RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 SELENOTP62341 195 aa12.03□□□□□ -0.48
TRIM13-202ENST00000378182 ZNF383Q8NA42 475 aa12.03□□□□□ -0.48
TRIM13-202ENST00000378182 SPSB4Q96A44 273 aa12.03□□□□□ -0.48
TRIM13-202ENST00000378182 APC2O95996 2303 aa12.03□□□□□ -0.48
TRIM13-202ENST00000378182 RBBP6Q7Z6E9 1792 aaKnown RBP12.03□□□□□ -0.48
TRIM13-202ENST00000378182 NANOS3P60323 173 aaKnown RBP12.03□□□□□ -0.48
TRIM13-202ENST00000378182 HOGA1Q86XE5 327 aa12.03□□□□□ -0.48
TRIM13-202ENST00000378182 TRGV4A0A0C4DH28 118 aa12.02□□□□□ -0.48
TRIM13-202ENST00000378182 TRBV7-9A0A0J9YWB2 115 aa12.02□□□□□ -0.48
TRIM13-202ENST00000378182 ZNF324BQ6AW86 544 aaPredicted RBP12.02□□□□□ -0.48
TRIM13-202ENST00000378182 ZCCHC24Q8N2G6 241 aaKnown RBP12.02□□□□□ -0.49
TRIM13-202ENST00000378182 DEFB104AQ8WTQ1 72 aa12.02□□□□□ -0.49
TRIM13-202ENST00000378182 A0A0G2JMM0 328 aa12.02□□□□□ -0.49
TRIM13-202ENST00000378182 A0A1W2PPB8 328 aa12.02□□□□□ -0.49
TRIM13-202ENST00000378182 A0A1W2PRS3 328 aa12.02□□□□□ -0.49
TRIM13-202ENST00000378182 MARCH11A6NNE9 402 aa12.02□□□□□ -0.49
TRIM13-202ENST00000378182 KIR3DP1A8MWS1 328 aa12.02□□□□□ -0.49
TRIM13-202ENST00000378182 KIAA1644Q3SXP7 199 aa12.02□□□□□ -0.49
TRIM13-202ENST00000378182 C3orf56Q8N813 242 aa12.02□□□□□ -0.49
TRIM13-202ENST00000378182 CYB561D1Q8N8Q1 229 aa12.02□□□□□ -0.49
TRIM13-202ENST00000378182 ZNF703Q9H7S9 590 aaPredicted RBP12.02□□□□□ -0.49
TRIM13-202ENST00000378182 OR5AC2Q9NZP5 309 aa12.02□□□□□ -0.49
TRIM13-202ENST00000378182 LINC00527Q9UJ94 153 aa12.02□□□□□ -0.49
TRIM13-202ENST00000378182 IGKV1-8A0A0C4DH67 115 aa12.02□□□□□ -0.49
TRIM13-202ENST00000378182 HSPB9Q9BQS6 159 aa12.02□□□□□ -0.49
TRIM13-202ENST00000378182 A0A0G2JLM5 398 aa12.02□□□□□ -0.49
TRIM13-202ENST00000378182 HOXA6P31267 233 aa12.02□□□□□ -0.49
TRIM13-202ENST00000378182 RPS11P62280 158 aaKnown RBP eCLIP12.02□□□□□ -0.49
TRIM13-202ENST00000378182 TMEM42Q69YG0 159 aa12.02□□□□□ -0.49
TRIM13-202ENST00000378182 HEATR1Q9H583 2144 aaKnown RBP12.02□□□□□ -0.49
TRIM13-202ENST00000378182 TRAV12-3A0A0B4J271 114 aa12.01□□□□□ -0.49
TRIM13-202ENST00000378182 BIVMQ86UB2 503 aa12.01□□□□□ -0.49
TRIM13-202ENST00000378182 FAM89BQ8N5H3 189 aa12.01□□□□□ -0.49
TRIM13-202ENST00000378182 TMEM186Q96B77 213 aa12.01□□□□□ -0.49
TRIM13-202ENST00000378182 H0YL77 283 aa12.01□□□□□ -0.49
TRIM13-202ENST00000378182 NDUFA3O95167 84 aa12.01□□□□□ -0.49
TRIM13-202ENST00000378182 SURF2Q15527 256 aaPredicted RBP12.01□□□□□ -0.49
TRIM13-202ENST00000378182 OR11H7Q8NGC8 314 aa12.01□□□□□ -0.49
TRIM13-202ENST00000378182 SFRP2Q96HF1 295 aa12.01□□□□□ -0.49
TRIM13-202ENST00000378182 NXT2Q9NPJ8 142 aaKnown RBP12.01□□□□□ -0.49
TRIM13-202ENST00000378182 FOXD3Q9UJU5 478 aaPredicted RBP12.01□□□□□ -0.49
TRIM13-202ENST00000378182 HKR1P10072 659 aa12.01□□□□□ -0.49
TRIM13-202ENST00000378182 ASIPP42127 132 aa12.01□□□□□ -0.49
TRIM13-202ENST00000378182 DLEC1Q9Y238 1755 aa12.01□□□□□ -0.49
TRIM13-202ENST00000378182 FXYD7P58549 80 aa12.01□□□□□ -0.49
TRIM13-202ENST00000378182 TMEM105Q8N8V8 129 aa12.01□□□□□ -0.49
TRIM13-202ENST00000378182 FAM57AQ8TBR7 257 aa12.01□□□□□ -0.49
TRIM13-202ENST00000378182 TRAV40A0A0B4J280 105 aa12.01□□□□□ -0.49
TRIM13-202ENST00000378182 GAGE10A6NGK3 116 aa12.01□□□□□ -0.49
TRIM13-202ENST00000378182 CD7P09564 240 aa12.01□□□□□ -0.49
TRIM13-202ENST00000378182 C1QTNF12Q5T7M4 302 aa12.01□□□□□ -0.49
TRIM13-202ENST00000378182 RNASEH2CQ8TDP1 164 aaKnown RBP12.01□□□□□ -0.49
TRIM13-202ENST00000378182 GNLYP22749 145 aa12□□□□□ -0.49
TRIM13-202ENST00000378182 SP7Q8TDD2 431 aaPredicted RBP12□□□□□ -0.49
TRIM13-202ENST00000378182 RAB24Q969Q5 203 aa12□□□□□ -0.49
TRIM13-202ENST00000378182 PARLQ9H300 379 aa12□□□□□ -0.49
TRIM13-202ENST00000378182 PSME4Q14997 1843 aa12□□□□□ -0.49
TRIM13-202ENST00000378182 SELENOHQ8IZQ5 122 aaKnown RBP12□□□□□ -0.49
TRIM13-202ENST00000378182 CLDND2Q8NHS1 167 aa12□□□□□ -0.49
TRIM13-202ENST00000378182 MRPL18Q9H0U6 180 aaKnown RBP12□□□□□ -0.49
TRIM13-202ENST00000378182 CDK2AP2O75956 126 aa12□□□□□ -0.49
TRIM13-202ENST00000378182 CELA3BP08861 270 aa12□□□□□ -0.49
TRIM13-202ENST00000378182 ASAH2BP0C7U1 165 aa12□□□□□ -0.49
TRIM13-202ENST00000378182 GPR146Q96CH1 333 aa12□□□□□ -0.49
TRIM13-202ENST00000378182 SDF2L1Q9HCN8 221 aa12□□□□□ -0.49
TRIM13-202ENST00000378182 SIGLEC5O15389 551 aa12□□□□□ -0.49
TRIM13-202ENST00000378182 CNTFRP26992 372 aa12□□□□□ -0.49
TRIM13-202ENST00000378182 RPS20P60866 119 aaKnown RBP12□□□□□ -0.49
TRIM13-202ENST00000378182 PRSS22Q9GZN4 317 aa12□□□□□ -0.49
TRIM13-202ENST00000378182 CYB5R1Q9UHQ9 305 aa12□□□□□ -0.49
TRIM13-202ENST00000378182 FANCMQ8IYD8 2048 aa12□□□□□ -0.49
TRIM13-202ENST00000378182 TRAV24A0A0B4J272 114 aa11.99□□□□□ -0.49
TRIM13-202ENST00000378182 DRAM1Q8N682 238 aa11.99□□□□□ -0.49
TRIM13-202ENST00000378182 OR5AN1Q8NGI8 311 aa11.99□□□□□ -0.49
TRIM13-202ENST00000378182 TCF21O43680 179 aa11.99□□□□□ -0.49
TRIM13-202ENST00000378182 EFEMP2O95967 443 aa11.99□□□□□ -0.49
TRIM13-202ENST00000378182 ZNF585BQ52M93 769 aa11.99□□□□□ -0.49
TRIM13-202ENST00000378182 SLC25A47Q6Q0C1 308 aa11.99□□□□□ -0.49
TRIM13-202ENST00000378182 SSC4DQ8WTU2 575 aa11.99□□□□□ -0.49
TRIM13-202ENST00000378182 WFIKKN1Q96NZ8 548 aa11.99□□□□□ -0.49
TRIM13-202ENST00000378182 GGCTO75223 188 aaKnown RBP11.99□□□□□ -0.49
TRIM13-202ENST00000378182 KLK2P20151 261 aa11.99□□□□□ -0.49
TRIM13-202ENST00000378182 ZNF729A6NN14 1252 aaPredicted RBP11.99□□□□□ -0.49
TRIM13-202ENST00000378182 CTDSPLO15194 276 aa11.99□□□□□ -0.49
TRIM13-202ENST00000378182 TIMM23BQ5SRD1 257 aa11.99□□□□□ -0.49
TRIM13-202ENST00000378182 GFI1BQ5VTD9 330 aa11.99□□□□□ -0.49
TRIM13-202ENST00000378182 SLC25A28Q96A46 364 aa11.99□□□□□ -0.49
TRIM13-202ENST00000378182 JOSD1Q15040 202 aaPredicted RBP11.99□□□□□ -0.49
TRIM13-202ENST00000378182 TTC32Q5I0X7 151 aa11.99□□□□□ -0.49
TRIM13-202ENST00000378182 Q6ZT83 130 aa11.99□□□□□ -0.49
TRIM13-202ENST00000378182 SPACA3Q8IXA5 215 aa11.99□□□□□ -0.49
TRIM13-202ENST00000378182 FAM216BQ8N7L0 139 aa11.99□□□□□ -0.49
TRIM13-202ENST00000378182 TMEM167AQ8TBQ9 72 aa11.99□□□□□ -0.49
TRIM13-202ENST00000378182 CECR9P0C854 216 aa11.98□□□□□ -0.49
TRIM13-202ENST00000378182 ERVK11-1P61568 191 aa11.98□□□□□ -0.49
TRIM13-202ENST00000378182 SH3BGRL3Q9H299 93 aa11.98□□□□□ -0.49
TRIM13-202ENST00000378182 ELF5Q9UKW6 265 aaPredicted RBP11.98□□□□□ -0.49
TRIM13-202ENST00000378182 HMSDA8MTL9 139 aa11.98□□□□□ -0.49
TRIM13-202ENST00000378182 CDS2O95674 445 aa11.98□□□□□ -0.49
TRIM13-202ENST00000378182 IGHV3-73A0A0B4J1V6 119 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms