RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 OR8A1Q8NGG7 326 aa12.39□□□□□ -0.43
RPRD1A-202ENST00000399022 LSM10Q969L4 123 aaKnown RBP12.39□□□□□ -0.43
RPRD1A-202ENST00000399022 SIGLEC12Q96PQ1 595 aa12.39□□□□□ -0.43
RPRD1A-202ENST00000399022 NPY1RP25929 384 aa12.39□□□□□ -0.43
RPRD1A-202ENST00000399022 TFF3Q07654 80 aa12.39□□□□□ -0.43
RPRD1A-202ENST00000399022 LYG1Q8N1E2 194 aa12.39□□□□□ -0.43
RPRD1A-202ENST00000399022 BMPERQ8N8U9 685 aa12.39□□□□□ -0.43
RPRD1A-202ENST00000399022 NPVFQ9HCQ7 196 aa12.39□□□□□ -0.43
RPRD1A-202ENST00000399022 A0A1B0GWJ7 208 aa12.39□□□□□ -0.43
RPRD1A-202ENST00000399022 CSN1S1P47710 185 aa12.39□□□□□ -0.43
RPRD1A-202ENST00000399022 HGFACQ04756 655 aa12.39□□□□□ -0.43
RPRD1A-202ENST00000399022 MBD3L1Q8WWY6 194 aa12.39□□□□□ -0.43
RPRD1A-202ENST00000399022 HES4Q9HCC6 221 aa12.39□□□□□ -0.43
RPRD1A-202ENST00000399022 IL36BQ9NZH7 164 aa12.39□□□□□ -0.43
RPRD1A-202ENST00000399022 LRRC30A6NM36 301 aa12.38□□□□□ -0.43
RPRD1A-202ENST00000399022 AESQ08117 197 aa12.38□□□□□ -0.43
RPRD1A-202ENST00000399022 CEACAM21Q3KPI0 293 aa12.38□□□□□ -0.43
RPRD1A-202ENST00000399022 Q5PR19 223 aa12.38□□□□□ -0.43
RPRD1A-202ENST00000399022 RIPPLY2Q5TAB7 128 aa12.38□□□□□ -0.43
RPRD1A-202ENST00000399022 SCO2A0A1W2PP80 73 aa12.38□□□□□ -0.43
RPRD1A-202ENST00000399022 NKX6-3A6NJ46 265 aa12.38□□□□□ -0.43
RPRD1A-202ENST00000399022 FAM90A26D6RGX4 464 aa12.38□□□□□ -0.43
RPRD1A-202ENST00000399022 NKX2-8O15522 239 aa12.38□□□□□ -0.43
RPRD1A-202ENST00000399022 CA2P00918 260 aa12.38□□□□□ -0.43
RPRD1A-202ENST00000399022 TMEM54Q969K7 222 aa12.38□□□□□ -0.43
RPRD1A-202ENST00000399022 POLR3KQ9Y2Y1 108 aaPredicted RBP12.38□□□□□ -0.43
RPRD1A-202ENST00000399022 A0A1B0GUS0 222 aa12.38□□□□□ -0.43
RPRD1A-202ENST00000399022 RND2P52198 227 aa12.38□□□□□ -0.43
RPRD1A-202ENST00000399022 NPCDR1Q9BY65 106 aa12.38□□□□□ -0.43
RPRD1A-202ENST00000399022 C5orf63A6NC05 138 aa12.38□□□□□ -0.43
RPRD1A-202ENST00000399022 ZNF826PQ6ZT77 177 aa12.38□□□□□ -0.43
RPRD1A-202ENST00000399022 FADS6Q8N9I5 356 aa12.38□□□□□ -0.43
RPRD1A-202ENST00000399022 HAND1O96004 215 aa12.37□□□□□ -0.43
RPRD1A-202ENST00000399022 OPRK1P41145 380 aa12.37□□□□□ -0.43
RPRD1A-202ENST00000399022 OR52L2PQ8NGH6 319 aa12.37□□□□□ -0.43
RPRD1A-202ENST00000399022 NGBQ9NPG2 151 aa12.37□□□□□ -0.43
RPRD1A-202ENST00000399022 HSPB8Q9UJY1 196 aa12.37□□□□□ -0.43
RPRD1A-202ENST00000399022 MPDU1O75352 247 aa12.37□□□□□ -0.43
RPRD1A-202ENST00000399022 P01737 135 aa12.37□□□□□ -0.43
RPRD1A-202ENST00000399022 AMY1AP04745 511 aa12.37□□□□□ -0.43
RPRD1A-202ENST00000399022 HIST1H1EP10412 219 aaKnown RBP12.37□□□□□ -0.43
RPRD1A-202ENST00000399022 DEFA4P12838 97 aa12.37□□□□□ -0.43
RPRD1A-202ENST00000399022 ORM2P19652 201 aa12.37□□□□□ -0.43
RPRD1A-202ENST00000399022 RBPJQ06330 500 aa12.37□□□□□ -0.43
RPRD1A-202ENST00000399022 ZBTB34Q8NCN2 500 aa12.37□□□□□ -0.43
RPRD1A-202ENST00000399022 DLL3Q9NYJ7 618 aa12.37□□□□□ -0.43
RPRD1A-202ENST00000399022 SHANK1Q9Y566 2161 aa12.37□□□□□ -0.43
RPRD1A-202ENST00000399022 TICRRQ7Z2Z1 1910 aa12.37□□□□□ -0.43
RPRD1A-202ENST00000399022 TRBV9A0A0B4J1U6 114 aa12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 SNAI2O43623 268 aa12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 BTF3P20290 206 aaKnown RBP12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 GNB2P62879 340 aa12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 OR1L4Q8NGR5 311 aa12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 SPSB4Q96A44 273 aa12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 PLSCR2Q9NRY7 297 aa12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 TIMM9Q9Y5J7 89 aa12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 TRAV1-1A0A0B4J248 108 aa12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 CEBPDP49716 269 aaPredicted RBP12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 FOXA3P55318 350 aaPredicted RBP12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 CENPWQ5EE01 88 aa12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 RNASEH2CQ8TDP1 164 aaKnown RBP12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 ZDHHC16Q969W1 377 aa12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 PPIAL4AQ9Y536 164 aa12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 CIDEAO60543 219 aa12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 COL8A1P27658 744 aa12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 DRAM1Q8N682 238 aa12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 LYZL4Q96KX0 146 aa12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 FAM90A10PA6NDY2 464 aa12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 FAM90A18PA6NE21 464 aa12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 FAM90A16PA6NEW6 464 aa12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 FAM90A20PA6NIJ5 464 aa12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 FAM90A8PA6NJQ4 464 aa12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 FAM90A7PA6NKC0 464 aa12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 FAM90A22PA8MWA6 464 aa12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 FAM90A12PA8MX19 464 aa12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 FAM90A5PA8MXJ8 464 aa12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 FAM90A23PA8MXZ1 464 aa12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 KLF7O75840 302 aaPredicted RBP12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 FAM90A15PP0C7V4 464 aa12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 FAM90A13PP0C7W8 464 aa12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 FAM90A14PP0C7W9 464 aa12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 FAM90A24PP0C7X0 464 aa12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 ARL16Q0P5N6 197 aa12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 SLC25A53Q5H9E4 307 aa12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 ZNF324BQ6AW86 544 aaPredicted RBP12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 RPP25LQ8N5L8 163 aaKnown RBP12.36□□□□□ -0.43
RPRD1A-202ENST00000399022 OOEPA6NGQ2 149 aa12.35□□□□□ -0.43
RPRD1A-202ENST00000399022 MAS1LP35410 378 aa12.35□□□□□ -0.43
RPRD1A-202ENST00000399022 CEACAM18A8MTB9 384 aa12.35□□□□□ -0.43
RPRD1A-202ENST00000399022 CRYABP02511 175 aaKnown RBP12.35□□□□□ -0.43
RPRD1A-202ENST00000399022 NMUP48645 174 aa12.35□□□□□ -0.43
RPRD1A-202ENST00000399022 RELBQ01201 579 aa12.35□□□□□ -0.43
RPRD1A-202ENST00000399022 PEF1Q9UBV8 284 aaKnown RBP12.35□□□□□ -0.43
RPRD1A-202ENST00000399022 SELENOKQ9Y6D0 94 aa12.35□□□□□ -0.43
RPRD1A-202ENST00000399022 LRRK1Q38SD2 2015 aa12.35□□□□□ -0.43
RPRD1A-202ENST00000399022 OR4C46A6NHA9 309 aa12.35□□□□□ -0.43
RPRD1A-202ENST00000399022 CORTO00230 105 aa12.35□□□□□ -0.43
RPRD1A-202ENST00000399022 SYNGR3O43761 229 aa12.35□□□□□ -0.43
RPRD1A-202ENST00000399022 OR10X1Q8NGY0 326 aa12.35□□□□□ -0.43
RPRD1A-202ENST00000399022 OR4S2Q8NH73 311 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms