RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 IER3P46695 156 aa14.77□□□□□ -0.05
SQSTM1-202ENST00000389805 TGFBR3Q03167 851 aa14.77□□□□□ -0.05
SQSTM1-202ENST00000389805 OR1L6Q8NGR2 347 aa14.77□□□□□ -0.05
SQSTM1-202ENST00000389805 WIPI2Q9Y4P8 454 aa14.77□□□□□ -0.05
SQSTM1-202ENST00000389805 DIRC3C9JPN6 131 aa14.76□□□□□ -0.05
SQSTM1-202ENST00000389805 CDIPTO14735 213 aa14.76□□□□□ -0.05
SQSTM1-202ENST00000389805 DEGS1O15121 323 aa14.76□□□□□ -0.05
SQSTM1-202ENST00000389805 ZNF816Q0VGE8 651 aaPredicted RBP14.76□□□□□ -0.05
SQSTM1-202ENST00000389805 COTL1Q14019 142 aa14.76□□□□□ -0.05
SQSTM1-202ENST00000389805 RNF151Q2KHN1 245 aa14.76□□□□□ -0.05
SQSTM1-202ENST00000389805 Q6ZN92 141 aa14.76□□□□□ -0.05
SQSTM1-202ENST00000389805 MRPL52Q86TS9 123 aaKnown RBP14.76□□□□□ -0.05
SQSTM1-202ENST00000389805 FDCSPQ8NFU4 85 aa14.76□□□□□ -0.05
SQSTM1-202ENST00000389805 TIMM9Q9Y5J7 89 aa14.76□□□□□ -0.05
SQSTM1-202ENST00000389805 SPAARA0A1B0GVQ0 90 aa14.76□□□□□ -0.05
SQSTM1-202ENST00000389805 FCN1O00602 326 aa14.76□□□□□ -0.05
SQSTM1-202ENST00000389805 ZG16O60844 167 aa14.76□□□□□ -0.05
SQSTM1-202ENST00000389805 RAMP3O60896 148 aa14.76□□□□□ -0.05
SQSTM1-202ENST00000389805 RBMXL2O75526 392 aaKnown RBP14.76□□□□□ -0.05
SQSTM1-202ENST00000389805 EDDM3BP56851 147 aa14.76□□□□□ -0.05
SQSTM1-202ENST00000389805 HLA-DRB5Q30154 266 aa14.76□□□□□ -0.05
SQSTM1-202ENST00000389805 KIAA1644Q3SXP7 199 aa14.76□□□□□ -0.05
SQSTM1-202ENST00000389805 ATOH7Q8N100 152 aa14.76□□□□□ -0.05
SQSTM1-202ENST00000389805 TMEM147Q9BVK8 224 aa14.76□□□□□ -0.05
SQSTM1-202ENST00000389805 OR5B21A6NL26 309 aa14.76□□□□□ -0.05
SQSTM1-202ENST00000389805 WT1P19544 449 aaPredicted RBP14.76□□□□□ -0.05
SQSTM1-202ENST00000389805 KRTCAP3Q53RY4 240 aa14.76□□□□□ -0.05
SQSTM1-202ENST00000389805 CXorf67Q86X51 503 aaPredicted RBP14.76□□□□□ -0.05
SQSTM1-202ENST00000389805 SIGLECL1Q8N7X8 197 aa14.76□□□□□ -0.05
SQSTM1-202ENST00000389805 SCCPDHQ8NBX0 429 aa14.76□□□□□ -0.05
SQSTM1-202ENST00000389805 OR10P1Q8NGE3 313 aa14.76□□□□□ -0.05
SQSTM1-202ENST00000389805 WNT10AQ9GZT5 417 aa14.76□□□□□ -0.05
SQSTM1-202ENST00000389805 GRPP07492 148 aa14.75□□□□□ -0.05
SQSTM1-202ENST00000389805 CEACAM8P31997 349 aaPredicted RBP14.75□□□□□ -0.05
SQSTM1-202ENST00000389805 CEBPDP49716 269 aaPredicted RBP14.75□□□□□ -0.05
SQSTM1-202ENST00000389805 OCC1Q8TAD7 63 aa14.75□□□□□ -0.05
SQSTM1-202ENST00000389805 TRIB1Q96RU8 372 aa14.75□□□□□ -0.05
SQSTM1-202ENST00000389805 RIF1Q5UIP0 2472 aaKnown RBP14.75□□□□□ -0.05
SQSTM1-202ENST00000389805 AGFG2O95081 481 aa14.75□□□□□ -0.05
SQSTM1-202ENST00000389805 PMCHP20382 165 aa14.75□□□□□ -0.05
SQSTM1-202ENST00000389805 HINT1P49773 126 aaPredicted RBP14.75□□□□□ -0.05
SQSTM1-202ENST00000389805 YPEL3P61236 119 aaPredicted RBP14.75□□□□□ -0.05
SQSTM1-202ENST00000389805 SUMO1P63165 101 aaKnown RBP14.75□□□□□ -0.05
SQSTM1-202ENST00000389805 TBC1D28Q2M2D7 210 aa14.75□□□□□ -0.05
SQSTM1-202ENST00000389805 FAM53AQ6NSI3 398 aaPredicted RBP14.75□□□□□ -0.05
SQSTM1-202ENST00000389805 Q6P435 159 aa14.75□□□□□ -0.05
SQSTM1-202ENST00000389805 UNQ5815/PRO19632Q6UWF5 114 aa14.75□□□□□ -0.05
SQSTM1-202ENST00000389805 CNEP1R1Q8N9A8 125 aa14.75□□□□□ -0.05
SQSTM1-202ENST00000389805 DEFB124Q8NES8 71 aa14.75□□□□□ -0.05
SQSTM1-202ENST00000389805 OR10G8Q8NGN5 311 aa14.75□□□□□ -0.05
SQSTM1-202ENST00000389805 C22orf15Q8WYQ4 148 aa14.75□□□□□ -0.05
SQSTM1-202ENST00000389805 SMPD2O60906 423 aa14.74□□□□□ -0.05
SQSTM1-202ENST00000389805 TFF1P04155 84 aa14.74□□□□□ -0.05
SQSTM1-202ENST00000389805 TMEM178AQ8NBL3 297 aa14.74□□□□□ -0.05
SQSTM1-202ENST00000389805 SLC25A40Q8TBP6 338 aa14.74□□□□□ -0.05
SQSTM1-202ENST00000389805 NANOS1Q8WY41 292 aaKnown RBP14.74□□□□□ -0.05
SQSTM1-202ENST00000389805 SCO2A0A1W2PP80 73 aa14.74□□□□□ -0.05
SQSTM1-202ENST00000389805 SNURFLB1AK76 121 aa14.74□□□□□ -0.05
SQSTM1-202ENST00000389805 SRSF7Q16629 238 aaKnown RBP eCLIP14.74□□□□□ -0.054e-8■□□□□ 9.2
SQSTM1-202ENST00000389805 STARD4Q96DR4 205 aa14.74□□□□□ -0.05
SQSTM1-202ENST00000389805 LRFN3Q9BTN0 628 aa14.74□□□□□ -0.05
SQSTM1-202ENST00000389805 PARD6GQ9BYG4 376 aaPredicted RBP14.74□□□□□ -0.05
SQSTM1-202ENST00000389805 OR2H2O95918 312 aa14.73□□□□□ -0.05
SQSTM1-202ENST00000389805 SLC35B1P78383 322 aa14.73□□□□□ -0.05
SQSTM1-202ENST00000389805 LEMD1Q68G75 181 aa14.73□□□□□ -0.05
SQSTM1-202ENST00000389805 ERASQ7Z444 233 aa14.73□□□□□ -0.05
SQSTM1-202ENST00000389805 ZNF808Q8N4W9 903 aaPredicted RBP14.73□□□□□ -0.05
SQSTM1-202ENST00000389805 TBL2Q9Y4P3 447 aaKnown RBP14.73□□□□□ -0.05
SQSTM1-202ENST00000389805 J3QT63 122 aa14.73□□□□□ -0.05
SQSTM1-202ENST00000389805 HNRNPA3P51991 378 aaKnown RBP14.73□□□□□ -0.05
SQSTM1-202ENST00000389805 SELENOTP62341 195 aa14.73□□□□□ -0.05
SQSTM1-202ENST00000389805 FZR1Q9UM11 496 aa14.73□□□□□ -0.05
SQSTM1-202ENST00000389805 PDE6DO43924 150 aa14.73□□□□□ -0.05
SQSTM1-202ENST00000389805 CD99P14209 185 aa14.73□□□□□ -0.05
SQSTM1-202ENST00000389805 MPV17P39210 176 aa14.73□□□□□ -0.05
SQSTM1-202ENST00000389805 AMTP48728 403 aa14.73□□□□□ -0.05
SQSTM1-202ENST00000389805 PSG7Q13046 419 aa14.73□□□□□ -0.05
SQSTM1-202ENST00000389805 ALKBH2Q6NS38 261 aa14.73□□□□□ -0.05
SQSTM1-202ENST00000389805 DRAM1Q8N682 238 aa14.73□□□□□ -0.05
SQSTM1-202ENST00000389805 GMPPAQ96IJ6 420 aaPredicted RBP14.73□□□□□ -0.05
SQSTM1-202ENST00000389805 LIN7CQ9NUP9 197 aaKnown RBP14.73□□□□□ -0.05
SQSTM1-202ENST00000389805 LAMTOR2Q9Y2Q5 125 aa14.73□□□□□ -0.05
SQSTM1-202ENST00000389805 A0A1W2PPV4 95 aa14.72□□□□□ -0.05
SQSTM1-202ENST00000389805 TIMP3P35625 211 aa14.72□□□□□ -0.05
SQSTM1-202ENST00000389805 MAJINQ3KP22 176 aa14.72□□□□□ -0.05
SQSTM1-202ENST00000389805 ZNF826PQ6ZT77 177 aa14.72□□□□□ -0.05
SQSTM1-202ENST00000389805 DCHS1Q96JQ0 3298 aa14.72□□□□□ -0.05
SQSTM1-202ENST00000389805 TMPRSS2O15393 492 aa14.72□□□□□ -0.05
SQSTM1-202ENST00000389805 HYPMO75409 117 aa14.72□□□□□ -0.05
SQSTM1-202ENST00000389805 VWA1Q6PCB0 445 aa14.72□□□□□ -0.05
SQSTM1-202ENST00000389805 Q8N976 141 aa14.72□□□□□ -0.05
SQSTM1-202ENST00000389805 OR4B1Q8NGF8 309 aa14.72□□□□□ -0.05
SQSTM1-202ENST00000389805 RTL8AQ9BWD3 113 aa14.72□□□□□ -0.05
SQSTM1-202ENST00000389805 PKIBQ9C010 78 aa14.72□□□□□ -0.05
SQSTM1-202ENST00000389805 GNB4Q9HAV0 340 aa14.72□□□□□ -0.05
SQSTM1-202ENST00000389805 TRAPPC2LQ9UL33 140 aa14.72□□□□□ -0.05
SQSTM1-202ENST00000389805 ZNF586Q9NXT0 402 aa14.71□□□□□ -0.05
SQSTM1-202ENST00000389805 ODAMA1E959 279 aa14.71□□□□□ -0.05
SQSTM1-202ENST00000389805 WNT9BO14905 357 aa14.71□□□□□ -0.05
SQSTM1-202ENST00000389805 NXPH2O95156 264 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms