RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 MZT1Q08AG7 82 aa15.59■□□□□ 0.09
CBX1-202ENST00000393408 OR2Z1Q8NG97 314 aa15.59■□□□□ 0.09
CBX1-202ENST00000393408 IFI27L2Q9H2X8 130 aa15.59■□□□□ 0.09
CBX1-202ENST00000393408 DUSP13Q9UII6 198 aa15.59■□□□□ 0.09
CBX1-202ENST00000393408 PXMP4Q9Y6I8 212 aa15.59■□□□□ 0.09
CBX1-202ENST00000393408 CACNA1GO43497 2377 aa15.59■□□□□ 0.09
CBX1-202ENST00000393408 MGST3O14880 152 aa15.58■□□□□ 0.09
CBX1-202ENST00000393408 ZNF134P52741 427 aa15.58■□□□□ 0.09
CBX1-202ENST00000393408 TRIP6Q15654 476 aaKnown RBP15.58■□□□□ 0.09
CBX1-202ENST00000393408 MIC13Q5XKP0 118 aa15.58■□□□□ 0.09
CBX1-202ENST00000393408 TXNDC17Q9BRA2 123 aa15.58■□□□□ 0.09
CBX1-202ENST00000393408 PGPEP1LA6NFU8 196 aa15.58■□□□□ 0.08
CBX1-202ENST00000393408 PRR33A8MZF0 331 aa15.58■□□□□ 0.08
CBX1-202ENST00000393408 ABHD12Q8N2K0 398 aa15.58■□□□□ 0.08
CBX1-202ENST00000393408 PLSCR4Q9NRQ2 329 aa15.58■□□□□ 0.08
CBX1-202ENST00000393408 F2RL2O00254 374 aa15.57■□□□□ 0.08
CBX1-202ENST00000393408 CNN1P51911 297 aaKnown RBP15.57■□□□□ 0.08
CBX1-202ENST00000393408 FOXL1Q12952 345 aa15.57■□□□□ 0.08
CBX1-202ENST00000393408 ZNF664Q8N3J9 261 aa15.57■□□□□ 0.08
CBX1-202ENST00000393408 TMEM18Q96B42 140 aa15.57■□□□□ 0.08
CBX1-202ENST00000393408 SDSLQ96GA7 329 aa15.57■□□□□ 0.08
CBX1-202ENST00000393408 BTF3L4Q96K17 158 aa15.57■□□□□ 0.08
CBX1-202ENST00000393408 TMEM140Q9NV12 185 aa15.57■□□□□ 0.08
CBX1-202ENST00000393408 TRBV20OR9-2A0A075B6H5 130 aa15.57■□□□□ 0.08
CBX1-202ENST00000393408 A0A0U1RQK1 487 aa15.57■□□□□ 0.08
CBX1-202ENST00000393408 ZNF320A2RRD8 509 aa15.57■□□□□ 0.08
CBX1-202ENST00000393408 CXorf1O96002 111 aa15.57■□□□□ 0.08
CBX1-202ENST00000393408 IGHV3-13P01766 116 aa15.57■□□□□ 0.08
CBX1-202ENST00000393408 IGHV3-7P01780 117 aa15.57■□□□□ 0.08
CBX1-202ENST00000393408 CCL11P51671 97 aa15.57■□□□□ 0.08
CBX1-202ENST00000393408 FDCSPQ8NFU4 85 aa15.57■□□□□ 0.08
CBX1-202ENST00000393408 C1orf159Q96HA4 380 aa15.57■□□□□ 0.08
CBX1-202ENST00000393408 S1PR3Q99500 378 aa15.57■□□□□ 0.08
CBX1-202ENST00000393408 HEATR1Q9H583 2144 aaKnown RBP15.57■□□□□ 0.08
CBX1-202ENST00000393408 TCF19Q9Y242 345 aa15.57■□□□□ 0.08
CBX1-202ENST00000393408 IGHV3OR15-7A0A075B7D8 119 aa15.56■□□□□ 0.08
CBX1-202ENST00000393408 NKX2-8O15522 239 aa15.56■□□□□ 0.08
CBX1-202ENST00000393408 MSMPQ1L6U9 139 aa15.56■□□□□ 0.08
CBX1-202ENST00000393408 C1orf174Q8IYL3 243 aa15.56■□□□□ 0.08
CBX1-202ENST00000393408 PPP1R35Q8TAP8 253 aa15.56■□□□□ 0.08
CBX1-202ENST00000393408 DDB2Q92466 427 aa15.56■□□□□ 0.08
CBX1-202ENST00000393408 SFRP2Q96HF1 295 aa15.56■□□□□ 0.08
CBX1-202ENST00000393408 LSM4Q9Y4Z0 139 aaKnown RBP15.56■□□□□ 0.08
CBX1-202ENST00000393408 PRRC2CQ9Y520 2896 aaKnown RBP15.56■□□□□ 0.08
CBX1-202ENST00000393408 A8MWP6 167 aa15.56■□□□□ 0.08
CBX1-202ENST00000393408 KIR2DS2P43631 304 aa15.56■□□□□ 0.08
CBX1-202ENST00000393408 GCSAMQ8N6F7 178 aa15.56■□□□□ 0.08
CBX1-202ENST00000393408 ZNF71Q9NQZ8 489 aaPredicted RBP15.56■□□□□ 0.08
CBX1-202ENST00000393408 TRGV8A0A0C4DH27 118 aa15.55■□□□□ 0.08
CBX1-202ENST00000393408 CCKARP32238 428 aa15.55■□□□□ 0.08
CBX1-202ENST00000393408 CFHR2P36980 270 aa15.55■□□□□ 0.08
CBX1-202ENST00000393408 C1orf229Q6ZS94 237 aaPredicted RBP15.55■□□□□ 0.08
CBX1-202ENST00000393408 GBGT1Q8N5D6 347 aa15.55■□□□□ 0.08
CBX1-202ENST00000393408 NOL4LQ96MY1 436 aaPredicted RBP15.55■□□□□ 0.08
CBX1-202ENST00000393408 OPN3Q9H1Y3 402 aaPredicted RBP15.55■□□□□ 0.08
CBX1-202ENST00000393408 TRAPPC1Q9Y5R8 145 aa15.55■□□□□ 0.08
CBX1-202ENST00000393408 SCO2A0A1W2PP80 73 aa15.55■□□□□ 0.08
CBX1-202ENST00000393408 SLC31A2O15432 143 aa15.55■□□□□ 0.08
CBX1-202ENST00000393408 LRP11Q86VZ4 500 aa15.55■□□□□ 0.08
CBX1-202ENST00000393408 SGMS2Q8NHU3 365 aa15.55■□□□□ 0.08
CBX1-202ENST00000393408 SARAFQ96BY9 339 aa15.55■□□□□ 0.08
CBX1-202ENST00000393408 ELOVL5Q9NYP7 299 aa15.55■□□□□ 0.08
CBX1-202ENST00000393408 MDFIC2A0A1B0GVS7 189 aa15.54■□□□□ 0.08
CBX1-202ENST00000393408 ZNF705GA8MUZ8 300 aaPredicted RBP15.54■□□□□ 0.08
CBX1-202ENST00000393408 TNFSF13O75888 250 aa15.54■□□□□ 0.08
CBX1-202ENST00000393408 SRSF6Q13247 344 aaKnown RBP15.54■□□□□ 0.08
CBX1-202ENST00000393408 SPRNQ5BIV9 151 aa15.54■□□□□ 0.08
CBX1-202ENST00000393408 UTF1Q5T230 341 aa15.54■□□□□ 0.08
CBX1-202ENST00000393408 ZNRF1Q8ND25 227 aa15.54■□□□□ 0.08
CBX1-202ENST00000393408 TMEM204Q9BSN7 226 aa15.54■□□□□ 0.08
CBX1-202ENST00000393408 NPVFQ9HCQ7 196 aa15.54■□□□□ 0.08
CBX1-202ENST00000393408 CALYQ9NYX4 217 aa15.54■□□□□ 0.08
CBX1-202ENST00000393408 YTHDF2Q9Y5A9 579 aaKnown RBP15.54■□□□□ 0.08
CBX1-202ENST00000393408 INTS1Q8N201 2190 aaKnown RBP15.54■□□□□ 0.08
CBX1-202ENST00000393408 A0A1B0GV90 55 aa15.54■□□□□ 0.08
CBX1-202ENST00000393408 PCNX2A6NKB5 2137 aa15.54■□□□□ 0.08
CBX1-202ENST00000393408 M0R296 226 aa15.54■□□□□ 0.08
CBX1-202ENST00000393408 IL6RP08887 468 aaPredicted RBP15.54■□□□□ 0.08
CBX1-202ENST00000393408 BHLHA15Q7RTS1 189 aaPredicted RBP15.54■□□□□ 0.08
CBX1-202ENST00000393408 OR4S2Q8NH73 311 aa15.54■□□□□ 0.08
CBX1-202ENST00000393408 SSMEM1Q8WWF3 244 aa15.54■□□□□ 0.08
CBX1-202ENST00000393408 C15orf61A6NNL5 157 aa15.53■□□□□ 0.08
CBX1-202ENST00000393408 CGAP01215 116 aa15.53■□□□□ 0.08
CBX1-202ENST00000393408 CGB3P0DN86 165 aa15.53■□□□□ 0.08
CBX1-202ENST00000393408 CGB7P0DN87 165 aa15.53■□□□□ 0.08
CBX1-202ENST00000393408 ARSJQ5FYB0 599 aaPredicted RBP15.53■□□□□ 0.08
CBX1-202ENST00000393408 IGFL2Q6UWQ7 119 aa15.53■□□□□ 0.08
CBX1-202ENST00000393408 STARD4Q96DR4 205 aa15.53■□□□□ 0.08
CBX1-202ENST00000393408 CHODLQ9H9P2 273 aa15.53■□□□□ 0.08
CBX1-202ENST00000393408 SLC25A15Q9Y619 301 aa15.53■□□□□ 0.08
CBX1-202ENST00000393408 MRPL41Q8IXM3 137 aaKnown RBP15.53■□□□□ 0.08
CBX1-202ENST00000393408 FAM169BQ8N8A8 192 aa15.53■□□□□ 0.08
CBX1-202ENST00000393408 PROCRQ9UNN8 238 aa15.53■□□□□ 0.08
CBX1-202ENST00000393408 ITGB1BP1O14713 200 aa15.52■□□□□ 0.08
CBX1-202ENST00000393408 GCHFRP30047 84 aa15.52■□□□□ 0.08
CBX1-202ENST00000393408 TIMP3P35625 211 aa15.52■□□□□ 0.08
CBX1-202ENST00000393408 OCC1Q8TAD7 63 aa15.52■□□□□ 0.08
CBX1-202ENST00000393408 OR2V2Q96R30 315 aa15.52■□□□□ 0.08
CBX1-202ENST00000393408 DKK4Q9UBT3 224 aa15.52■□□□□ 0.08
CBX1-202ENST00000393408 RAB7AP51149 207 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms