RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 FAM157CP0CG43 387 aa5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 GUCA1AP43080 201 aaPredicted RBP5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 AMMECR1LQ6DCA0 310 aa5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 ABHD12Q8N2K0 398 aa5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 LINC00477Q96M19 166 aa5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 MS4A10Q96PG2 267 aa5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 AMELYQ99218 206 aa5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 BGLAPP02818 100 aa5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 ORM2P19652 201 aa5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 P2RY1P47900 373 aa5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 GRB2P62993 217 aaKnown RBP5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 C1orf61Q13536 156 aa5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 FNDC7Q5VTL7 733 aa5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 DHRS13Q6UX07 377 aa5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 DTX2Q86UW9 622 aa5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 ZNF429Q86V71 674 aa5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 EIF5A2Q9GZV4 153 aaKnown RBP5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 OTOGLQ3ZCN5 2332 aa5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 ODAMA1E959 279 aa5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 PRSS46E5RG02 174 aa5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 TM4SF5O14894 197 aa5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 DUS4LO95620 317 aaKnown RBP5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 GPANK1O95872 356 aa5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 PRH1P02810 166 aa5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 GRPP07492 148 aa5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 COL8A1P27658 744 aa5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 RPS28P62857 69 aaKnown RBP5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 PMVKQ15126 192 aa5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 C1orf100Q5SVJ3 147 aa5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 UNQ6126/PRO20091Q6UXV3 157 aa5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 FOXI2Q6ZQN5 318 aa5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 LIAT1Q6ZQX7 453 aa5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 SLC22A24Q8N4F4 322 aa5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 METTL27Q8N6F8 245 aaPredicted RBP5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 OR5P3Q8WZ94 311 aa5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 KCNJ16Q9NPI9 418 aa5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 KIAA1456Q9P272 454 aa5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 AKAP9Q99996 3911 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 TMED7-TICAM2A0A0A6YYA0 188 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 TMEM8BA6NDV4 472 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 FOXS1O43638 330 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 PPP1CAP62136 330 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 SLC35A1P78382 337 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 ZNF101Q8IZC7 436 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 TMEM178AQ8NBL3 297 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 OR13H1Q8NG92 308 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 SLC25A43Q8WUT9 341 aaPredicted RBP5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 SECTM1Q8WVN6 248 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 CST11Q9H112 138 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 KLK13Q9UKR3 277 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 VSIG4Q9Y279 399 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 TMED7Q9Y3B3 224 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 MGAQ8IWI9 3026 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 A0A1B0GW64 132 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 CDC14CA4D256 554 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 CELA2AP08217 269 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 CTLA4P16410 223 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 ZNF20P17024 532 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 IGFBP3P17936 291 aaPredicted RBP5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 REG1BP48304 166 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 ZNF117Q03924 483 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 FMODQ06828 376 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 PSG7Q13046 419 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 C1orf140Q5VVS0 124 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 ZNF611Q8N823 705 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 OR5D14Q8NGL3 314 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 AQP3Q92482 292 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 NAA38Q9BRA0 125 aaKnown RBP5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 PRDM14Q9GZV8 571 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 POLR1DQ9Y2S0 133 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 SIT1Q9Y3P8 196 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 CSAG2Q9Y5P2 127 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 FREM3P0C091 2139 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 NCOR2Q9Y618 2525 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 IGLV1-36A0A0B4J1U3 117 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 C9JAW5 83 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 USP17L23D6RBM5 183 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 MPDU1O75352 247 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 CD3EP07766 207 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 ZNF542PQ5EBM4 170 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 PARM1Q6UWI2 310 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 C8orf86Q6ZUL3 223 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 PRR22Q8IZ63 422 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 TMEM86BQ8N661 226 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 PLPPR1Q8TBJ4 325 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 DNAJA3Q96EY1 480 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 C1QTNF5Q9BXJ0 243 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 NMES1Q9C002 83 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 TCEAL2Q9H3H9 227 aaPredicted RBP5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 PRNDQ9UKY0 176 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 HIGD1AQ9Y241 93 aa5.55□□□□□ -1.52
TM9SF4-202ENST00000398022 A0A1W2PQD3 144 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 MRPS21P82921 87 aaKnown RBP5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 MEF2CQ06413 473 aaPredicted RBP5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 RNPS1Q15287 305 aaKnown RBP5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 Q6ZVH6 145 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 SCCPDHQ8NBX0 429 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 OR51A2Q8NGJ7 313 aa5.54□□□□□ -1.52
TM9SF4-202ENST00000398022 CLDN23Q96B33 292 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms