RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 OR51M1Q9H341 326 aa15.41■□□□□ 0.06
COL18A1-204ENST00000400337 LYRM7Q5U5X0 104 aa15.4■□□□□ 0.06
COL18A1-204ENST00000400337 EBLN2Q6P2I7 272 aa15.4■□□□□ 0.06
COL18A1-204ENST00000400337 MSGN1A6NI15 193 aa15.4■□□□□ 0.06
COL18A1-204ENST00000400337 BSPH1Q075Z2 132 aa15.4■□□□□ 0.06
COL18A1-204ENST00000400337 FXYD3Q14802 87 aa15.4■□□□□ 0.06
COL18A1-204ENST00000400337 SNRNP200O75643 2136 aaKnown RBP15.4■□□□□ 0.06
COL18A1-204ENST00000400337 ZFP36L1Q07352 338 aaKnown RBP15.4■□□□□ 0.06
COL18A1-204ENST00000400337 ABLIM2Q6H8Q1 611 aa15.4■□□□□ 0.06
COL18A1-204ENST00000400337 ZNF841Q6ZN19 808 aa15.4■□□□□ 0.06
COL18A1-204ENST00000400337 FAM57AQ8TBR7 257 aa15.4■□□□□ 0.06
COL18A1-204ENST00000400337 SGK494Q96LW2 274 aa15.4■□□□□ 0.06
COL18A1-204ENST00000400337 DCTN5Q9BTE1 182 aa15.4■□□□□ 0.06
COL18A1-204ENST00000400337 TMEM56-RWDD3S4R434 201 aa15.4■□□□□ 0.06
COL18A1-204ENST00000400337 PRR32B1ATL7 298 aa15.4■□□□□ 0.06
COL18A1-204ENST00000400337 C2orf68Q2NKX9 166 aa15.4■□□□□ 0.06
COL18A1-204ENST00000400337 M0QZK8 103 aa15.39■□□□□ 0.05
COL18A1-204ENST00000400337 GGCTO75223 188 aaKnown RBP15.39■□□□□ 0.05
COL18A1-204ENST00000400337 PSMB2P49721 201 aa15.39■□□□□ 0.05
COL18A1-204ENST00000400337 STPG3Q8N7X2 389 aa15.39■□□□□ 0.05
COL18A1-204ENST00000400337 RTBDNQ9BSG5 229 aaPredicted RBP15.39■□□□□ 0.05
COL18A1-204ENST00000400337 NPIPB7O75200 414 aa15.39■□□□□ 0.05
COL18A1-204ENST00000400337 CD81P60033 236 aa15.39■□□□□ 0.05
COL18A1-204ENST00000400337 RNFT1Q5M7Z0 435 aa15.39■□□□□ 0.05
COL18A1-204ENST00000400337 MT-ND6P03923 174 aa15.39■□□□□ 0.05
COL18A1-204ENST00000400337 TRAV30A0A087WSZ9 112 aa15.39■□□□□ 0.05
COL18A1-204ENST00000400337 TGIF2-C20orf24A0A0A6YYL0 155 aa15.39■□□□□ 0.05
COL18A1-204ENST00000400337 IGHV3-35A0A0C4DH35 117 aa15.39■□□□□ 0.05
COL18A1-204ENST00000400337 CA2P00918 260 aa15.39■□□□□ 0.05
COL18A1-204ENST00000400337 NCOR1O75376 2440 aa15.39■□□□□ 0.05
COL18A1-204ENST00000400337 IFITM10A6NMD0 228 aa15.38■□□□□ 0.05
COL18A1-204ENST00000400337 SPSB4Q96A44 273 aa15.38■□□□□ 0.05
COL18A1-204ENST00000400337 FOXD3Q9UJU5 478 aaPredicted RBP15.38■□□□□ 0.05
COL18A1-204ENST00000400337 KLF7O75840 302 aaPredicted RBP15.38■□□□□ 0.05
COL18A1-204ENST00000400337 C17orf98A8MV24 154 aa15.38■□□□□ 0.05
COL18A1-204ENST00000400337 MAS1LP35410 378 aa15.38■□□□□ 0.05
COL18A1-204ENST00000400337 PDLIM4P50479 330 aa15.38■□□□□ 0.05
COL18A1-204ENST00000400337 GALNT14Q96FL9 552 aa15.38■□□□□ 0.05
COL18A1-204ENST00000400337 NPIPB11E5RHQ5 1161 aa15.38■□□□□ 0.05
COL18A1-204ENST00000400337 CD99P14209 185 aa15.38■□□□□ 0.05
COL18A1-204ENST00000400337 SMUG1Q53HV7 270 aa15.38■□□□□ 0.05
COL18A1-204ENST00000400337 SS18L1O75177 396 aaPredicted RBP15.38■□□□□ 0.05
COL18A1-204ENST00000400337 MOSP00540 346 aa15.38■□□□□ 0.05
COL18A1-204ENST00000400337 TMEM177Q53S58 311 aa15.38■□□□□ 0.05
COL18A1-204ENST00000400337 WBP1Q96G27 269 aa15.38■□□□□ 0.05
COL18A1-204ENST00000400337 HSPB9Q9BQS6 159 aa15.38■□□□□ 0.05
COL18A1-204ENST00000400337 DOCK6Q96HP0 2047 aa15.37■□□□□ 0.05
COL18A1-204ENST00000400337 IGLV3-32A0A0A0MS00 114 aa15.37■□□□□ 0.05
COL18A1-204ENST00000400337 UCP1P25874 307 aa15.37■□□□□ 0.05
COL18A1-204ENST00000400337 SRSF9Q13242 221 aaKnown RBP eCLIP15.37■□□□□ 0.056e-7■■□□□ 12.1
COL18A1-204ENST00000400337 C1QTNF12Q5T7M4 302 aa15.37■□□□□ 0.05
COL18A1-204ENST00000400337 PARLQ9H300 379 aa15.37■□□□□ 0.05
COL18A1-204ENST00000400337 MPTX1A8MV57 137 aa15.37■□□□□ 0.05
COL18A1-204ENST00000400337 RPL24P83731 157 aaKnown RBP15.37■□□□□ 0.05
COL18A1-204ENST00000400337 RPRMQ9NS64 109 aa15.37■□□□□ 0.05
COL18A1-204ENST00000400337 AUP1Q9Y679 476 aa15.37■□□□□ 0.05
COL18A1-204ENST00000400337 ZNF646O15015 1829 aaPredicted RBP15.37■□□□□ 0.05
COL18A1-204ENST00000400337 PQLC2LA1A4F0 135 aa15.37■□□□□ 0.05
COL18A1-204ENST00000400337 C5orf52A6NGY3 159 aa15.37■□□□□ 0.05
COL18A1-204ENST00000400337 TCTAP57738 103 aa15.37■□□□□ 0.05
COL18A1-204ENST00000400337 PGLYRP4Q96LB8 373 aa15.37■□□□□ 0.05
COL18A1-204ENST00000400337 RRHO14718 337 aa15.37■□□□□ 0.05
COL18A1-204ENST00000400337 AGAP20933 346 aa15.37■□□□□ 0.05
COL18A1-204ENST00000400337 A0A0G2JMZ2 1700 aa15.36■□□□□ 0.05
COL18A1-204ENST00000400337 LRRC37A2A6NM11 1700 aa15.36■□□□□ 0.05
COL18A1-204ENST00000400337 RELBQ01201 579 aa15.36■□□□□ 0.05
COL18A1-204ENST00000400337 CCL19Q99731 98 aa15.36■□□□□ 0.05
COL18A1-204ENST00000400337 PLSCR2Q9NRY7 297 aa15.36■□□□□ 0.05
COL18A1-204ENST00000400337 IQCF6A8MYZ5 107 aa15.36■□□□□ 0.05
COL18A1-204ENST00000400337 EGR1P18146 543 aa15.36■□□□□ 0.05
COL18A1-204ENST00000400337 ATP5G2Q06055 141 aa15.36■□□□□ 0.05
COL18A1-204ENST00000400337 LBHQ53QV2 105 aaPredicted RBP15.36■□□□□ 0.05
COL18A1-204ENST00000400337 PSMG3Q9BT73 122 aaPredicted RBP15.36■□□□□ 0.05
COL18A1-204ENST00000400337 DOCK4Q8N1I0 1966 aa15.36■□□□□ 0.05
COL18A1-204ENST00000400337 IGKV1-9A0A0C4DH69 117 aa15.36■□□□□ 0.05
COL18A1-204ENST00000400337 FOXH1O75593 365 aa15.36■□□□□ 0.05
COL18A1-204ENST00000400337 TEX29Q8N6K0 151 aa15.36■□□□□ 0.05
COL18A1-204ENST00000400337 A0A0B4J293 547 aa15.35■□□□□ 0.05
COL18A1-204ENST00000400337 CIDEAO60543 219 aa15.35■□□□□ 0.05
COL18A1-204ENST00000400337 CKS2P33552 79 aa15.35■□□□□ 0.05
COL18A1-204ENST00000400337 LYZL4Q96KX0 146 aa15.35■□□□□ 0.05
COL18A1-204ENST00000400337 SCN5AQ14524 2016 aa15.35■□□□□ 0.05
COL18A1-204ENST00000400337 PINLYPA6NC86 204 aa15.35■□□□□ 0.05
COL18A1-204ENST00000400337 RPLP1P05386 114 aaKnown RBP15.35■□□□□ 0.05
COL18A1-204ENST00000400337 C19orf24Q9BVV8 132 aa15.35■□□□□ 0.05
COL18A1-204ENST00000400337 A6NDN8 102 aa15.35■□□□□ 0.05
COL18A1-204ENST00000400337 HLA-DQA1P01909 254 aa15.35■□□□□ 0.05
COL18A1-204ENST00000400337 MST1P26927 711 aa15.35■□□□□ 0.05
COL18A1-204ENST00000400337 KBTBD11-OT1A0A1B0GTJ5 212 aa15.35■□□□□ 0.05
COL18A1-204ENST00000400337 IL4P05112 153 aa15.35■□□□□ 0.05
COL18A1-204ENST00000400337 DLX1P56177 255 aa15.35■□□□□ 0.05
COL18A1-204ENST00000400337 ZNF319Q9P2F9 582 aa15.35■□□□□ 0.05
COL18A1-204ENST00000400337 NTN3O00634 580 aaPredicted RBP15.34■□□□□ 0.05
COL18A1-204ENST00000400337 ZNF25P17030 456 aaPredicted RBP15.34■□□□□ 0.05
COL18A1-204ENST00000400337 NAT1P18440 290 aa15.34■□□□□ 0.05
COL18A1-204ENST00000400337 GCHFRP30047 84 aa15.34■□□□□ 0.05
COL18A1-204ENST00000400337 FAM106AQ4KMX7 169 aa15.34■□□□□ 0.05
COL18A1-204ENST00000400337 OR4B1Q8NGF8 309 aa15.34■□□□□ 0.05
COL18A1-204ENST00000400337 MRPL18Q9H0U6 180 aaKnown RBP15.34■□□□□ 0.05
COL18A1-204ENST00000400337 ZMAT5Q9UDW3 170 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms