RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 UCNP55089 124 aa11.68□□□□□ -0.54
COL4A1-201ENST00000375820 TFF3Q07654 80 aa11.68□□□□□ -0.54
COL4A1-201ENST00000375820 NUDT10Q8NFP7 164 aa11.68□□□□□ -0.54
COL4A1-201ENST00000375820 DEFB104AQ8WTQ1 72 aa11.68□□□□□ -0.54
COL4A1-201ENST00000375820 MRPL16Q9NX20 251 aaKnown RBP11.68□□□□□ -0.54
COL4A1-201ENST00000375820 NHSQ6T4R5 1651 aa11.67□□□□□ -0.54
COL4A1-201ENST00000375820 TRAV12-3A0A0B4J271 114 aa11.67□□□□□ -0.54
COL4A1-201ENST00000375820 TFF1P04155 84 aa11.67□□□□□ -0.54
COL4A1-201ENST00000375820 C11orf44Q8N8P7 122 aa11.67□□□□□ -0.54
COL4A1-201ENST00000375820 FDCSPQ8NFU4 85 aa11.67□□□□□ -0.54
COL4A1-201ENST00000375820 UQCR10Q9UDW1 63 aa11.67□□□□□ -0.54
COL4A1-201ENST00000375820 CD1AP06126 327 aa11.67□□□□□ -0.54
COL4A1-201ENST00000375820 SPSB4Q96A44 273 aa11.67□□□□□ -0.54
COL4A1-201ENST00000375820 TMEM70Q9BUB7 260 aa11.67□□□□□ -0.54
COL4A1-201ENST00000375820 TRPM3Q9HCF6 1732 aaPredicted RBP11.67□□□□□ -0.54
COL4A1-201ENST00000375820 RFPL3SP0C7P2 107 aa11.67□□□□□ -0.54
COL4A1-201ENST00000375820 MYO16Q9Y6X6 1858 aa11.67□□□□□ -0.54
COL4A1-201ENST00000375820 A0A1B0GV90 55 aa11.67□□□□□ -0.54
COL4A1-201ENST00000375820 C7orf66A4D0T2 115 aa11.67□□□□□ -0.54
COL4A1-201ENST00000375820 CGAP01215 116 aa11.67□□□□□ -0.54
COL4A1-201ENST00000375820 TYMSP04818 313 aa11.67□□□□□ -0.54
COL4A1-201ENST00000375820 GATA2P23769 480 aaPredicted RBP11.67□□□□□ -0.54
COL4A1-201ENST00000375820 CLEC19AQ6UXS0 136 aa11.67□□□□□ -0.54
COL4A1-201ENST00000375820 DDA1Q9BW61 102 aa11.67□□□□□ -0.54
COL4A1-201ENST00000375820 A0A1B0GV72 72 aa11.67□□□□□ -0.54
COL4A1-201ENST00000375820 FHL5Q5TD97 284 aa11.67□□□□□ -0.54
COL4A1-201ENST00000375820 ZNF324BQ6AW86 544 aaPredicted RBP11.67□□□□□ -0.54
COL4A1-201ENST00000375820 CHRNA10Q9GZZ6 450 aa11.67□□□□□ -0.54
COL4A1-201ENST00000375820 FOCADQ5VW36 1801 aa11.67□□□□□ -0.54
COL4A1-201ENST00000375820 PIN1P1O15428 100 aa11.66□□□□□ -0.54
COL4A1-201ENST00000375820 LIPFP07098 398 aa11.66□□□□□ -0.54
COL4A1-201ENST00000375820 CD24P25063 80 aa11.66□□□□□ -0.54
COL4A1-201ENST00000375820 GPR183P32249 361 aa11.66□□□□□ -0.54
COL4A1-201ENST00000375820 OR9G1Q8NH87 305 aa11.66□□□□□ -0.54
COL4A1-201ENST00000375820 DNASE2BQ8WZ79 361 aa11.66□□□□□ -0.54
COL4A1-201ENST00000375820 SCARF2Q96GP6 870 aaPredicted RBP11.66□□□□□ -0.54
COL4A1-201ENST00000375820 TNFRSF18Q9Y5U5 241 aa11.66□□□□□ -0.54
COL4A1-201ENST00000375820 RAMP1O60894 148 aa11.66□□□□□ -0.54
COL4A1-201ENST00000375820 MT-ND6P03923 174 aa11.66□□□□□ -0.54
COL4A1-201ENST00000375820 CTAG1AP78358 180 aa11.66□□□□□ -0.54
COL4A1-201ENST00000375820 C12orf54Q6X4T0 127 aa11.66□□□□□ -0.54
COL4A1-201ENST00000375820 TCF24Q7RTU0 167 aa11.66□□□□□ -0.54
COL4A1-201ENST00000375820 LHFPL4Q7Z7J7 247 aa11.66□□□□□ -0.54
COL4A1-201ENST00000375820 SIGLEC12Q96PQ1 595 aa11.66□□□□□ -0.54
COL4A1-201ENST00000375820 G6PC2Q9NQR9 355 aa11.66□□□□□ -0.54
COL4A1-201ENST00000375820 GLI3P10071 1580 aa11.66□□□□□ -0.54
COL4A1-201ENST00000375820 BCORQ6W2J9 1755 aa11.66□□□□□ -0.54
COL4A1-201ENST00000375820 SP9P0CG40 484 aa11.66□□□□□ -0.54
COL4A1-201ENST00000375820 LHX2P50458 406 aa11.66□□□□□ -0.54
COL4A1-201ENST00000375820 RNASEH2CQ8TDP1 164 aaKnown RBP11.66□□□□□ -0.54
COL4A1-201ENST00000375820 GCHFRP30047 84 aa11.66□□□□□ -0.54
COL4A1-201ENST00000375820 OR11H4Q8NGC9 324 aa11.66□□□□□ -0.54
COL4A1-201ENST00000375820 DPH3P1Q9H4G8 78 aa11.66□□□□□ -0.54
COL4A1-201ENST00000375820 MRPS18AQ9NVS2 196 aaKnown RBP11.66□□□□□ -0.54
COL4A1-201ENST00000375820 HOXD4P09016 255 aaPredicted RBP11.66□□□□□ -0.54
COL4A1-201ENST00000375820 TMEM101Q96IK0 257 aa11.66□□□□□ -0.54
COL4A1-201ENST00000375820 AQP10Q96PS8 301 aa11.66□□□□□ -0.54
COL4A1-201ENST00000375820 PMCHL1Q16048 86 aa11.65□□□□□ -0.54
COL4A1-201ENST00000375820 PILRBQ9UKJ0 227 aa11.65□□□□□ -0.54
COL4A1-201ENST00000375820 IGFBP2P18065 325 aa11.65□□□□□ -0.54
COL4A1-201ENST00000375820 TMEM187Q14656 261 aa11.65□□□□□ -0.54
COL4A1-201ENST00000375820 JOSD1Q15040 202 aaPredicted RBP11.65□□□□□ -0.54
COL4A1-201ENST00000375820 FAM71F2Q6NXP2 309 aa11.65□□□□□ -0.54
COL4A1-201ENST00000375820 SAP25Q8TEE9 199 aa11.65□□□□□ -0.54
COL4A1-201ENST00000375820 TRAV30A0A087WSZ9 112 aa11.65□□□□□ -0.54
COL4A1-201ENST00000375820 A0A1W2PQM1 296 aa11.65□□□□□ -0.54
COL4A1-201ENST00000375820 IL6RP08887 468 aaPredicted RBP11.65□□□□□ -0.54
COL4A1-201ENST00000375820 C10orf128Q5T292 105 aa11.65□□□□□ -0.54
COL4A1-201ENST00000375820 TSPOP30536 169 aa11.65□□□□□ -0.54
COL4A1-201ENST00000375820 ASPHD2Q6ICH7 369 aa11.65□□□□□ -0.54
COL4A1-201ENST00000375820 APOMO95445 188 aa11.65□□□□□ -0.55
COL4A1-201ENST00000375820 DDTP30046 118 aa11.65□□□□□ -0.55
COL4A1-201ENST00000375820 C1QL2Q7Z5L3 287 aa11.65□□□□□ -0.55
COL4A1-201ENST00000375820 OR5AN1Q8NGI8 311 aa11.65□□□□□ -0.55
COL4A1-201ENST00000375820 LINC01587Q99440 93 aa11.65□□□□□ -0.55
COL4A1-201ENST00000375820 SCO2A0A1W2PP80 73 aa11.64□□□□□ -0.55
COL4A1-201ENST00000375820 ERVH48-1M5A8F1 160 aa11.64□□□□□ -0.55
COL4A1-201ENST00000375820 GCM2O75603 506 aaPredicted RBP11.64□□□□□ -0.55
COL4A1-201ENST00000375820 SMIM13P0DJ93 91 aa11.64□□□□□ -0.55
COL4A1-201ENST00000375820 CYP2G1PQ6ZSU1 146 aa11.64□□□□□ -0.55
COL4A1-201ENST00000375820 C10orf126Q8N4M7 172 aa11.64□□□□□ -0.55
COL4A1-201ENST00000375820 ABCA3Q99758 1704 aa11.64□□□□□ -0.55
COL4A1-201ENST00000375820 ICE1Q9Y2F5 2266 aa11.64□□□□□ -0.55
COL4A1-201ENST00000375820 FAM216BQ8N7L0 139 aa11.64□□□□□ -0.55
COL4A1-201ENST00000375820 Q96M66 194 aa11.64□□□□□ -0.55
COL4A1-201ENST00000375820 JPT1Q9UK76 154 aa11.64□□□□□ -0.55
COL4A1-201ENST00000375820 UNC13CQ8NB66 2214 aa11.64□□□□□ -0.55
COL4A1-201ENST00000375820 ERGP11308 486 aa11.64□□□□□ -0.55
COL4A1-201ENST00000375820 RPS20P60866 119 aaKnown RBP11.64□□□□□ -0.55
COL4A1-201ENST00000375820 PRR31Q5SQ13 230 aa11.64□□□□□ -0.55
COL4A1-201ENST00000375820 SYNGR3O43761 229 aa11.64□□□□□ -0.55
COL4A1-201ENST00000375820 STARD6P59095 220 aa11.64□□□□□ -0.55
COL4A1-201ENST00000375820 C1orf53Q5VUE5 145 aa11.64□□□□□ -0.55
COL4A1-201ENST00000375820 C11orf68Q9H3H3 251 aaKnown RBP11.64□□□□□ -0.55
COL4A1-201ENST00000375820 APOHP02749 345 aaPredicted RBP11.64□□□□□ -0.55
COL4A1-201ENST00000375820 SRD5A1P18405 259 aa11.64□□□□□ -0.55
COL4A1-201ENST00000375820 CDKN1AP38936 164 aa11.64□□□□□ -0.55
COL4A1-201ENST00000375820 FAM19A2Q8N3H0 131 aa11.64□□□□□ -0.55
COL4A1-201ENST00000375820 FBXL7Q9UJT9 491 aa11.64□□□□□ -0.55
COL4A1-201ENST00000375820 IGKV1D-42A0A075B6H8 117 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms