RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 IGLV3-12A0A075B6K2 115 aa11.54□□□□□ -0.56
GPC6-201ENST00000377047 C12orf77C9JDV5 145 aa11.54□□□□□ -0.56
GPC6-201ENST00000377047 TMEM177Q53S58 311 aa11.54□□□□□ -0.56
GPC6-201ENST00000377047 C1QL2Q7Z5L3 287 aa11.54□□□□□ -0.56
GPC6-201ENST00000377047 STPG2Q8N412 459 aa11.54□□□□□ -0.56
GPC6-201ENST00000377047 CHAC2Q8WUX2 184 aa11.54□□□□□ -0.56
GPC6-201ENST00000377047 SPRR3Q9UBC9 169 aa11.54□□□□□ -0.56
GPC6-201ENST00000377047 FBXL7Q9UJT9 491 aa11.54□□□□□ -0.56
GPC6-201ENST00000377047 CXCL2P19875 107 aa11.54□□□□□ -0.56
GPC6-201ENST00000377047 ITLN2Q8WWU7 325 aaPredicted RBP11.54□□□□□ -0.56
GPC6-201ENST00000377047 C1QTNF5Q9BXJ0 243 aa11.54□□□□□ -0.56
GPC6-201ENST00000377047 PTPRFP10586 1907 aa11.53□□□□□ -0.56
GPC6-201ENST00000377047 C1QL1O75973 258 aa11.53□□□□□ -0.56
GPC6-201ENST00000377047 ACAA1P09110 424 aaPredicted RBP11.53□□□□□ -0.56
GPC6-201ENST00000377047 ZNF56Q15929 161 aa11.53□□□□□ -0.56
GPC6-201ENST00000377047 OR13A1Q8NGR1 328 aa11.53□□□□□ -0.56
GPC6-201ENST00000377047 GALNT14Q96FL9 552 aa11.53□□□□□ -0.56
GPC6-201ENST00000377047 DEPPQ9NTK1 212 aa11.53□□□□□ -0.56
GPC6-201ENST00000377047 LOC102723996A0A087X1L8 192 aa11.53□□□□□ -0.56
GPC6-201ENST00000377047 CA2P00918 260 aa11.53□□□□□ -0.56
GPC6-201ENST00000377047 AMY1AP04745 511 aa11.53□□□□□ -0.56
GPC6-201ENST00000377047 SULT1A2P50226 295 aa11.53□□□□□ -0.56
GPC6-201ENST00000377047 TMEM187Q14656 261 aa11.53□□□□□ -0.56
GPC6-201ENST00000377047 ZNF236Q9UL36 1845 aa11.53□□□□□ -0.56
GPC6-201ENST00000377047 SIAH2O43255 324 aa11.53□□□□□ -0.56
GPC6-201ENST00000377047 BET1LQ9NYM9 111 aa11.53□□□□□ -0.56
GPC6-201ENST00000377047 FOXI3A8MTJ6 420 aaPredicted RBP11.53□□□□□ -0.56
GPC6-201ENST00000377047 GCSHP23434 173 aa11.53□□□□□ -0.56
GPC6-201ENST00000377047 NRN1LQ496H8 165 aa11.53□□□□□ -0.56
GPC6-201ENST00000377047 ABCA7Q8IZY2 2146 aa11.52□□□□□ -0.56
GPC6-201ENST00000377047 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.52□□□□□ -0.56
GPC6-201ENST00000377047 C7orf66A4D0T2 115 aa11.52□□□□□ -0.56
GPC6-201ENST00000377047 IQCF6A8MYZ5 107 aa11.52□□□□□ -0.56
GPC6-201ENST00000377047 NPIPB9F8W1W9 429 aa11.52□□□□□ -0.56
GPC6-201ENST00000377047 NUDT3O95989 172 aa11.52□□□□□ -0.56
GPC6-201ENST00000377047 CSRP3P50461 194 aa11.52□□□□□ -0.56
GPC6-201ENST00000377047 SRSF12Q8WXF0 261 aaKnown RBP11.52□□□□□ -0.56
GPC6-201ENST00000377047 ARPC1AQ92747 370 aa11.52□□□□□ -0.56
GPC6-201ENST00000377047 RALGAPA2Q2PPJ7 1873 aa11.52□□□□□ -0.56
GPC6-201ENST00000377047 KBTBD11-OT1A0A1B0GTJ5 212 aa11.52□□□□□ -0.57
GPC6-201ENST00000377047 PINLYPA6NC86 204 aa11.52□□□□□ -0.57
GPC6-201ENST00000377047 C2orf83Q53S99 150 aa11.52□□□□□ -0.57
GPC6-201ENST00000377047 CD200R1LQ6Q8B3 271 aa11.52□□□□□ -0.57
GPC6-201ENST00000377047 A0A0G2JLM5 398 aa11.52□□□□□ -0.57
GPC6-201ENST00000377047 NTN3O00634 580 aaPredicted RBP11.52□□□□□ -0.57
GPC6-201ENST00000377047 DLX6P56179 175 aa11.52□□□□□ -0.57
GPC6-201ENST00000377047 FAM159AQ6UWV7 190 aa11.52□□□□□ -0.57
GPC6-201ENST00000377047 COLCA1Q6ZS62 124 aa11.52□□□□□ -0.57
GPC6-201ENST00000377047 GPR82Q96P67 336 aa11.52□□□□□ -0.57
GPC6-201ENST00000377047 NABP2Q9BQ15 211 aa11.52□□□□□ -0.57
GPC6-201ENST00000377047 CD74P04233 296 aa11.52□□□□□ -0.57
GPC6-201ENST00000377047 KLK2P20151 261 aa11.52□□□□□ -0.57
GPC6-201ENST00000377047 MDKP21741 143 aaPredicted RBP11.52□□□□□ -0.57
GPC6-201ENST00000377047 NUTF2P61970 127 aaKnown RBP11.52□□□□□ -0.57
GPC6-201ENST00000377047 CD69Q07108 199 aa11.52□□□□□ -0.57
GPC6-201ENST00000377047 SIGIRRQ6IA17 410 aa11.52□□□□□ -0.57
GPC6-201ENST00000377047 LINC00305Q7Z4B0 112 aa11.52□□□□□ -0.57
GPC6-201ENST00000377047 TP53RKQ96S44 253 aa11.52□□□□□ -0.57
GPC6-201ENST00000377047 MOB4Q9Y3A3 225 aa11.52□□□□□ -0.57
GPC6-201ENST00000377047 E9PLN8 166 aa11.52□□□□□ -0.57
GPC6-201ENST00000377047 TMEM262E9PQX1 116 aa11.52□□□□□ -0.57
GPC6-201ENST00000377047 CEP290O15078 2479 aa11.52□□□□□ -0.57
GPC6-201ENST00000377047 THBDP07204 575 aa11.52□□□□□ -0.57
GPC6-201ENST00000377047 RPS20P60866 119 aaKnown RBP11.52□□□□□ -0.57
GPC6-201ENST00000377047 FBLIM1Q8WUP2 373 aa11.52□□□□□ -0.57
GPC6-201ENST00000377047 VKORC1Q9BQB6 163 aa11.52□□□□□ -0.57
GPC6-201ENST00000377047 FOXA2Q9Y261 457 aaPredicted RBP11.52□□□□□ -0.57
GPC6-201ENST00000377047 ARID1AO14497 2285 aa11.51□□□□□ -0.57
GPC6-201ENST00000377047 M0R143 59 aa11.51□□□□□ -0.57
GPC6-201ENST00000377047 NMUP48645 174 aa11.51□□□□□ -0.57
GPC6-201ENST00000377047 GOLT1AQ6ZVE7 132 aa11.51□□□□□ -0.57
GPC6-201ENST00000377047 SMIM8Q96KF7 97 aa11.51□□□□□ -0.57
GPC6-201ENST00000377047 HSPB1P04792 205 aaKnown RBP11.51□□□□□ -0.57
GPC6-201ENST00000377047 MEF2BQ02080 365 aaPredicted RBP11.51□□□□□ -0.57
GPC6-201ENST00000377047 MRPL20Q9BYC9 149 aaKnown RBP11.51□□□□□ -0.57
GPC6-201ENST00000377047 A0A0B4J293 547 aa11.51□□□□□ -0.57
GPC6-201ENST00000377047 VDAC2P45880 294 aaPredicted RBP11.51□□□□□ -0.57
GPC6-201ENST00000377047 ABLIM2Q6H8Q1 611 aa11.51□□□□□ -0.57
GPC6-201ENST00000377047 ZNF343Q6P1L6 599 aa11.51□□□□□ -0.57
GPC6-201ENST00000377047 ZCCHC24Q8N2G6 241 aaKnown RBP11.51□□□□□ -0.57
GPC6-201ENST00000377047 ZIC4Q8N9L1 334 aa11.51□□□□□ -0.57
GPC6-201ENST00000377047 RAB24Q969Q5 203 aa11.51□□□□□ -0.57
GPC6-201ENST00000377047 LYNX1G3V0Z9 82 aa11.51□□□□□ -0.57
GPC6-201ENST00000377047 LYNX1P0DP58 116 aa11.51□□□□□ -0.57
GPC6-201ENST00000377047 CRYBB3P26998 211 aa11.51□□□□□ -0.57
GPC6-201ENST00000377047 GPR183P32249 361 aa11.51□□□□□ -0.57
GPC6-201ENST00000377047 UCP3P55916 312 aa11.51□□□□□ -0.57
GPC6-201ENST00000377047 PRSS8Q16651 343 aa11.51□□□□□ -0.57
GPC6-201ENST00000377047 CLEC19AQ6UXS0 136 aa11.51□□□□□ -0.57
GPC6-201ENST00000377047 CRIPAKQ8N1N5 446 aa11.51□□□□□ -0.57
GPC6-201ENST00000377047 A0A0G2JMZ2 1700 aa11.51□□□□□ -0.57
GPC6-201ENST00000377047 LRRC37A2A6NM11 1700 aa11.51□□□□□ -0.57
GPC6-201ENST00000377047 F12P00748 615 aaPredicted RBP11.51□□□□□ -0.57
GPC6-201ENST00000377047 OSR1Q8TAX0 266 aaPredicted RBP11.51□□□□□ -0.57
GPC6-201ENST00000377047 ZFP30Q9Y2G7 519 aa11.51□□□□□ -0.57
GPC6-201ENST00000377047 LTBP1Q14766 1721 aa11.5□□□□□ -0.57
GPC6-201ENST00000377047 H3BVH4 76 aa11.5□□□□□ -0.57
GPC6-201ENST00000377047 MEF2CQ06413 473 aaPredicted RBP11.5□□□□□ -0.57
GPC6-201ENST00000377047 CYP2G1PQ6ZSU1 146 aa11.5□□□□□ -0.57
GPC6-201ENST00000377047 SEMA5BQ9P283 1151 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms