0A1W2PPV4 95 aa13.63□□□□□ -0.23
COL23A1-202ENST00000407622 RBFOX2O43251 390 aaKnown RBP eCLIP13.63□□□□□ -0.23
COL23A1-202ENST00000407622 CEACAM4O75871 244 aa13.63□□□□□ -0.23
COL23A1-202ENST00000407622 GAMTQ14353 236 aa13.63□□□□□ -0.23
COL23A1-202ENST00000407622 LINC01551Q86U37 167 aa13.63□□□□□ -0.23
COL23A1-202ENST00000407622 TGIF2LYQ8IUE0 185 aa13.63□□□□□ -0.23
COL23A1-202ENST00000407622 PPP1R35Q8TAP8 253 aa13.63□□□□□ -0.23
COL23A1-202ENST00000407622 PXMP4Q9Y6I8 212 aa13.63□□□□□ -0.23
COL23A1-202ENST00000407622 PPP5D1E7EU14 171 aa13.62□□□□□ -0.23
COL23A1-202ENST00000407622 OPRK1P41145 380 aa13.62□□□□□ -0.23
COL23A1-202ENST00000407622 FAM3BP58499 235 aaPredicted RBP13.62□□□□□ -0.23
COL23A1-202ENST00000407622 TCF23Q7RTU1 214 aa13.62□□□□□ -0.23
COL23A1-202ENST00000407622 OR52E5Q8NH55 327 aa13.62□□□□□ -0.23
COL23A1-202ENST00000407622 RAB1CQ92928 201 aa13.62□□□□□ -0.23
COL23A1-202ENST00000407622 BSNQ9UPA5 3926 aa13.62□□□□□ -0.23
COL23A1-202ENST00000407622 C1QTNF9P0C862 333 aa13.62□□□□□ -0.23
COL23A1-202ENST00000407622 HIST1H1BP16401 226 aaKnown RBP13.62□□□□□ -0.23
COL23A1-202ENST00000407622 PDLIM3Q53GG5 364 aaPredicted RBP13.62□□□□□ -0.23
COL23A1-202ENST00000407622 ARSJQ5FYB0 599 aaPredicted RBP13.62□□□□□ -0.23
COL23A1-202ENST00000407622 TMEM183AQ8IXX5 376 aa13.62□□□□□ -0.23
COL23A1-202ENST00000407622 C1orf174Q8IYL3 243 aa13.62□□□□□ -0.23
COL23A1-202ENST00000407622 DEFB108BQ8NET1 73 aa13.62□□□□□ -0.23
COL23A1-202ENST00000407622 ROS1P08922 2347 aa13.61□□□□□ -0.23
COL23A1-202ENST00000407622 ATMQ13315 3056 aa13.61□□□□□ -0.23
COL23A1-202ENST00000407622 TRBV20OR9-2A0A075B6H5 130 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms