RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 IL11P20809 199 aa10.35□□□□□ -0.75
SMCR8-201ENST00000406438 MRPL32Q9BYC8 188 aaKnown RBP10.35□□□□□ -0.75
SMCR8-201ENST00000406438 TNCP24821 2201 aa10.35□□□□□ -0.75
SMCR8-201ENST00000406438 LINC00862A6NCI5 91 aa10.35□□□□□ -0.75
SMCR8-201ENST00000406438 CLDND2Q8NHS1 167 aa10.35□□□□□ -0.75
SMCR8-201ENST00000406438 KLHDC2Q9Y2U9 406 aa10.35□□□□□ -0.75
SMCR8-201ENST00000406438 F11RQ9Y624 299 aaKnown RBP10.35□□□□□ -0.75
SMCR8-201ENST00000406438 STAG3L3P0CL85 134 aa10.35□□□□□ -0.75
SMCR8-201ENST00000406438 MUC1P15941 1255 aaPredicted RBP10.35□□□□□ -0.75
SMCR8-201ENST00000406438 NANOS3P60323 173 aaKnown RBP10.35□□□□□ -0.75
SMCR8-201ENST00000406438 SLC22A18ASQ8N1D0 253 aa10.35□□□□□ -0.75
SMCR8-201ENST00000406438 ALX4Q9H161 411 aaPredicted RBP10.35□□□□□ -0.75
SMCR8-201ENST00000406438 FAM90A10PA6NDY2 464 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 FAM90A18PA6NE21 464 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 FAM90A16PA6NEW6 464 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 FAM90A20PA6NIJ5 464 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 FAM90A8PA6NJQ4 464 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 FAM90A7PA6NKC0 464 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 FAM90A22PA8MWA6 464 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 FAM90A12PA8MX19 464 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 FAM90A5PA8MXJ8 464 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 FAM90A23PA8MXZ1 464 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 PRSS23O95084 383 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 IGKV1D-16P01601 117 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 FAM90A15PP0C7V4 464 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 FAM90A13PP0C7W8 464 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 FAM90A14PP0C7W9 464 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 FAM90A24PP0C7X0 464 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 RUNX1Q01196 453 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 FOXS1O43638 330 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 CD1AP06126 327 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 C8orf88P0DMB2 117 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 SFRP2Q96HF1 295 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 PKIBQ9C010 78 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 BEX4Q9NWD9 120 aaPredicted RBP10.34□□□□□ -0.75
SMCR8-201ENST00000406438 JKAMPQ9P055 326 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 TNFRSF18Q9Y5U5 241 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 IGHV1-69-2A0A0G2JMI3 117 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 IL4P05112 153 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 AGAP20933 346 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 MIC13Q5XKP0 118 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 OR5AC2Q9NZP5 309 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 DTX4Q9Y2E6 619 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 NBASA2RRP1 2371 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 NPIPB11E5RHQ5 1161 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 FCARP24071 287 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 KLF14Q8TD94 323 aaPredicted RBP10.34□□□□□ -0.75
SMCR8-201ENST00000406438 HIST1H1AQ02539 215 aaPredicted RBP10.34□□□□□ -0.75
SMCR8-201ENST00000406438 TMEM186Q96B77 213 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 ZNF826PQ6ZT77 177 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 OR1P1Q8NH06 330 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 B9A039 149 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 MALP21145 153 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 RND2P52198 227 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 VKORC1L1Q8N0U8 176 aa10.34□□□□□ -0.75
SMCR8-201ENST00000406438 RBM38Q9H0Z9 239 aaKnown RBP10.34□□□□□ -0.75
SMCR8-201ENST00000406438 MRPL16Q9NX20 251 aaKnown RBP10.34□□□□□ -0.75
SMCR8-201ENST00000406438 PTP4A3O75365 173 aa10.33□□□□□ -0.76
SMCR8-201ENST00000406438 FOXC2Q99958 501 aa10.33□□□□□ -0.76
SMCR8-201ENST00000406438 MED12LQ86YW9 2145 aa10.33□□□□□ -0.76
SMCR8-201ENST00000406438 C7orf66A4D0T2 115 aa10.33□□□□□ -0.76
SMCR8-201ENST00000406438 CXorf65A6NEN9 183 aa10.33□□□□□ -0.76
SMCR8-201ENST00000406438 PGLYRP1O75594 196 aaPredicted RBP10.33□□□□□ -0.76
SMCR8-201ENST00000406438 TRGC2P03986 189 aa10.33□□□□□ -0.76
SMCR8-201ENST00000406438 CELA2AP08217 269 aa10.33□□□□□ -0.76
SMCR8-201ENST00000406438 ELOVL5Q9NYP7 299 aa10.33□□□□□ -0.76
SMCR8-201ENST00000406438 SOX21Q9Y651 276 aaPredicted RBP10.33□□□□□ -0.76
SMCR8-201ENST00000406438 NRXN2Q9P2S2 1712 aa10.33□□□□□ -0.76
SMCR8-201ENST00000406438 MTURNQ8N3F0 131 aa10.33□□□□□ -0.76
SMCR8-201ENST00000406438 TMEM250H0YL14 139 aa10.33□□□□□ -0.76
SMCR8-201ENST00000406438 FXYD3Q14802 87 aa10.33□□□□□ -0.76
SMCR8-201ENST00000406438 TMEM91Q6ZNR0 172 aa10.33□□□□□ -0.76
SMCR8-201ENST00000406438 MRPS18AQ9NVS2 196 aaKnown RBP10.33□□□□□ -0.76
SMCR8-201ENST00000406438 TRBV20OR9-2A0A075B6H5 130 aa10.33□□□□□ -0.76
SMCR8-201ENST00000406438 A0A1W2PQF6 199 aa10.33□□□□□ -0.76
SMCR8-201ENST00000406438 SLC25A20O43772 301 aa10.33□□□□□ -0.76
SMCR8-201ENST00000406438 HSPE1P61604 102 aaKnown RBP10.33□□□□□ -0.76
SMCR8-201ENST00000406438 SLC25A34Q6PIV7 304 aa10.33□□□□□ -0.76
SMCR8-201ENST00000406438 LINC00305Q7Z4B0 112 aa10.33□□□□□ -0.76
SMCR8-201ENST00000406438 C10orf126Q8N4M7 172 aa10.33□□□□□ -0.76
SMCR8-201ENST00000406438 OR9G1Q8NH87 305 aa10.33□□□□□ -0.76
SMCR8-201ENST00000406438 NKX2-8O15522 239 aa10.32□□□□□ -0.76
SMCR8-201ENST00000406438 UNC119Q13432 240 aa10.32□□□□□ -0.76
SMCR8-201ENST00000406438 TMEM160Q9NX00 188 aa10.32□□□□□ -0.76
SMCR8-201ENST00000406438 CEP192Q8TEP8 1941 aa10.32□□□□□ -0.76
SMCR8-201ENST00000406438 GFRA3O60609 400 aa10.32□□□□□ -0.76
SMCR8-201ENST00000406438 SAMD13Q5VXD3 122 aa10.32□□□□□ -0.76
SMCR8-201ENST00000406438 GOLT1AQ6ZVE7 132 aa10.32□□□□□ -0.76
SMCR8-201ENST00000406438 C10orf111Q8N326 155 aa10.32□□□□□ -0.76
SMCR8-201ENST00000406438 A0A0G2JLM5 398 aa10.32□□□□□ -0.76
SMCR8-201ENST00000406438 RPS11P62280 158 aaKnown RBP eCLIP10.32□□□□□ -0.76
SMCR8-201ENST00000406438 RIPPLY2Q5TAB7 128 aa10.32□□□□□ -0.76
SMCR8-201ENST00000406438 DLL3Q9NYJ7 618 aa10.32□□□□□ -0.76
SMCR8-201ENST00000406438 SMIM13P0DJ93 91 aa10.32□□□□□ -0.76
SMCR8-201ENST00000406438 SAPCD1Q5SSQ6 148 aa10.32□□□□□ -0.76
SMCR8-201ENST00000406438 TMEM170BQ5T4T1 132 aa10.32□□□□□ -0.76
SMCR8-201ENST00000406438 AQP3Q92482 292 aa10.32□□□□□ -0.76
SMCR8-201ENST00000406438 FOXD3Q9UJU5 478 aaPredicted RBP10.32□□□□□ -0.76
SMCR8-201ENST00000406438 F12P00748 615 aaPredicted RBP10.32□□□□□ -0.76
SMCR8-201ENST00000406438 JPT1Q9UK76 154 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms