RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 A0A1W2PS18 150 aa10.67□□□□□ -0.7
CLTC-202ENST00000393043 HLA-DQA1P01909 254 aa10.67□□□□□ -0.7
CLTC-202ENST00000393043 COX6B1P14854 86 aa10.67□□□□□ -0.7
CLTC-202ENST00000393043 TEX29Q8N6K0 151 aa10.67□□□□□ -0.7
CLTC-202ENST00000393043 METTL26Q96S19 204 aa10.67□□□□□ -0.7
CLTC-202ENST00000393043 CARHSP1Q9Y2V2 147 aaKnown RBP10.67□□□□□ -0.7
CLTC-202ENST00000393043 PROB1E7EW31 1015 aa10.66□□□□□ -0.7
CLTC-202ENST00000393043 SIGLEC5O15389 551 aa10.66□□□□□ -0.7
CLTC-202ENST00000393043 TRGC2P03986 189 aa10.66□□□□□ -0.7
CLTC-202ENST00000393043 RCC1LQ96I51 464 aaKnown RBP10.66□□□□□ -0.7
CLTC-202ENST00000393043 C18orf12Q96KH6 178 aa10.66□□□□□ -0.7
CLTC-202ENST00000393043 SDK2Q58EX2 2172 aa10.66□□□□□ -0.7
CLTC-202ENST00000393043 C17orf98A8MV24 154 aa10.66□□□□□ -0.7
CLTC-202ENST00000393043 M0R143 59 aa10.66□□□□□ -0.7
CLTC-202ENST00000393043 RBPMS2Q6ZRY4 209 aaKnown RBP10.66□□□□□ -0.7
CLTC-202ENST00000393043 A0A087X0M5 115 aa10.66□□□□□ -0.7
CLTC-202ENST00000393043 A0A1B0GX30 115 aa10.66□□□□□ -0.7
CLTC-202ENST00000393043 A8MXK9 166 aa10.66□□□□□ -0.7
CLTC-202ENST00000393043 PPOXP50336 477 aa10.66□□□□□ -0.7
CLTC-202ENST00000393043 RAB9AP51151 201 aa10.66□□□□□ -0.7
CLTC-202ENST00000393043 BSPH1Q075Z2 132 aa10.66□□□□□ -0.7
CLTC-202ENST00000393043 SRSF7Q16629 238 aaKnown RBP eCLIP10.66□□□□□ -0.77e-7■□□□□ 9.4
CLTC-202ENST00000393043 LY6G6FQ5SQ64 297 aa10.66□□□□□ -0.7
CLTC-202ENST00000393043 PNKDQ8N490 385 aa10.66□□□□□ -0.7
CLTC-202ENST00000393043 LINC01560Q8TB33 94 aa10.66□□□□□ -0.7
CLTC-202ENST00000393043 PLPPR1Q8TBJ4 325 aa10.66□□□□□ -0.7
CLTC-202ENST00000393043 NPCDR1Q9BY65 106 aa10.66□□□□□ -0.7
CLTC-202ENST00000393043 PARLQ9H300 379 aa10.66□□□□□ -0.7
CLTC-202ENST00000393043 BET1LQ9NYM9 111 aa10.66□□□□□ -0.7
CLTC-202ENST00000393043 RABAC1Q9UI14 185 aa10.66□□□□□ -0.7
CLTC-202ENST00000393043 CDC42EP3Q9UKI2 254 aa10.66□□□□□ -0.7
CLTC-202ENST00000393043 LINC00312Q9Y6C7 94 aa10.66□□□□□ -0.7
CLTC-202ENST00000393043 ZNF98A6NK75 572 aa10.66□□□□□ -0.7
CLTC-202ENST00000393043 C17orf100A8MU93 164 aa10.66□□□□□ -0.7
CLTC-202ENST00000393043 FOXH1O75593 365 aa10.66□□□□□ -0.7
CLTC-202ENST00000393043 CA2P00918 260 aa10.66□□□□□ -0.7
CLTC-202ENST00000393043 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.66□□□□□ -0.7
CLTC-202ENST00000393043 NEU4Q8WWR8 484 aaPredicted RBP10.66□□□□□ -0.7
CLTC-202ENST00000393043 VENTXO95231 258 aa10.65□□□□□ -0.7
CLTC-202ENST00000393043 TMEM78Q5T7P6 136 aa10.65□□□□□ -0.7
CLTC-202ENST00000393043 SPRR3Q9UBC9 169 aa10.65□□□□□ -0.7
CLTC-202ENST00000393043 TMEM189A5PLL7 270 aa10.65□□□□□ -0.7
CLTC-202ENST00000393043 NPIPB11E5RHQ5 1161 aa10.65□□□□□ -0.7
CLTC-202ENST00000393043 PLAUP00749 431 aa10.65□□□□□ -0.7
CLTC-202ENST00000393043 AGAP20933 346 aa10.65□□□□□ -0.7
CLTC-202ENST00000393043 PDLIM4P50479 330 aa10.65□□□□□ -0.7
CLTC-202ENST00000393043 ZNF497Q6ZNH5 498 aa10.65□□□□□ -0.7
CLTC-202ENST00000393043 LDLRAD4O15165 306 aa10.65□□□□□ -0.7
CLTC-202ENST00000393043 GCHFRP30047 84 aa10.65□□□□□ -0.7
CLTC-202ENST00000393043 ZNF343Q6P1L6 599 aa10.65□□□□□ -0.7
CLTC-202ENST00000393043 FAM216BQ8N7L0 139 aa10.65□□□□□ -0.7
CLTC-202ENST00000393043 NPIPB3Q92617 1050 aa10.65□□□□□ -0.7
CLTC-202ENST00000393043 A0A0A6YYD4 124 aa10.65□□□□□ -0.7
CLTC-202ENST00000393043 YPEL1O60688 119 aa10.65□□□□□ -0.7
CLTC-202ENST00000393043 RPL7P18124 248 aaKnown RBP10.65□□□□□ -0.7
CLTC-202ENST00000393043 PKIAP61925 76 aa10.65□□□□□ -0.7
CLTC-202ENST00000393043 PSG9Q00887 426 aa10.65□□□□□ -0.7
CLTC-202ENST00000393043 RTN4RL2Q86UN3 420 aa10.65□□□□□ -0.7
CLTC-202ENST00000393043 ZCCHC14Q8WYQ9 949 aaKnown RBP10.65□□□□□ -0.7
CLTC-202ENST00000393043 YPEL2Q96QA6 119 aa10.65□□□□□ -0.7
CLTC-202ENST00000393043 RNF126Q9BV68 326 aa10.65□□□□□ -0.7
CLTC-202ENST00000393043 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.64□□□□□ -0.71
CLTC-202ENST00000393043 SLC35B1P78383 322 aa10.64□□□□□ -0.71
CLTC-202ENST00000393043 OR4A47Q6IF82 309 aa10.64□□□□□ -0.71
CLTC-202ENST00000393043 Q6ZN92 141 aa10.64□□□□□ -0.71
CLTC-202ENST00000393043 NLRC5Q86WI3 1866 aa10.64□□□□□ -0.71
CLTC-202ENST00000393043 KIF26BQ2KJY2 2108 aa10.64□□□□□ -0.71
CLTC-202ENST00000393043 PTPRDP23468 1912 aa10.64□□□□□ -0.71
CLTC-202ENST00000393043 SLC25A33Q9BSK2 321 aa10.64□□□□□ -0.71
CLTC-202ENST00000393043 HSPB7Q9UBY9 170 aa10.64□□□□□ -0.71
CLTC-202ENST00000393043 TCF20Q9UGU0 1960 aaKnown RBP10.64□□□□□ -0.71
CLTC-202ENST00000393043 GBF1Q92538 1859 aa10.64□□□□□ -0.71
CLTC-202ENST00000393043 IGKV3-7A0A075B6H7 116 aa10.64□□□□□ -0.71
CLTC-202ENST00000393043 ZNF137PP52743 207 aa10.64□□□□□ -0.71
CLTC-202ENST00000393043 BMPERQ8N8U9 685 aa10.64□□□□□ -0.71
CLTC-202ENST00000393043 ZNF383Q8NA42 475 aa10.64□□□□□ -0.71
CLTC-202ENST00000393043 IFI27L2Q9H2X8 130 aa10.64□□□□□ -0.71
CLTC-202ENST00000393043 TMSB15BA0A087X1C1 80 aa10.64□□□□□ -0.71
CLTC-202ENST00000393043 IL6RP08887 468 aaPredicted RBP10.64□□□□□ -0.71
CLTC-202ENST00000393043 WDR82Q6UXN9 313 aa10.64□□□□□ -0.71
CLTC-202ENST00000393043 TRAV24A0A0B4J272 114 aa10.64□□□□□ -0.71
CLTC-202ENST00000393043 TRAV34A0A0B4J273 112 aa10.64□□□□□ -0.71
CLTC-202ENST00000393043 M0QZK8 103 aa10.64□□□□□ -0.71
CLTC-202ENST00000393043 TCAPO15273 167 aa10.64□□□□□ -0.71
CLTC-202ENST00000393043 GGCTO75223 188 aaKnown RBP10.64□□□□□ -0.71
CLTC-202ENST00000393043 FCGR2BP31994 310 aaPredicted RBP10.64□□□□□ -0.71
CLTC-202ENST00000393043 FXYD3Q14802 87 aa10.64□□□□□ -0.71
CLTC-202ENST00000393043 SPANXN1Q5VSR9 72 aa10.64□□□□□ -0.71
CLTC-202ENST00000393043 FAM166AQ6J272 317 aa10.64□□□□□ -0.71
CLTC-202ENST00000393043 FGFBP3Q8TAT2 258 aa10.64□□□□□ -0.71
CLTC-202ENST00000393043 GUCD1Q96NT3 240 aa10.64□□□□□ -0.71
CLTC-202ENST00000393043 CRYBB3P26998 211 aa10.63□□□□□ -0.71
CLTC-202ENST00000393043 CYP2G1PQ6ZSU1 146 aa10.63□□□□□ -0.71
CLTC-202ENST00000393043 LRTM2Q8N967 370 aa10.63□□□□□ -0.71
CLTC-202ENST00000393043 DPM3Q9P2X0 92 aa10.63□□□□□ -0.71
CLTC-202ENST00000393043 PF4V1P10720 104 aa10.63□□□□□ -0.71
CLTC-202ENST00000393043 G0S2P27469 103 aa10.63□□□□□ -0.71
CLTC-202ENST00000393043 CA7P43166 264 aa10.63□□□□□ -0.71
CLTC-202ENST00000393043 ZNF385CQ66K41 422 aaPredicted RBP10.63□□□□□ -0.71
CLTC-202ENST00000393043 IGKV1D-13A0A0B4J2D9 117 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms