RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 RCL1Q9Y2P8 373 aaKnown RBP10.94□□□□□ -0.66
MCF2L-209ENST00000397036 ZNF257Q9Y2Q1 563 aa10.94□□□□□ -0.66
MCF2L-209ENST00000397036 HILPDAQ9Y5L2 63 aa10.94□□□□□ -0.66
MCF2L-209ENST00000397036 C15orf61A6NNL5 157 aa10.94□□□□□ -0.66
MCF2L-209ENST00000397036 SYNGR2O43760 224 aa10.94□□□□□ -0.66
MCF2L-209ENST00000397036 CRYGBP07316 175 aa10.94□□□□□ -0.66
MCF2L-209ENST00000397036 BRS3P32247 399 aa10.94□□□□□ -0.66
MCF2L-209ENST00000397036 S100A10P60903 97 aa10.94□□□□□ -0.66
MCF2L-209ENST00000397036 SPCS3P61009 180 aa10.94□□□□□ -0.66
MCF2L-209ENST00000397036 POLR2GP62487 172 aaKnown RBP eCLIP10.94□□□□□ -0.66
MCF2L-209ENST00000397036 VMA21Q3ZAQ7 101 aa10.94□□□□□ -0.66
MCF2L-209ENST00000397036 INO80EQ8NBZ0 244 aaPredicted RBP10.94□□□□□ -0.66
MCF2L-209ENST00000397036 SMIM8Q96KF7 97 aa10.94□□□□□ -0.66
MCF2L-209ENST00000397036 AQP10Q96PS8 301 aa10.94□□□□□ -0.66
MCF2L-209ENST00000397036 MFFQ9GZY8 342 aa10.94□□□□□ -0.66
MCF2L-209ENST00000397036 LSM5Q9Y4Y9 91 aaKnown RBP10.94□□□□□ -0.66
MCF2L-209ENST00000397036 WSB1Q9Y6I7 421 aa10.94□□□□□ -0.66
MCF2L-209ENST00000397036 TNCP24821 2201 aa10.93□□□□□ -0.66
MCF2L-209ENST00000397036 A0A1W2PRD5 423 aa10.93□□□□□ -0.66
MCF2L-209ENST00000397036 A0A1W2PRF3 423 aa10.93□□□□□ -0.66
MCF2L-209ENST00000397036 A0A1W2PRM7 423 aa10.93□□□□□ -0.66
MCF2L-209ENST00000397036 WRBO00258 174 aa10.93□□□□□ -0.66
MCF2L-209ENST00000397036 ARPC5O15511 151 aa10.93□□□□□ -0.66
MCF2L-209ENST00000397036 CHST1O43916 411 aa10.93□□□□□ -0.66
MCF2L-209ENST00000397036 GPR137BO60478 399 aa10.93□□□□□ -0.66
MCF2L-209ENST00000397036 KBTBD11O94819 623 aa10.93□□□□□ -0.66
MCF2L-209ENST00000397036 SCGB1D2O95969 90 aa10.93□□□□□ -0.66
MCF2L-209ENST00000397036 MOSP00540 346 aa10.93□□□□□ -0.66
MCF2L-209ENST00000397036 SAA1P0DJI8 122 aaPredicted RBP10.93□□□□□ -0.66
MCF2L-209ENST00000397036 CXCL2P19875 107 aa10.93□□□□□ -0.66
MCF2L-209ENST00000397036 NUP62P37198 522 aaPredicted RBP10.93□□□□□ -0.66
MCF2L-209ENST00000397036 HSPE1P61604 102 aaKnown RBP10.93□□□□□ -0.66
MCF2L-209ENST00000397036 AANATQ16613 207 aa10.93□□□□□ -0.66
MCF2L-209ENST00000397036 SSX9Q7RTT3 188 aa10.93□□□□□ -0.66
MCF2L-209ENST00000397036 PDZD9Q8IXQ8 264 aa10.93□□□□□ -0.66
MCF2L-209ENST00000397036 VKORC1L1Q8N0U8 176 aa10.93□□□□□ -0.66
MCF2L-209ENST00000397036 DYNAPQ8N1N2 210 aa10.93□□□□□ -0.66
MCF2L-209ENST00000397036 KCNRGQ8N5I3 272 aa10.93□□□□□ -0.66
MCF2L-209ENST00000397036 NPBQ8NG41 125 aa10.93□□□□□ -0.66
MCF2L-209ENST00000397036 OR2T10Q8NGZ9 312 aa10.93□□□□□ -0.66
MCF2L-209ENST00000397036 CIB3Q96Q77 187 aaPredicted RBP10.93□□□□□ -0.66
MCF2L-209ENST00000397036 IGHV3-72A0A0B4J1Y9 119 aa10.92□□□□□ -0.66
MCF2L-209ENST00000397036 RNF222A6NCQ9 220 aa10.92□□□□□ -0.66
MCF2L-209ENST00000397036 AVPP01185 164 aa10.92□□□□□ -0.66
MCF2L-209ENST00000397036 FSHBP01225 129 aa10.92□□□□□ -0.66
MCF2L-209ENST00000397036 MAS1LP35410 378 aa10.92□□□□□ -0.66
MCF2L-209ENST00000397036 KLF17Q5JT82 389 aaPredicted RBP10.92□□□□□ -0.66
MCF2L-209ENST00000397036 TEX29Q8N6K0 151 aa10.92□□□□□ -0.66
MCF2L-209ENST00000397036 Q8N6K4 173 aa10.92□□□□□ -0.66
MCF2L-209ENST00000397036 OR8H1Q8NGG4 311 aa10.92□□□□□ -0.66
MCF2L-209ENST00000397036 OR5B3Q8NH48 314 aa10.92□□□□□ -0.66
MCF2L-209ENST00000397036 GRPEL2Q8TAA5 225 aa10.92□□□□□ -0.66
MCF2L-209ENST00000397036 C17orf50Q8WW18 174 aa10.92□□□□□ -0.66
MCF2L-209ENST00000397036 DCUN1D4Q92564 292 aa10.92□□□□□ -0.66
MCF2L-209ENST00000397036 HSPB11Q9Y547 144 aa10.92□□□□□ -0.66
MCF2L-209ENST00000397036 CSMD2Q7Z408 3487 aa10.92□□□□□ -0.66
MCF2L-209ENST00000397036 ITPR3Q14573 2671 aa10.91□□□□□ -0.66
MCF2L-209ENST00000397036 TRAV3A0A0B4J244 114 aa10.91□□□□□ -0.66
MCF2L-209ENST00000397036 TRAV40A0A0B4J280 105 aa10.91□□□□□ -0.66
MCF2L-209ENST00000397036 INS-IGF2F8WCM5 200 aa10.91□□□□□ -0.66
MCF2L-209ENST00000397036 L7N2F9 121 aa10.91□□□□□ -0.66
MCF2L-209ENST00000397036 TSC22D2O75157 780 aa10.91□□□□□ -0.66
MCF2L-209ENST00000397036 RBMXL2O75526 392 aaKnown RBP10.91□□□□□ -0.66
MCF2L-209ENST00000397036 NDUFA3O95167 84 aa10.91□□□□□ -0.66
MCF2L-209ENST00000397036 FAM106CPP0CH98 169 aa10.91□□□□□ -0.66
MCF2L-209ENST00000397036 IGHV4-38-2P0DP08 117 aa10.91□□□□□ -0.66
MCF2L-209ENST00000397036 S100A11P31949 105 aa10.91□□□□□ -0.66
MCF2L-209ENST00000397036 PAX9P55771 341 aa10.91□□□□□ -0.66
MCF2L-209ENST00000397036 RPL8P62917 257 aaKnown RBP10.91□□□□□ -0.66
MCF2L-209ENST00000397036 PSG5Q15238 335 aa10.91□□□□□ -0.66
MCF2L-209ENST00000397036 MAPK1IP1LQ8NDC0 245 aa10.91□□□□□ -0.66
MCF2L-209ENST00000397036 EAF1Q96JC9 268 aaPredicted RBP10.91□□□□□ -0.66
MCF2L-209ENST00000397036 RITA1Q96K30 269 aa10.91□□□□□ -0.66
MCF2L-209ENST00000397036 LYRM2Q9NU23 88 aaPredicted RBP10.91□□□□□ -0.66
MCF2L-209ENST00000397036 CR1P17927 2039 aa10.91□□□□□ -0.66
MCF2L-209ENST00000397036 VPS13CQ709C8 3753 aa10.9□□□□□ -0.66
MCF2L-209ENST00000397036 TMEM50AO95807 157 aa10.9□□□□□ -0.66
MCF2L-209ENST00000397036 HKR1P10072 659 aa10.9□□□□□ -0.66
MCF2L-209ENST00000397036 RPL12P30050 165 aaKnown RBP10.9□□□□□ -0.66
MCF2L-209ENST00000397036 RPL23AP62750 156 aaKnown RBP10.9□□□□□ -0.66
MCF2L-209ENST00000397036 VAMP2P63027 116 aa10.9□□□□□ -0.66
MCF2L-209ENST00000397036 C9orf139Q6ZV77 190 aa10.9□□□□□ -0.66
MCF2L-209ENST00000397036 MMD2Q8IY49 270 aa10.9□□□□□ -0.66
MCF2L-209ENST00000397036 OR2C3Q8N628 320 aa10.9□□□□□ -0.66
MCF2L-209ENST00000397036 QTRT1Q9BXR0 403 aaKnown RBP10.9□□□□□ -0.66
MCF2L-209ENST00000397036 SLC25A31Q9H0C2 315 aa10.9□□□□□ -0.66
MCF2L-209ENST00000397036 MAGT1Q9H0U3 335 aa10.9□□□□□ -0.66
MCF2L-209ENST00000397036 RBKSQ9H477 322 aa10.9□□□□□ -0.66
MCF2L-209ENST00000397036 SIGLEC9Q9Y336 463 aa10.9□□□□□ -0.66
MCF2L-209ENST00000397036 RRHO14718 337 aa10.89□□□□□ -0.67
MCF2L-209ENST00000397036 SSSCA1O60232 199 aa10.89□□□□□ -0.67
MCF2L-209ENST00000397036 IFNA17P01571 189 aa10.89□□□□□ -0.67
MCF2L-209ENST00000397036 IGKV1D-33P01593 117 aa10.89□□□□□ -0.67
MCF2L-209ENST00000397036 IGKV1-33P01594 117 aa10.89□□□□□ -0.67
MCF2L-209ENST00000397036 SNRNP70P08621 437 aaKnown RBP10.89□□□□□ -0.67
MCF2L-209ENST00000397036 ATP5IP56385 69 aaPredicted RBP10.89□□□□□ -0.67
MCF2L-209ENST00000397036 PRSS8Q16651 343 aa10.89□□□□□ -0.67
MCF2L-209ENST00000397036 MRGPRG-AS1Q2M3A8 158 aa10.89□□□□□ -0.67
MCF2L-209ENST00000397036 TMUB2Q71RG4 321 aa10.89□□□□□ -0.67
MCF2L-209ENST00000397036 OR1L8Q8NGR8 309 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms