RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 GCH1P30793 250 aa16.84■□□□□ 0.29
CLN5-201ENST00000377453 MORN2Q502X0 79 aa16.84■□□□□ 0.29
CLN5-201ENST00000377453 TGIF2LYQ8IUE0 185 aa16.84■□□□□ 0.29
CLN5-201ENST00000377453 OR4A8P0C604 315 aa16.84■□□□□ 0.29
CLN5-201ENST00000377453 CD33P20138 364 aa16.84■□□□□ 0.29
CLN5-201ENST00000377453 REC114Q7Z4M0 266 aa16.84■□□□□ 0.29
CLN5-201ENST00000377453 C1orf159Q96HA4 380 aa16.84■□□□□ 0.29
CLN5-201ENST00000377453 LURAP1Q96LR2 239 aa16.84■□□□□ 0.29
CLN5-201ENST00000377453 FOXH1O75593 365 aa16.83■□□□□ 0.29
CLN5-201ENST00000377453 NDUFB7P17568 137 aa16.83■□□□□ 0.29
CLN5-201ENST00000377453 PRR7Q8TB68 274 aa16.83■□□□□ 0.29
CLN5-201ENST00000377453 ANAPC16Q96DE5 110 aa16.83■□□□□ 0.29
CLN5-201ENST00000377453 PXMP4Q9Y6I8 212 aa16.83■□□□□ 0.29
CLN5-201ENST00000377453 RIF1Q5UIP0 2472 aaKnown RBP16.83■□□□□ 0.29
CLN5-201ENST00000377453 RP1L1Q8IWN7 2480 aaPredicted RBP16.83■□□□□ 0.29
CLN5-201ENST00000377453 GGTLC1Q9BX51 225 aa16.83■□□□□ 0.28
CLN5-201ENST00000377453 HINT2Q9BX68 163 aa16.83■□□□□ 0.28
CLN5-201ENST00000377453 ZNRD1Q9P1U0 126 aa16.83■□□□□ 0.28
CLN5-201ENST00000377453 YTHDF2Q9Y5A9 579 aaKnown RBP16.83■□□□□ 0.28
CLN5-201ENST00000377453 SSX2Q16385 188 aa16.83■□□□□ 0.28
CLN5-201ENST00000377453 ZNF718Q3SXZ3 478 aa16.83■□□□□ 0.28
CLN5-201ENST00000377453 TMEM140Q9NV12 185 aa16.83■□□□□ 0.28
CLN5-201ENST00000377453 FRMD6-AS1P0C7T7 363 aa16.82■□□□□ 0.28
CLN5-201ENST00000377453 ZNF83P51522 516 aa16.82■□□□□ 0.28
CLN5-201ENST00000377453 GUSBP1Q15486 140 aa16.82■□□□□ 0.28
CLN5-201ENST00000377453 PDLIM3Q53GG5 364 aaPredicted RBP16.82■□□□□ 0.28
CLN5-201ENST00000377453 MRPL41Q8IXM3 137 aaKnown RBP16.82■□□□□ 0.28
CLN5-201ENST00000377453 OR5R1Q8NH85 324 aa16.82■□□□□ 0.28
CLN5-201ENST00000377453 GRIFINA4D1Z8 144 aa16.82■□□□□ 0.28
CLN5-201ENST00000377453 DVL1O14640 695 aa16.82■□□□□ 0.28
CLN5-201ENST00000377453 GFRA3O60609 400 aa16.82■□□□□ 0.28
CLN5-201ENST00000377453 VDAC2P45880 294 aaPredicted RBP16.82■□□□□ 0.28
CLN5-201ENST00000377453 RELBQ01201 579 aa16.82■□□□□ 0.28
CLN5-201ENST00000377453 MOGAT3Q86VF5 341 aa16.82■□□□□ 0.28
CLN5-201ENST00000377453 SGMS2Q8NHU3 365 aa16.82■□□□□ 0.28
CLN5-201ENST00000377453 IMMP2LQ96T52 175 aa16.82■□□□□ 0.28
CLN5-201ENST00000377453 IFI27L2Q9H2X8 130 aa16.82■□□□□ 0.28
CLN5-201ENST00000377453 SEPSECSQ9HD40 501 aaKnown RBP16.82■□□□□ 0.28
CLN5-201ENST00000377453 MOB3BQ86TA1 216 aa16.81■□□□□ 0.28
CLN5-201ENST00000377453 MISP3Q96FF7 219 aa16.81■□□□□ 0.28
CLN5-201ENST00000377453 OTOGLQ3ZCN5 2332 aa16.81■□□□□ 0.28
CLN5-201ENST00000377453 SLC17A3O00476 420 aa16.81■□□□□ 0.28
CLN5-201ENST00000377453 SPRY3O43610 288 aa16.81■□□□□ 0.28
CLN5-201ENST00000377453 KITLGP21583 273 aa16.81■□□□□ 0.28
CLN5-201ENST00000377453 HLA-DRB5Q30154 266 aa16.81■□□□□ 0.28
CLN5-201ENST00000377453 FAM90A1Q86YD7 464 aa16.81■□□□□ 0.28
CLN5-201ENST00000377453 GCSAMQ8N6F7 178 aa16.81■□□□□ 0.28
CLN5-201ENST00000377453 TRAPPC1Q9Y5R8 145 aa16.81■□□□□ 0.28
CLN5-201ENST00000377453 HPRT1P00492 218 aa16.8■□□□□ 0.28
CLN5-201ENST00000377453 LOXL3P58215 753 aa16.8■□□□□ 0.28
CLN5-201ENST00000377453 TCF19Q9Y242 345 aa16.8■□□□□ 0.28
CLN5-201ENST00000377453 PRSS46E5RG02 174 aa16.8■□□□□ 0.28
CLN5-201ENST00000377453 ACTL6BO94805 426 aa16.8■□□□□ 0.28
CLN5-201ENST00000377453 SPCS3P61009 180 aa16.8■□□□□ 0.28
CLN5-201ENST00000377453 RPL15P61313 204 aaKnown RBP16.8■□□□□ 0.28
CLN5-201ENST00000377453 ARSJQ5FYB0 599 aaPredicted RBP16.8■□□□□ 0.28
CLN5-201ENST00000377453 PLA2G2CQ5R387 149 aa16.8■□□□□ 0.28
CLN5-201ENST00000377453 DIRC2Q96SL1 478 aa16.8■□□□□ 0.28
CLN5-201ENST00000377453 MGAQ8IWI9 3026 aa16.8■□□□□ 0.28
CLN5-201ENST00000377453 SRP14P37108 136 aaKnown RBP16.79■□□□□ 0.28
CLN5-201ENST00000377453 CNN1P51911 297 aaKnown RBP16.79■□□□□ 0.28
CLN5-201ENST00000377453 COA6Q5JTJ3 125 aaKnown RBP16.79■□□□□ 0.28
CLN5-201ENST00000377453 RPRMLQ8N4K4 120 aa16.79■□□□□ 0.28
CLN5-201ENST00000377453 DEFB108BQ8NET1 73 aa16.79■□□□□ 0.28
CLN5-201ENST00000377453 OCC1Q8TAD7 63 aa16.79■□□□□ 0.28
CLN5-201ENST00000377453 OR2V2Q96R30 315 aa16.79■□□□□ 0.28
CLN5-201ENST00000377453 ZFHX2Q9C0A1 2572 aaPredicted RBP16.79■□□□□ 0.28
CLN5-201ENST00000377453 F6UZH7 168 aa16.79■□□□□ 0.28
CLN5-201ENST00000377453 VENTXO95231 258 aa16.79■□□□□ 0.28
CLN5-201ENST00000377453 ADH4P08319 380 aa16.79■□□□□ 0.28
CLN5-201ENST00000377453 HTD2P86397 168 aa16.79■□□□□ 0.28
CLN5-201ENST00000377453 KCNIP4Q6PIL6 250 aa16.79■□□□□ 0.28
CLN5-201ENST00000377453 RNASEH2CQ8TDP1 164 aaKnown RBP16.79■□□□□ 0.28
CLN5-201ENST00000377453 SFRP2Q96HF1 295 aa16.79■□□□□ 0.28
CLN5-201ENST00000377453 S1PR3Q99500 378 aa16.79■□□□□ 0.28
CLN5-201ENST00000377453 AHRRA9YTQ3 701 aa16.78■□□□□ 0.28
CLN5-201ENST00000377453 GNG10P50151 68 aa16.78■□□□□ 0.28
CLN5-201ENST00000377453 ASPHD1Q5U4P2 390 aa16.78■□□□□ 0.28
CLN5-201ENST00000377453 CISD2Q8N5K1 135 aaKnown RBP16.78■□□□□ 0.28
CLN5-201ENST00000377453 SNRNP40Q96DI7 357 aaKnown RBP16.78■□□□□ 0.28
CLN5-201ENST00000377453 MAP1BP46821 2468 aaKnown RBP16.78■□□□□ 0.28
CLN5-201ENST00000377453 A8MWP6 167 aa16.78■□□□□ 0.28
CLN5-201ENST00000377453 ERVK-16P61578 105 aa16.78■□□□□ 0.28
CLN5-201ENST00000377453 KCNIP2Q9NS61 270 aa16.78■□□□□ 0.28
CLN5-201ENST00000377453 ARFGEF3Q5TH69 2177 aa16.78■□□□□ 0.28
CLN5-201ENST00000377453 TNCP24821 2201 aa16.78■□□□□ 0.28
CLN5-201ENST00000377453 PDE6DO43924 150 aa16.77■□□□□ 0.28
CLN5-201ENST00000377453 IGHG3P01860 377 aa16.77■□□□□ 0.28
CLN5-201ENST00000377453 IL6RP08887 468 aaPredicted RBP16.77■□□□□ 0.28
CLN5-201ENST00000377453 CBLN1P23435 193 aa16.77■□□□□ 0.28
CLN5-201ENST00000377453 ADMP35318 185 aa16.77■□□□□ 0.28
CLN5-201ENST00000377453 PDLIM4P50479 330 aa16.77■□□□□ 0.28
CLN5-201ENST00000377453 ACY3Q96HD9 319 aa16.77■□□□□ 0.28
CLN5-201ENST00000377453 SPTBN2O15020 2390 aa16.77■□□□□ 0.27
CLN5-201ENST00000377453 CACNA1GO43497 2377 aa16.77■□□□□ 0.27
CLN5-201ENST00000377453 SRRM5B3KS81 715 aa16.77■□□□□ 0.27
CLN5-201ENST00000377453 M0R1B8 84 aa16.77■□□□□ 0.27
CLN5-201ENST00000377453 TNFSF13O75888 250 aa16.77■□□□□ 0.27
CLN5-201ENST00000377453 TYMSP04818 313 aa16.77■□□□□ 0.27
CLN5-201ENST00000377453 STAG3L2P0CL84 134 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms