RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 SP9P0CG40 484 aa7.12□□□□□ -1.27
SPTLC3-201ENST00000399002 UCP1P25874 307 aa7.12□□□□□ -1.27
SPTLC3-201ENST00000399002 EGR4Q05215 589 aa7.12□□□□□ -1.27
SPTLC3-201ENST00000399002 SRSF12Q8WXF0 261 aaKnown RBP7.12□□□□□ -1.27
SPTLC3-201ENST00000399002 IGLV3-32A0A0A0MS00 114 aa7.11□□□□□ -1.27
SPTLC3-201ENST00000399002 ZNF205O95201 554 aa7.11□□□□□ -1.27
SPTLC3-201ENST00000399002 CCL1P22362 96 aa7.11□□□□□ -1.27
SPTLC3-201ENST00000399002 LEMD1Q68G75 181 aa7.11□□□□□ -1.27
SPTLC3-201ENST00000399002 WDR90Q96KV7 1748 aa7.11□□□□□ -1.27
SPTLC3-201ENST00000399002 MEX3AA1L020 520 aaKnown RBP7.11□□□□□ -1.27
SPTLC3-201ENST00000399002 IZUMO1RA6ND01 250 aa7.11□□□□□ -1.27
SPTLC3-201ENST00000399002 LINC01549A6NIU2 74 aa7.11□□□□□ -1.27
SPTLC3-201ENST00000399002 H0YL77 283 aa7.11□□□□□ -1.27
SPTLC3-201ENST00000399002 GHRHP01286 108 aa7.11□□□□□ -1.27
SPTLC3-201ENST00000399002 GLRXP35754 106 aa7.11□□□□□ -1.27
SPTLC3-201ENST00000399002 CCL8P80075 99 aa7.11□□□□□ -1.27
SPTLC3-201ENST00000399002 KLRB1Q12918 225 aa7.11□□□□□ -1.27
SPTLC3-201ENST00000399002 LINC01559Q495D7 138 aa7.11□□□□□ -1.27
SPTLC3-201ENST00000399002 CENPWQ5EE01 88 aa7.11□□□□□ -1.27
SPTLC3-201ENST00000399002 CLDND2Q8NHS1 167 aa7.11□□□□□ -1.27
SPTLC3-201ENST00000399002 PARD6GQ9BYG4 376 aaPredicted RBP7.11□□□□□ -1.27
SPTLC3-201ENST00000399002 HILPDAQ9Y5L2 63 aa7.11□□□□□ -1.27
SPTLC3-201ENST00000399002 SPAARA0A1B0GVQ0 90 aa7.11□□□□□ -1.27
SPTLC3-201ENST00000399002 IL4P05112 153 aa7.11□□□□□ -1.27
SPTLC3-201ENST00000399002 GPX1P07203 203 aa7.11□□□□□ -1.27
SPTLC3-201ENST00000399002 PRSS8Q16651 343 aa7.11□□□□□ -1.27
SPTLC3-201ENST00000399002 C2orf88Q9BSF0 95 aa7.11□□□□□ -1.27
SPTLC3-201ENST00000399002 A1L4Q6 167 aa7.11□□□□□ -1.27
SPTLC3-201ENST00000399002 A8MXK9 166 aa7.11□□□□□ -1.27
SPTLC3-201ENST00000399002 CRYBB3P26998 211 aa7.11□□□□□ -1.27
SPTLC3-201ENST00000399002 LEPP41159 167 aa7.11□□□□□ -1.27
SPTLC3-201ENST00000399002 ASIPP42127 132 aa7.11□□□□□ -1.27
SPTLC3-201ENST00000399002 ARF6P62330 175 aa7.11□□□□□ -1.27
SPTLC3-201ENST00000399002 LINC00305Q7Z4B0 112 aa7.11□□□□□ -1.27
SPTLC3-201ENST00000399002 TMEM101Q96IK0 257 aa7.11□□□□□ -1.27
SPTLC3-201ENST00000399002 CCL19Q99731 98 aa7.11□□□□□ -1.27
SPTLC3-201ENST00000399002 OTORQ9NRC9 128 aa7.11□□□□□ -1.27
SPTLC3-201ENST00000399002 CHCHD2Q9Y6H1 151 aaPredicted RBP7.11□□□□□ -1.27
SPTLC3-201ENST00000399002 H3BRM9 83 aa7.1□□□□□ -1.27
SPTLC3-201ENST00000399002 F12P00748 615 aaPredicted RBP7.1□□□□□ -1.27
SPTLC3-201ENST00000399002 PF4V1P10720 104 aa7.1□□□□□ -1.27
SPTLC3-201ENST00000399002 NPBWR2P48146 333 aa7.1□□□□□ -1.27
SPTLC3-201ENST00000399002 FXYD3Q14802 87 aa7.1□□□□□ -1.27
SPTLC3-201ENST00000399002 CIARTQ8N365 385 aaPredicted RBP7.1□□□□□ -1.27
SPTLC3-201ENST00000399002 COL4A5P29400 1685 aa7.1□□□□□ -1.27
SPTLC3-201ENST00000399002 IGHV3-21A0A0B4J1V1 117 aa7.1□□□□□ -1.27
SPTLC3-201ENST00000399002 HINT1P49773 126 aaPredicted RBP7.1□□□□□ -1.27
SPTLC3-201ENST00000399002 C2orf83Q53S99 150 aa7.1□□□□□ -1.27
SPTLC3-201ENST00000399002 LAIR2Q6ISS4 152 aa7.1□□□□□ -1.27
SPTLC3-201ENST00000399002 RPP21Q9H633 154 aaKnown RBP7.1□□□□□ -1.27
SPTLC3-201ENST00000399002 TMEM74BQ9NUR3 256 aa7.1□□□□□ -1.27
SPTLC3-201ENST00000399002 ANKRD36A6QL64 1941 aa7.1□□□□□ -1.27
SPTLC3-201ENST00000399002 A0A0G2JLM5 398 aa7.1□□□□□ -1.27
SPTLC3-201ENST00000399002 NPIPB7O75200 414 aa7.1□□□□□ -1.27
SPTLC3-201ENST00000399002 CELA2AP08217 269 aa7.1□□□□□ -1.27
SPTLC3-201ENST00000399002 TBR1Q16650 682 aa7.1□□□□□ -1.27
SPTLC3-201ENST00000399002 OR4D5Q8NGN0 318 aa7.1□□□□□ -1.27
SPTLC3-201ENST00000399002 TLNRD1Q9H1K6 362 aa7.1□□□□□ -1.27
SPTLC3-201ENST00000399002 SMCHD1A6NHR9 2005 aa7.1□□□□□ -1.27
SPTLC3-201ENST00000399002 PATE3B3GLJ2 98 aa7.1□□□□□ -1.27
SPTLC3-201ENST00000399002 CACNG7P62955 275 aa7.1□□□□□ -1.27
SPTLC3-201ENST00000399002 HCP5Q6MZN7 132 aa7.1□□□□□ -1.27
SPTLC3-201ENST00000399002 TEX45Q8NA69 505 aa7.1□□□□□ -1.27
SPTLC3-201ENST00000399002 AUP1Q9Y679 476 aa7.1□□□□□ -1.27
SPTLC3-201ENST00000399002 A0A0G2JK05 382 aa7.1□□□□□ -1.27
SPTLC3-201ENST00000399002 A0A1W2PP11 408 aa7.1□□□□□ -1.27
SPTLC3-201ENST00000399002 C9orf172C9J069 976 aa7.1□□□□□ -1.27
SPTLC3-201ENST00000399002 PEX7O00628 323 aa7.1□□□□□ -1.27
SPTLC3-201ENST00000399002 LINC00312Q9Y6C7 94 aa7.1□□□□□ -1.27
SPTLC3-201ENST00000399002 SCGB1A1P11684 91 aa7.09□□□□□ -1.27
SPTLC3-201ENST00000399002 FAM159AQ6UWV7 190 aa7.09□□□□□ -1.27
SPTLC3-201ENST00000399002 RTBDNQ9BSG5 229 aaPredicted RBP7.09□□□□□ -1.27
SPTLC3-201ENST00000399002 KBTBD11-OT1A0A1B0GTJ5 212 aa7.09□□□□□ -1.27
SPTLC3-201ENST00000399002 C1QCP02747 245 aa7.09□□□□□ -1.27
SPTLC3-201ENST00000399002 SSTR5P35346 364 aa7.09□□□□□ -1.27
SPTLC3-201ENST00000399002 FAM166AQ6J272 317 aa7.09□□□□□ -1.27
SPTLC3-201ENST00000399002 PPP1R32Q7Z5V6 425 aa7.09□□□□□ -1.27
SPTLC3-201ENST00000399002 OR11H4Q8NGC9 324 aa7.09□□□□□ -1.27
SPTLC3-201ENST00000399002 SPSB2Q99619 263 aa7.09□□□□□ -1.27
SPTLC3-201ENST00000399002 AURKAIP1Q9NWT8 199 aaPredicted RBP7.09□□□□□ -1.27
SPTLC3-201ENST00000399002 A0A1B0GTI1 187 aa7.09□□□□□ -1.27
SPTLC3-201ENST00000399002 SRP19P09132 144 aaKnown RBP7.09□□□□□ -1.27
SPTLC3-201ENST00000399002 ZP1P60852 638 aa7.09□□□□□ -1.27
SPTLC3-201ENST00000399002 TFF2Q03403 129 aa7.09□□□□□ -1.27
SPTLC3-201ENST00000399002 PVRIGQ6DKI7 326 aa7.09□□□□□ -1.27
SPTLC3-201ENST00000399002 ZNF414Q96IQ9 312 aa7.09□□□□□ -1.27
SPTLC3-201ENST00000399002 ZNF826PQ6ZT77 177 aa7.09□□□□□ -1.27
SPTLC3-201ENST00000399002 WFDC6Q9BQY6 131 aa7.09□□□□□ -1.27
SPTLC3-201ENST00000399002 A0A1B0GW64 132 aa7.09□□□□□ -1.28
SPTLC3-201ENST00000399002 RECKO95980 971 aa7.09□□□□□ -1.28
SPTLC3-201ENST00000399002 APELAP0DMC3 54 aa7.09□□□□□ -1.28
SPTLC3-201ENST00000399002 SDHCQ99643 169 aaPredicted RBP7.09□□□□□ -1.28
SPTLC3-201ENST00000399002 TIMP4Q99727 224 aa7.09□□□□□ -1.28
SPTLC3-201ENST00000399002 TTC32Q5I0X7 151 aa7.08□□□□□ -1.28
SPTLC3-201ENST00000399002 TMEM106BQ9NUM4 274 aa7.08□□□□□ -1.28
SPTLC3-201ENST00000399002 NUTF2P61970 127 aaKnown RBP7.08□□□□□ -1.28
SPTLC3-201ENST00000399002 OR10J3Q5JRS4 329 aa7.08□□□□□ -1.28
SPTLC3-201ENST00000399002 TPRX1Q8N7U7 411 aa7.08□□□□□ -1.28
SPTLC3-201ENST00000399002 SLC50A1Q9BRV3 221 aa7.08□□□□□ -1.28
SPTLC3-201ENST00000399002 SSBP3Q9BWW4 388 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms