RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 MAGT1Q9H0U3 335 aa22.05■■□□□ 1.12
CPNE1-203ENST00000397442 C11orf1Q9H5F2 150 aa22.05■■□□□ 1.12
CPNE1-203ENST00000397442 SOX21Q9Y651 276 aaPredicted RBP22.05■■□□□ 1.12
CPNE1-203ENST00000397442 HMSDA8MTL9 139 aa22.04■■□□□ 1.12
CPNE1-203ENST00000397442 FSHBP01225 129 aa22.04■■□□□ 1.12
CPNE1-203ENST00000397442 KRTAP1-1Q07627 177 aa22.04■■□□□ 1.12
CPNE1-203ENST00000397442 LAMTOR1Q6IAA8 161 aa22.04■■□□□ 1.12
CPNE1-203ENST00000397442 TMEM65Q6PI78 240 aa22.04■■□□□ 1.12
CPNE1-203ENST00000397442 RNF5Q99942 180 aa22.04■■□□□ 1.12
CPNE1-203ENST00000397442 QTRT1Q9BXR0 403 aaKnown RBP22.04■■□□□ 1.12
CPNE1-203ENST00000397442 ZFP57Q9NU63 452 aa22.04■■□□□ 1.12
CPNE1-203ENST00000397442 HSPB7Q9UBY9 170 aa22.04■■□□□ 1.12
CPNE1-203ENST00000397442 UPK2O00526 184 aa22.04■■□□□ 1.12
CPNE1-203ENST00000397442 KBTBD11O94819 623 aa22.04■■□□□ 1.12
CPNE1-203ENST00000397442 SNRNP70P08621 437 aaKnown RBP22.04■■□□□ 1.12
CPNE1-203ENST00000397442 PET100P0DJ07 73 aa22.04■■□□□ 1.12
CPNE1-203ENST00000397442 UBE2KP61086 200 aa22.04■■□□□ 1.12
CPNE1-203ENST00000397442 EBI3Q14213 229 aa22.04■■□□□ 1.12
CPNE1-203ENST00000397442 EAF1Q96JC9 268 aaPredicted RBP22.04■■□□□ 1.12
CPNE1-203ENST00000397442 TET2Q6N021 2002 aaPredicted RBP22.03■■□□□ 1.12
CPNE1-203ENST00000397442 TNCP24821 2201 aa22.03■■□□□ 1.12
CPNE1-203ENST00000397442 C15orf61A6NNL5 157 aa22.03■■□□□ 1.12
CPNE1-203ENST00000397442 FAM90A26D6RGX4 464 aa22.03■■□□□ 1.12
CPNE1-203ENST00000397442 TNFRSF9Q07011 255 aa22.03■■□□□ 1.12
CPNE1-203ENST00000397442 C9orf62Q8N4C0 152 aa22.03■■□□□ 1.12
CPNE1-203ENST00000397442 OR4A16Q8NH70 328 aa22.03■■□□□ 1.12
CPNE1-203ENST00000397442 TMEM14BQ9NUH8 114 aa22.03■■□□□ 1.12
CPNE1-203ENST00000397442 SLC25A17O43808 307 aa22.02■■□□□ 1.12
CPNE1-203ENST00000397442 MOSP00540 346 aa22.02■■□□□ 1.12
CPNE1-203ENST00000397442 CRYGBP07316 175 aa22.02■■□□□ 1.12
CPNE1-203ENST00000397442 PSG5Q15238 335 aa22.02■■□□□ 1.12
CPNE1-203ENST00000397442 ZNF546Q86UE3 836 aa22.02■■□□□ 1.12
CPNE1-203ENST00000397442 ZNF429Q86V71 674 aa22.02■■□□□ 1.12
CPNE1-203ENST00000397442 Q8N6K4 173 aa22.02■■□□□ 1.12
CPNE1-203ENST00000397442 TMEM167AQ8TBQ9 72 aa22.02■■□□□ 1.12
CPNE1-203ENST00000397442 MEGF9Q9H1U4 602 aa22.02■■□□□ 1.12
CPNE1-203ENST00000397442 TNFSF18Q9UNG2 199 aa22.02■■□□□ 1.12
CPNE1-203ENST00000397442 ARPC5O15511 151 aa22.01■■□□□ 1.11
CPNE1-203ENST00000397442 KCNAB3O43448 404 aa22.01■■□□□ 1.11
CPNE1-203ENST00000397442 RBMXL2O75526 392 aaKnown RBP22.01■■□□□ 1.11
CPNE1-203ENST00000397442 MRGPRG-AS1Q2M3A8 158 aa22.01■■□□□ 1.11
CPNE1-203ENST00000397442 VMA21Q3ZAQ7 101 aa22.01■■□□□ 1.11
CPNE1-203ENST00000397442 FAM120AOSQ5T036 256 aa22.01■■□□□ 1.11
CPNE1-203ENST00000397442 VSTM2AQ8TAG5 236 aa22.01■■□□□ 1.11
CPNE1-203ENST00000397442 TSNAXQ99598 290 aaKnown RBP22.01■■□□□ 1.11
CPNE1-203ENST00000397442 TPSG1Q9NRR2 321 aa22.01■■□□□ 1.11
CPNE1-203ENST00000397442 FOXA2Q9Y261 457 aaPredicted RBP22.01■■□□□ 1.11
CPNE1-203ENST00000397442 SSSCA1O60232 199 aa22.01■■□□□ 1.11
CPNE1-203ENST00000397442 SNAPC5O75971 98 aa22.01■■□□□ 1.11
CPNE1-203ENST00000397442 TMEM50AO95807 157 aa22.01■■□□□ 1.11
CPNE1-203ENST00000397442 RLN2P04090 185 aa22.01■■□□□ 1.11
CPNE1-203ENST00000397442 F2RL1P55085 397 aa22.01■■□□□ 1.11
CPNE1-203ENST00000397442 HNF4GQ14541 408 aa22.01■■□□□ 1.11
CPNE1-203ENST00000397442 LGALSLQ3ZCW2 172 aaPredicted RBP22.01■■□□□ 1.11
CPNE1-203ENST00000397442 OR2T10Q8NGZ9 312 aa22.01■■□□□ 1.11
CPNE1-203ENST00000397442 DCUN1D4Q92564 292 aa22.01■■□□□ 1.11
CPNE1-203ENST00000397442 CHST1O43916 411 aa22■■□□□ 1.11
CPNE1-203ENST00000397442 CXCL2P19875 107 aa22■■□□□ 1.11
CPNE1-203ENST00000397442 BRS3P32247 399 aa22■■□□□ 1.11
CPNE1-203ENST00000397442 TEX45Q8NA69 505 aa22■■□□□ 1.11
CPNE1-203ENST00000397442 OR4A5Q8NH83 315 aa22■■□□□ 1.11
CPNE1-203ENST00000397442 SYNGR2O43760 224 aa21.99■■□□□ 1.11
CPNE1-203ENST00000397442 MYOD1P15172 320 aa21.99■■□□□ 1.11
CPNE1-203ENST00000397442 BPIFB3P59826 476 aa21.99■■□□□ 1.11
CPNE1-203ENST00000397442 HES1Q14469 280 aa21.99■■□□□ 1.11
CPNE1-203ENST00000397442 PDLIM3Q53GG5 364 aaPredicted RBP21.99■■□□□ 1.11
CPNE1-203ENST00000397442 THNSL2Q86YJ6 484 aa21.99■■□□□ 1.11
CPNE1-203ENST00000397442 RBKSQ9H477 322 aa21.99■■□□□ 1.11
CPNE1-203ENST00000397442 OTOGQ6ZRI0 2925 aa21.99■■□□□ 1.11
CPNE1-203ENST00000397442 FLNBO75369 2602 aaKnown RBP21.99■■□□□ 1.11
CPNE1-203ENST00000397442 RNF222A6NCQ9 220 aa21.98■■□□□ 1.11
CPNE1-203ENST00000397442 E5RGE8 158 aa21.98■■□□□ 1.11
CPNE1-203ENST00000397442 PAX9P55771 341 aa21.98■■□□□ 1.11
CPNE1-203ENST00000397442 NPBQ8NG41 125 aa21.98■■□□□ 1.11
CPNE1-203ENST00000397442 OR52E5Q8NH55 327 aa21.98■■□□□ 1.11
CPNE1-203ENST00000397442 NANPQ8TBE9 248 aa21.98■■□□□ 1.11
CPNE1-203ENST00000397442 NUP50Q9UKX7 468 aa21.98■■□□□ 1.11
CPNE1-203ENST00000397442 PRNDQ9UKY0 176 aa21.98■■□□□ 1.11
CPNE1-203ENST00000397442 SIGLEC9Q9Y336 463 aa21.98■■□□□ 1.11
CPNE1-203ENST00000397442 BOLA1Q9Y3E2 137 aa21.98■■□□□ 1.11
CPNE1-203ENST00000397442 WRBO00258 174 aa21.98■■□□□ 1.11
CPNE1-203ENST00000397442 SPDEFO95238 335 aa21.98■■□□□ 1.11
CPNE1-203ENST00000397442 DYNLT3P51808 116 aa21.98■■□□□ 1.11
CPNE1-203ENST00000397442 PJVKQ0ZLH3 352 aa21.98■■□□□ 1.11
CPNE1-203ENST00000397442 PIFOQ8TCI5 191 aa21.98■■□□□ 1.11
CPNE1-203ENST00000397442 ZNF430Q9H8G1 570 aaPredicted RBP21.98■■□□□ 1.11
CPNE1-203ENST00000397442 PLSCR3Q9NRY6 295 aa21.98■■□□□ 1.11
CPNE1-203ENST00000397442 FAM96BQ9Y3D0 163 aa21.98■■□□□ 1.11
CPNE1-203ENST00000397442 BAHCC1Q9P281 2608 aa21.97■■□□□ 1.11
CPNE1-203ENST00000397442 MSGN1A6NI15 193 aa21.97■■□□□ 1.11
CPNE1-203ENST00000397442 NDUFA3O95167 84 aa21.97■■□□□ 1.11
CPNE1-203ENST00000397442 FAM106CPP0CH98 169 aa21.97■■□□□ 1.11
CPNE1-203ENST00000397442 RPL8P62917 257 aaKnown RBP21.97■■□□□ 1.11
CPNE1-203ENST00000397442 MMDQ15546 238 aa21.97■■□□□ 1.11
CPNE1-203ENST00000397442 ZDHHC16Q969W1 377 aa21.97■■□□□ 1.11
CPNE1-203ENST00000397442 MFFQ9GZY8 342 aa21.97■■□□□ 1.11
CPNE1-203ENST00000397442 METTL1Q9UBP6 276 aaKnown RBP21.97■■□□□ 1.11
CPNE1-203ENST00000397442 ACANP16112 2415 aa21.97■■□□□ 1.11
CPNE1-203ENST00000397442 RRHO14718 337 aa21.96■■□□□ 1.11
CPNE1-203ENST00000397442 NBR2O15453 112 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms