RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 ID3Q02535 119 aa13.78□□□□□ -0.2
HLA-DMA-201ENST00000374843 FGL1Q08830 312 aa13.78□□□□□ -0.2
HLA-DMA-201ENST00000374843 PSG5Q15238 335 aa13.78□□□□□ -0.2
HLA-DMA-201ENST00000374843 FAM120AOSQ5T036 256 aa13.78□□□□□ -0.2
HLA-DMA-201ENST00000374843 ZNF429Q86V71 674 aa13.78□□□□□ -0.2
HLA-DMA-201ENST00000374843 OR8H1Q8NGG4 311 aa13.78□□□□□ -0.2
HLA-DMA-201ENST00000374843 PIFOQ8TCI5 191 aa13.78□□□□□ -0.2
HLA-DMA-201ENST00000374843 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.78□□□□□ -0.2
HLA-DMA-201ENST00000374843 ZFP57Q9NU63 452 aa13.78□□□□□ -0.2
HLA-DMA-201ENST00000374843 TMEM14BQ9NUH8 114 aa13.78□□□□□ -0.2
HLA-DMA-201ENST00000374843 GSKIPQ9P0R6 139 aa13.78□□□□□ -0.2
HLA-DMA-201ENST00000374843 CACFD1Q9UGQ2 172 aa13.78□□□□□ -0.2
HLA-DMA-201ENST00000374843 SOX21Q9Y651 276 aaPredicted RBP13.78□□□□□ -0.2
HLA-DMA-201ENST00000374843 SVEP1Q4LDE5 3571 aa13.78□□□□□ -0.2
HLA-DMA-201ENST00000374843 MBPP02686 304 aaPredicted RBP13.77□□□□□ -0.21
HLA-DMA-201ENST00000374843 PSMB6P28072 239 aa13.77□□□□□ -0.21
HLA-DMA-201ENST00000374843 NKX2-1P43699 371 aaPredicted RBP13.77□□□□□ -0.21
HLA-DMA-201ENST00000374843 OR1S1Q8NH92 325 aa13.77□□□□□ -0.21
HLA-DMA-201ENST00000374843 PRDM13Q9H4Q3 707 aa13.77□□□□□ -0.21
HLA-DMA-201ENST00000374843 HSPB7Q9UBY9 170 aa13.77□□□□□ -0.21
HLA-DMA-201ENST00000374843 PRNDQ9UKY0 176 aa13.77□□□□□ -0.21
HLA-DMA-201ENST00000374843 RCL1Q9Y2P8 373 aaKnown RBP13.77□□□□□ -0.21
HLA-DMA-201ENST00000374843 POMT1Q9Y6A1 747 aa13.77□□□□□ -0.21
HLA-DMA-201ENST00000374843 TRAV3A0A0B4J244 114 aa13.76□□□□□ -0.21
HLA-DMA-201ENST00000374843 SMLR1H3BR10 107 aa13.76□□□□□ -0.21
HLA-DMA-201ENST00000374843 K7EPK0 472 aa13.76□□□□□ -0.21
HLA-DMA-201ENST00000374843 RRHO14718 337 aa13.76□□□□□ -0.21
HLA-DMA-201ENST00000374843 NBR2O15453 112 aa13.76□□□□□ -0.21
HLA-DMA-201ENST00000374843 SLC25A17O43808 307 aa13.76□□□□□ -0.21
HLA-DMA-201ENST00000374843 MPC2O95563 127 aa13.76□□□□□ -0.21
HLA-DMA-201ENST00000374843 PET100P0DJ07 73 aa13.76□□□□□ -0.21
HLA-DMA-201ENST00000374843 LYL1P12980 280 aa13.76□□□□□ -0.21
HLA-DMA-201ENST00000374843 TMEM11P17152 192 aa13.76□□□□□ -0.21
HLA-DMA-201ENST00000374843 CNTFRP26992 372 aa13.76□□□□□ -0.21
HLA-DMA-201ENST00000374843 RAB32Q13637 225 aa13.76□□□□□ -0.21
HLA-DMA-201ENST00000374843 MRGPRG-AS1Q2M3A8 158 aa13.76□□□□□ -0.21
HLA-DMA-201ENST00000374843 Q5BKY6 102 aa13.76□□□□□ -0.21
HLA-DMA-201ENST00000374843 CXorf66Q5JRM2 361 aaPredicted RBP13.76□□□□□ -0.21
HLA-DMA-201ENST00000374843 FAM71E2Q8N5Q1 922 aa13.76□□□□□ -0.21
HLA-DMA-201ENST00000374843 OR52E5Q8NH55 327 aa13.76□□□□□ -0.21
HLA-DMA-201ENST00000374843 OR4A16Q8NH70 328 aa13.76□□□□□ -0.21
HLA-DMA-201ENST00000374843 C11orf1Q9H5F2 150 aa13.76□□□□□ -0.21
HLA-DMA-201ENST00000374843 YAE1D1Q9NRH1 226 aa13.76□□□□□ -0.21
HLA-DMA-201ENST00000374843 PLSCR3Q9NRY6 295 aa13.76□□□□□ -0.21
HLA-DMA-201ENST00000374843 ZNF257Q9Y2Q1 563 aa13.76□□□□□ -0.21
HLA-DMA-201ENST00000374843 SIGLEC9Q9Y336 463 aa13.76□□□□□ -0.21
HLA-DMA-201ENST00000374843 CSPG4Q6UVK1 2322 aa13.76□□□□□ -0.21
HLA-DMA-201ENST00000374843 ST8SIA3O43173 380 aa13.75□□□□□ -0.21
HLA-DMA-201ENST00000374843 SNAPC5O75971 98 aa13.75□□□□□ -0.21
HLA-DMA-201ENST00000374843 SLC25A4P12235 298 aa13.75□□□□□ -0.21
HLA-DMA-201ENST00000374843 CD24P25063 80 aa13.75□□□□□ -0.21
HLA-DMA-201ENST00000374843 OR2B8PP59922 312 aa13.75□□□□□ -0.21
HLA-DMA-201ENST00000374843 TNFRSF9Q07011 255 aa13.75□□□□□ -0.21
HLA-DMA-201ENST00000374843 HES1Q14469 280 aa13.75□□□□□ -0.21
HLA-DMA-201ENST00000374843 MMDQ15546 238 aa13.75□□□□□ -0.21
HLA-DMA-201ENST00000374843 DEFB112Q30KQ8 113 aa13.75□□□□□ -0.21
HLA-DMA-201ENST00000374843 ZFP69Q49AA0 526 aa13.75□□□□□ -0.21
HLA-DMA-201ENST00000374843 BCL6BQ8N143 479 aaPredicted RBP13.75□□□□□ -0.21
HLA-DMA-201ENST00000374843 QTRT1Q9BXR0 403 aaKnown RBP13.75□□□□□ -0.21
HLA-DMA-201ENST00000374843 TPSG1Q9NRR2 321 aa13.75□□□□□ -0.21
HLA-DMA-201ENST00000374843 TCF19Q9Y242 345 aa13.75□□□□□ -0.21
HLA-DMA-201ENST00000374843 SETXQ7Z333 2677 aaKnown RBP13.75□□□□□ -0.21
HLA-DMA-201ENST00000374843 H0YIZ8 118 aa13.74□□□□□ -0.21
HLA-DMA-201ENST00000374843 DEDDO75618 318 aa13.74□□□□□ -0.21
HLA-DMA-201ENST00000374843 HNF1AP20823 631 aa13.74□□□□□ -0.21
HLA-DMA-201ENST00000374843 F2RL1P55085 397 aa13.74□□□□□ -0.21
HLA-DMA-201ENST00000374843 S100A10P60903 97 aa13.74□□□□□ -0.21
HLA-DMA-201ENST00000374843 RPL8P62917 257 aaKnown RBP13.74□□□□□ -0.21
HLA-DMA-201ENST00000374843 PRSS8Q16651 343 aa13.74□□□□□ -0.21
HLA-DMA-201ENST00000374843 C5orf64Q2M2E5 130 aa13.74□□□□□ -0.21
HLA-DMA-201ENST00000374843 LRRC37A5PQ49AS3 106 aa13.74□□□□□ -0.21
HLA-DMA-201ENST00000374843 C11orf87Q6NUJ2 197 aa13.74□□□□□ -0.21
HLA-DMA-201ENST00000374843 PRSS54Q6PEW0 395 aa13.74□□□□□ -0.21
HLA-DMA-201ENST00000374843 MMD2Q8IY49 270 aa13.74□□□□□ -0.21
HLA-DMA-201ENST00000374843 SSX3Q99909 188 aa13.74□□□□□ -0.21
HLA-DMA-201ENST00000374843 ZNF430Q9H8G1 570 aaPredicted RBP13.74□□□□□ -0.21
HLA-DMA-201ENST00000374843 FKBP11Q9NYL4 201 aa13.74□□□□□ -0.21
HLA-DMA-201ENST00000374843 METTL1Q9UBP6 276 aaKnown RBP13.74□□□□□ -0.21
HLA-DMA-201ENST00000374843 NSG2Q9Y328 171 aa13.74□□□□□ -0.21
HLA-DMA-201ENST00000374843 ACANP16112 2415 aa13.74□□□□□ -0.21
HLA-DMA-201ENST00000374843 TLN2Q9Y4G6 2542 aa13.73□□□□□ -0.21
HLA-DMA-201ENST00000374843 MDFIC2A0A1B0GVS7 189 aa13.73□□□□□ -0.21
HLA-DMA-201ENST00000374843 A6NDX4 124 aa13.73□□□□□ -0.21
HLA-DMA-201ENST00000374843 BOLA2-SMG1P6H3BVE0 249 aa13.73□□□□□ -0.21
HLA-DMA-201ENST00000374843 LY6G6DO95868 133 aa13.73□□□□□ -0.21
HLA-DMA-201ENST00000374843 SCGB1D2O95969 90 aa13.73□□□□□ -0.21
HLA-DMA-201ENST00000374843 CD99P14209 185 aa13.73□□□□□ -0.21
HLA-DMA-201ENST00000374843 MAS1LP35410 378 aa13.73□□□□□ -0.21
HLA-DMA-201ENST00000374843 SPCS3P61009 180 aa13.73□□□□□ -0.21
HLA-DMA-201ENST00000374843 HNF4GQ14541 408 aa13.73□□□□□ -0.21
HLA-DMA-201ENST00000374843 PPP1R27Q86WC6 154 aa13.73□□□□□ -0.21
HLA-DMA-201ENST00000374843 OR11H4Q8NGC9 324 aa13.73□□□□□ -0.21
HLA-DMA-201ENST00000374843 OR5B3Q8NH48 314 aa13.73□□□□□ -0.21
HLA-DMA-201ENST00000374843 ZNF48Q96MX3 618 aaPredicted RBP13.73□□□□□ -0.21
HLA-DMA-201ENST00000374843 RNF126Q9BV68 326 aa13.73□□□□□ -0.21
HLA-DMA-201ENST00000374843 FBXL15Q9H469 300 aa13.73□□□□□ -0.21
HLA-DMA-201ENST00000374843 C1RLQ9NZP8 487 aa13.73□□□□□ -0.21
HLA-DMA-201ENST00000374843 KIAA1456Q9P272 454 aa13.73□□□□□ -0.21
HLA-DMA-201ENST00000374843 MBD2Q9UBB5 411 aa13.73□□□□□ -0.21
HLA-DMA-201ENST00000374843 H3BUX3 64 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 167.4 ms