RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 FAM90A20PA6NIJ5 464 aa8.25□□□□□ -1.09
PTCHD4-202ENST00000398738 FAM90A8PA6NJQ4 464 aa8.25□□□□□ -1.09
PTCHD4-202ENST00000398738 FAM90A7PA6NKC0 464 aa8.25□□□□□ -1.09
PTCHD4-202ENST00000398738 FAM166BA8MTA8 275 aa8.25□□□□□ -1.09
PTCHD4-202ENST00000398738 FAM90A22PA8MWA6 464 aa8.25□□□□□ -1.09
PTCHD4-202ENST00000398738 FAM90A12PA8MX19 464 aa8.25□□□□□ -1.09
PTCHD4-202ENST00000398738 FAM90A5PA8MXJ8 464 aa8.25□□□□□ -1.09
PTCHD4-202ENST00000398738 FAM90A23PA8MXZ1 464 aa8.25□□□□□ -1.09
PTCHD4-202ENST00000398738 PDE6DO43924 150 aa8.25□□□□□ -1.09
PTCHD4-202ENST00000398738 FOXH1O75593 365 aa8.25□□□□□ -1.09
PTCHD4-202ENST00000398738 FAM90A15PP0C7V4 464 aa8.25□□□□□ -1.09
PTCHD4-202ENST00000398738 FAM90A13PP0C7W8 464 aa8.25□□□□□ -1.09
PTCHD4-202ENST00000398738 FAM90A14PP0C7W9 464 aa8.25□□□□□ -1.09
PTCHD4-202ENST00000398738 FAM90A24PP0C7X0 464 aa8.25□□□□□ -1.09
PTCHD4-202ENST00000398738 APH1AQ96BI3 265 aa8.25□□□□□ -1.09
PTCHD4-202ENST00000398738 TECTBQ96PL2 329 aa8.25□□□□□ -1.09
PTCHD4-202ENST00000398738 RCHY1Q96PM5 261 aa8.25□□□□□ -1.09
PTCHD4-202ENST00000398738 RNASE7Q9H1E1 156 aaKnown RBP8.25□□□□□ -1.09
PTCHD4-202ENST00000398738 SELENOKQ9Y6D0 94 aa8.25□□□□□ -1.09
PTCHD4-202ENST00000398738 WNT9BO14905 357 aa8.25□□□□□ -1.09
PTCHD4-202ENST00000398738 CA1P00915 261 aaPredicted RBP8.25□□□□□ -1.09
PTCHD4-202ENST00000398738 MGST1P10620 155 aaKnown RBP8.25□□□□□ -1.09
PTCHD4-202ENST00000398738 ANKRD39Q53RE8 183 aa8.25□□□□□ -1.09
PTCHD4-202ENST00000398738 TEX43Q6ZNM6 134 aa8.25□□□□□ -1.09
PTCHD4-202ENST00000398738 CARFQ8N187 725 aa8.25□□□□□ -1.09
PTCHD4-202ENST00000398738 NHLRC2Q8NBF2 726 aa8.25□□□□□ -1.09
PTCHD4-202ENST00000398738 C20orf144Q9BQM9 153 aa8.25□□□□□ -1.09
PTCHD4-202ENST00000398738 DCTN5Q9BTE1 182 aa8.25□□□□□ -1.09
PTCHD4-202ENST00000398738 KCNIP1Q9NZI2 227 aa8.25□□□□□ -1.09
PTCHD4-202ENST00000398738 HSPB7Q9UBY9 170 aa8.25□□□□□ -1.09
PTCHD4-202ENST00000398738 TP73-AS1Q9UF72 201 aa8.25□□□□□ -1.09
PTCHD4-202ENST00000398738 PSG11Q9UQ72 335 aa8.25□□□□□ -1.09
PTCHD4-202ENST00000398738 PI4KAP42356 2102 aa8.25□□□□□ -1.09
PTCHD4-202ENST00000398738 PINLYPA6NC86 204 aa8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 COX6A1P12074 109 aa8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 B3GALT5-AS1P59052 145 aa8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 RANP62826 216 aaKnown RBP8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 PAFAH1B2P68402 229 aa8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 FOXL1Q12952 345 aa8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 PSG7Q13046 419 aa8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 EDDM3AQ14507 147 aa8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 ALKBH6Q3KRA9 238 aa8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 MMD2Q8IY49 270 aa8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 ST6GALNAC6Q969X2 333 aa8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 SPSB4Q96A44 273 aa8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 NRN1Q9NPD7 142 aa8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 YTHDF2Q9Y5A9 579 aaKnown RBP8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 TIMM9Q9Y5J7 89 aa8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 TIMM8BQ9Y5J9 83 aaPredicted RBP8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 DCHS1Q96JQ0 3298 aa8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 ABCA1O95477 2261 aa8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 C10orf142B7Z368 130 aa8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 K7EN84 100 aa8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 CCL25O15444 150 aa8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 LINC00614P0C842 121 aa8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 ASCL3Q9NQ33 180 aa8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 ZFP30Q9Y2G7 519 aa8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 PSPNO60542 156 aa8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 YPEL1O60688 119 aa8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 FCGR3BO75015 233 aa8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 MT-CO3P00414 261 aa8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 SRIP30626 198 aa8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 SSTR5P35346 364 aa8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 GALMQ96C23 342 aa8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 FAM122AQ96E09 287 aa8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 GUCD1Q96NT3 240 aa8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 YPEL2Q96QA6 119 aa8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 HES7Q9BYE0 225 aa8.24□□□□□ -1.09
PTCHD4-202ENST00000398738 PMS2P5A8MQ11 134 aa8.23□□□□□ -1.09
PTCHD4-202ENST00000398738 NEURL1O76050 574 aa8.23□□□□□ -1.09
PTCHD4-202ENST00000398738 UBE2NP61088 152 aaKnown RBP8.23□□□□□ -1.09
PTCHD4-202ENST00000398738 ATP6V1FQ16864 119 aa8.23□□□□□ -1.09
PTCHD4-202ENST00000398738 OR4P4Q8NGL7 312 aa8.23□□□□□ -1.09
PTCHD4-202ENST00000398738 C5orf30Q96GV9 206 aa8.23□□□□□ -1.09
PTCHD4-202ENST00000398738 UBE2ZQ9H832 354 aaPredicted RBP8.23□□□□□ -1.09
PTCHD4-202ENST00000398738 SEPSECSQ9HD40 501 aaKnown RBP8.23□□□□□ -1.09
PTCHD4-202ENST00000398738 LAMTOR2Q9Y2Q5 125 aa8.23□□□□□ -1.09
PTCHD4-202ENST00000398738 ZNF318Q5VUA4 2279 aa8.23□□□□□ -1.09
PTCHD4-202ENST00000398738 LINC00473A8K010 186 aa8.23□□□□□ -1.09
PTCHD4-202ENST00000398738 A8MXE2 369 aa8.23□□□□□ -1.09
PTCHD4-202ENST00000398738 C12orf77C9JDV5 145 aa8.23□□□□□ -1.09
PTCHD4-202ENST00000398738 SRD5A2P31213 254 aa8.23□□□□□ -1.09
PTCHD4-202ENST00000398738 CEACAM8P31997 349 aaPredicted RBP8.23□□□□□ -1.09
PTCHD4-202ENST00000398738 GAGE1Q13065 139 aa8.23□□□□□ -1.09
PTCHD4-202ENST00000398738 ACSF3Q4G176 576 aaPredicted RBP8.23□□□□□ -1.09
PTCHD4-202ENST00000398738 Q8NFD4 153 aa8.23□□□□□ -1.09
PTCHD4-202ENST00000398738 IMMP1LQ96LU5 166 aa8.23□□□□□ -1.09
PTCHD4-202ENST00000398738 SSBP3Q9BWW4 388 aaPredicted RBP8.23□□□□□ -1.09
PTCHD4-202ENST00000398738 KCNIP2Q9NS61 270 aa8.23□□□□□ -1.09
PTCHD4-202ENST00000398738 FZR1Q9UM11 496 aa8.23□□□□□ -1.09
PTCHD4-202ENST00000398738 HEATR1Q9H583 2144 aaKnown RBP8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 CBY3A6NI87 242 aa8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 RNF212BA8MTL3 300 aa8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 NDUFB8O95169 186 aa8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 CGAP01215 116 aa8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 CATR1Q13166 79 aa8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 Q56UQ5 140 aa8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 PRAMEF5Q5TYX0 476 aa8.22□□□□□ -1.09
PTCHD4-202ENST00000398738 PRAMEF6Q5VXH4 476 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms