RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 ARHGAP21Q5T5U3 1957 aa12.59□□□□□ -0.39
MCF2L-205ENST00000397017 EXPH5Q8NEV8 1989 aa12.58□□□□□ -0.39
MCF2L-205ENST00000397017 SRSF3P84103 164 aaKnown RBP12.58□□□□□ -0.39
MCF2L-205ENST00000397017 C10orf55Q5SWW7 151 aa12.58□□□□□ -0.39
MCF2L-205ENST00000397017 Q6ZPA2 131 aa12.58□□□□□ -0.39
MCF2L-205ENST00000397017 MRPL41Q8IXM3 137 aaKnown RBP12.58□□□□□ -0.39
MCF2L-205ENST00000397017 ST6GALNAC3Q8NDV1 305 aa12.58□□□□□ -0.39
MCF2L-205ENST00000397017 FRZBQ92765 325 aa12.58□□□□□ -0.39
MCF2L-205ENST00000397017 SMIM7Q9BQ49 75 aa12.58□□□□□ -0.39
MCF2L-205ENST00000397017 HES4Q9HCC6 221 aa12.58□□□□□ -0.39
MCF2L-205ENST00000397017 WNK1Q9H4A3 2382 aa12.58□□□□□ -0.39
MCF2L-205ENST00000397017 IGHV3-35A0A0C4DH35 117 aa12.58□□□□□ -0.4
MCF2L-205ENST00000397017 DUTP33316 252 aaKnown RBP12.58□□□□□ -0.4
MCF2L-205ENST00000397017 GAFA1Q96PS6 74 aa12.58□□□□□ -0.4
MCF2L-205ENST00000397017 DUXBA0A1W2PPF3 345 aa12.58□□□□□ -0.4
MCF2L-205ENST00000397017 TMEM11P17152 192 aa12.58□□□□□ -0.4
MCF2L-205ENST00000397017 TDGF1P3P51864 188 aa12.58□□□□□ -0.4
MCF2L-205ENST00000397017 NCMAPQ5T1S8 102 aa12.58□□□□□ -0.4
MCF2L-205ENST00000397017 TMEM200BQ69YZ2 307 aa12.58□□□□□ -0.4
MCF2L-205ENST00000397017 SLC24A4Q8NFF2 622 aa12.58□□□□□ -0.4
MCF2L-205ENST00000397017 OR5B12Q96R08 314 aa12.58□□□□□ -0.4
MCF2L-205ENST00000397017 TUBD1Q9UJT1 453 aa12.58□□□□□ -0.4
MCF2L-205ENST00000397017 OR9G9P0C7N8 305 aa12.57□□□□□ -0.4
MCF2L-205ENST00000397017 ZP3P21754 424 aa12.57□□□□□ -0.4
MCF2L-205ENST00000397017 SULT1A2P50226 295 aa12.57□□□□□ -0.4
MCF2L-205ENST00000397017 RAB5CP51148 216 aa12.57□□□□□ -0.4
MCF2L-205ENST00000397017 RND3P61587 244 aa12.57□□□□□ -0.4
MCF2L-205ENST00000397017 MIC13Q5XKP0 118 aa12.57□□□□□ -0.4
MCF2L-205ENST00000397017 OR4A47Q6IF82 309 aa12.57□□□□□ -0.4
MCF2L-205ENST00000397017 FAM216AQ8WUB2 273 aa12.57□□□□□ -0.4
MCF2L-205ENST00000397017 PITX3O75364 302 aa12.57□□□□□ -0.4
MCF2L-205ENST00000397017 SEC11BP0C7V7 166 aa12.57□□□□□ -0.4
MCF2L-205ENST00000397017 CD1BP29016 333 aa12.57□□□□□ -0.4
MCF2L-205ENST00000397017 FAM78BQ5VT40 261 aa12.57□□□□□ -0.4
MCF2L-205ENST00000397017 LFNGQ8NES3 379 aa12.57□□□□□ -0.4
MCF2L-205ENST00000397017 CABLES2Q9BTV7 478 aa12.57□□□□□ -0.4
MCF2L-205ENST00000397017 ZNF737O75373 536 aa12.57□□□□□ -0.4
MCF2L-205ENST00000397017 PRB4P10163 310 aaPredicted RBP12.57□□□□□ -0.4
MCF2L-205ENST00000397017 MGST1P10620 155 aaKnown RBP12.57□□□□□ -0.4
MCF2L-205ENST00000397017 HSD17B13Q7Z5P4 300 aaPredicted RBP12.57□□□□□ -0.4
MCF2L-205ENST00000397017 LINC00469Q8N7U9 141 aa12.57□□□□□ -0.4
MCF2L-205ENST00000397017 OR9G1Q8NH87 305 aa12.57□□□□□ -0.4
MCF2L-205ENST00000397017 NEIL1Q96FI4 390 aaPredicted RBP12.57□□□□□ -0.4
MCF2L-205ENST00000397017 RPRMQ9NS64 109 aa12.57□□□□□ -0.4
MCF2L-205ENST00000397017 LOC105371242A0A075B767 164 aa12.56□□□□□ -0.4
MCF2L-205ENST00000397017 GATA2P23769 480 aaPredicted RBP12.56□□□□□ -0.4
MCF2L-205ENST00000397017 DVL1P1P54792 670 aaPredicted RBP12.56□□□□□ -0.4
MCF2L-205ENST00000397017 ACSM6Q6P461 480 aa12.56□□□□□ -0.4
MCF2L-205ENST00000397017 CACFD1Q9UGQ2 172 aa12.56□□□□□ -0.4
MCF2L-205ENST00000397017 KPTNQ9Y664 436 aa12.56□□□□□ -0.4
MCF2L-205ENST00000397017 CDC34P49427 236 aaPredicted RBP12.56□□□□□ -0.4
MCF2L-205ENST00000397017 RPL8P62917 257 aaKnown RBP12.56□□□□□ -0.4
MCF2L-205ENST00000397017 SAT2Q96F10 170 aaPredicted RBP12.56□□□□□ -0.4
MCF2L-205ENST00000397017 FAM103A1Q9BTL3 118 aaKnown RBP12.56□□□□□ -0.4
MCF2L-205ENST00000397017 TIMM8BQ9Y5J9 83 aaPredicted RBP12.56□□□□□ -0.4
MCF2L-205ENST00000397017 NAV3Q8IVL0 2385 aa12.56□□□□□ -0.4
MCF2L-205ENST00000397017 RBFOX3A6NFN3 312 aa12.56□□□□□ -0.4
MCF2L-205ENST00000397017 ZNF585BQ52M93 769 aa12.56□□□□□ -0.4
MCF2L-205ENST00000397017 TMUB1Q9BVT8 246 aa12.56□□□□□ -0.4
MCF2L-205ENST00000397017 TMPRSS5Q9H3S3 457 aa12.56□□□□□ -0.4
MCF2L-205ENST00000397017 FBXL15Q9H469 300 aa12.56□□□□□ -0.4
MCF2L-205ENST00000397017 KIR2DS2P43631 304 aa12.56□□□□□ -0.4
MCF2L-205ENST00000397017 B2MP61769 119 aa12.56□□□□□ -0.4
MCF2L-205ENST00000397017 ID3Q02535 119 aa12.56□□□□□ -0.4
MCF2L-205ENST00000397017 KLRD1Q13241 179 aa12.56□□□□□ -0.4
MCF2L-205ENST00000397017 OR4D5Q8NGN0 318 aa12.56□□□□□ -0.4
MCF2L-205ENST00000397017 TAF15Q92804 592 aaKnown RBP eCLIP12.56□□□□□ -0.4
MCF2L-205ENST00000397017 LSM10Q969L4 123 aaKnown RBP12.56□□□□□ -0.4
MCF2L-205ENST00000397017 TVP23CQ96ET8 276 aa12.56□□□□□ -0.4
MCF2L-205ENST00000397017 MBNL3Q9NUK0 354 aaKnown RBP12.56□□□□□ -0.4
MCF2L-205ENST00000397017 METTL1Q9UBP6 276 aaKnown RBP12.56□□□□□ -0.4
MCF2L-205ENST00000397017 ANAPC10Q9UM13 185 aa12.56□□□□□ -0.4
MCF2L-205ENST00000397017 LINC00312Q9Y6C7 94 aa12.56□□□□□ -0.4
MCF2L-205ENST00000397017 ZNF134P52741 427 aa12.55□□□□□ -0.4
MCF2L-205ENST00000397017 SPCS3P61009 180 aa12.55□□□□□ -0.4
MCF2L-205ENST00000397017 TFF3Q07654 80 aa12.55□□□□□ -0.4
MCF2L-205ENST00000397017 OR1L8Q8NGR8 309 aa12.55□□□□□ -0.4
MCF2L-205ENST00000397017 BLNKQ8WV28 456 aa12.55□□□□□ -0.4
MCF2L-205ENST00000397017 ADAMTS20P59510 1910 aa12.55□□□□□ -0.4
MCF2L-205ENST00000397017 TMEM50AO95807 157 aa12.55□□□□□ -0.4
MCF2L-205ENST00000397017 GAPDHP04406 335 aaKnown RBP12.55□□□□□ -0.4
MCF2L-205ENST00000397017 RAB13P51153 203 aa12.55□□□□□ -0.4
MCF2L-205ENST00000397017 NMSQ5H8A3 153 aa12.55□□□□□ -0.4
MCF2L-205ENST00000397017 ZNF788Q6ZQV5 615 aa12.55□□□□□ -0.4
MCF2L-205ENST00000397017 PRNDQ9UKY0 176 aa12.55□□□□□ -0.4
MCF2L-205ENST00000397017 YPEL1O60688 119 aa12.55□□□□□ -0.4
MCF2L-205ENST00000397017 IGKV1-16P04430 117 aa12.55□□□□□ -0.4
MCF2L-205ENST00000397017 HSPE1P61604 102 aaKnown RBP12.55□□□□□ -0.4
MCF2L-205ENST00000397017 SSX8Q7RTT4 187 aa12.55□□□□□ -0.4
MCF2L-205ENST00000397017 OR4P4Q8NGL7 312 aa12.55□□□□□ -0.4
MCF2L-205ENST00000397017 YPEL2Q96QA6 119 aa12.55□□□□□ -0.4
MCF2L-205ENST00000397017 COX7A2P2O60397 106 aa12.54□□□□□ -0.4
MCF2L-205ENST00000397017 C4orf17Q53FE4 359 aa12.54□□□□□ -0.4
MCF2L-205ENST00000397017 ZNF429Q86V71 674 aa12.54□□□□□ -0.4
MCF2L-205ENST00000397017 OR10W1Q8NGF6 305 aa12.54□□□□□ -0.4
MCF2L-205ENST00000397017 IL22RA2Q969J5 263 aa12.54□□□□□ -0.4
MCF2L-205ENST00000397017 CHODLQ9H9P2 273 aa12.54□□□□□ -0.4
MCF2L-205ENST00000397017 IGLV3-9A0A075B6K5 115 aa12.54□□□□□ -0.4
MCF2L-205ENST00000397017 MFSD2BA6NFX1 497 aa12.54□□□□□ -0.4
MCF2L-205ENST00000397017 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms