RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 ID3Q02535 119 aa6.54□□□□□ -1.36
HERC4-202ENST00000373700 Q6ZRM9 215 aa6.54□□□□□ -1.36
HERC4-202ENST00000373700 IL22RA2Q969J5 263 aa6.54□□□□□ -1.36
HERC4-202ENST00000373700 PCGF1Q9BSM1 259 aa6.54□□□□□ -1.36
HERC4-202ENST00000373700 MRPL37Q9BZE1 423 aaKnown RBP6.54□□□□□ -1.36
HERC4-202ENST00000373700 IFT22Q9H7X7 185 aa6.54□□□□□ -1.36
HERC4-202ENST00000373700 CLCF1Q9UBD9 225 aa6.54□□□□□ -1.36
HERC4-202ENST00000373700 USP9XQ93008 2570 aaPredicted RBP6.54□□□□□ -1.36
HERC4-202ENST00000373700 IGKV1-6A0A0C4DH72 117 aa6.54□□□□□ -1.36
HERC4-202ENST00000373700 NAPSAO96009 420 aa6.54□□□□□ -1.36
HERC4-202ENST00000373700 CT45A6P0DMU7 189 aa6.54□□□□□ -1.36
HERC4-202ENST00000373700 CT45A5P0DMU8 189 aa6.54□□□□□ -1.36
HERC4-202ENST00000373700 CT45A7P0DMV0 189 aa6.54□□□□□ -1.36
HERC4-202ENST00000373700 CAMPP49913 170 aa6.54□□□□□ -1.36
HERC4-202ENST00000373700 UBE2L3P68036 154 aaKnown RBP6.54□□□□□ -1.36
HERC4-202ENST00000373700 VMA21Q3ZAQ7 101 aa6.54□□□□□ -1.36
HERC4-202ENST00000373700 NRN1LQ496H8 165 aa6.54□□□□□ -1.36
HERC4-202ENST00000373700 CT45A1Q5HYN5 189 aa6.54□□□□□ -1.36
HERC4-202ENST00000373700 ZNF474Q6S9Z5 364 aaPredicted RBP6.54□□□□□ -1.36
HERC4-202ENST00000373700 WDR82Q6UXN9 313 aa6.54□□□□□ -1.36
HERC4-202ENST00000373700 TGIF2LYQ8IUE0 185 aa6.54□□□□□ -1.36
HERC4-202ENST00000373700 TGIF2LXQ8IUE1 241 aa6.54□□□□□ -1.36
HERC4-202ENST00000373700 SLC24A4Q8NFF2 622 aa6.54□□□□□ -1.36
HERC4-202ENST00000373700 CT45A3Q8NHU0 189 aa6.54□□□□□ -1.36
HERC4-202ENST00000373700 SFXN3Q9BWM7 321 aa6.54□□□□□ -1.36
HERC4-202ENST00000373700 NAT8BQ9UHF3 227 aa6.54□□□□□ -1.36
HERC4-202ENST00000373700 OR51B2Q9Y5P1 312 aa6.54□□□□□ -1.36
HERC4-202ENST00000373700 PPIAL4EA0A075B759 164 aa6.53□□□□□ -1.36
HERC4-202ENST00000373700 PPIAL4DF5H284 164 aa6.53□□□□□ -1.36
HERC4-202ENST00000373700 H3BTX0 84 aa6.53□□□□□ -1.36
HERC4-202ENST00000373700 FCN1O00602 326 aa6.53□□□□□ -1.36
HERC4-202ENST00000373700 PPIAL4FP0DN26 164 aa6.53□□□□□ -1.36
HERC4-202ENST00000373700 GNG4P50150 75 aa6.53□□□□□ -1.36
HERC4-202ENST00000373700 ERVFRD-1P60508 538 aa6.53□□□□□ -1.36
HERC4-202ENST00000373700 KRTDAPP60985 99 aa6.53□□□□□ -1.36
HERC4-202ENST00000373700 PNRC1Q12796 327 aaPredicted RBP6.53□□□□□ -1.36
HERC4-202ENST00000373700 ZNF324BQ6AW86 544 aaPredicted RBP6.53□□□□□ -1.36
HERC4-202ENST00000373700 TEPPQ6URK8 271 aa6.53□□□□□ -1.36
HERC4-202ENST00000373700 LINC00518Q8N0U6 118 aa6.53□□□□□ -1.36
HERC4-202ENST00000373700 OR4D5Q8NGN0 318 aa6.53□□□□□ -1.36
HERC4-202ENST00000373700 OR5B3Q8NH48 314 aa6.53□□□□□ -1.36
HERC4-202ENST00000373700 SGMS2Q8NHU3 365 aa6.53□□□□□ -1.36
HERC4-202ENST00000373700 NEUROG1Q92886 237 aa6.53□□□□□ -1.36
HERC4-202ENST00000373700 FLYWCH2Q96CP2 140 aaKnown RBP6.53□□□□□ -1.36
HERC4-202ENST00000373700 WDR61Q9GZS3 305 aaKnown RBP6.53□□□□□ -1.36
HERC4-202ENST00000373700 GNB4Q9HAV0 340 aa6.53□□□□□ -1.36
HERC4-202ENST00000373700 TNFRSF19Q9NS68 423 aa6.53□□□□□ -1.36
HERC4-202ENST00000373700 PPIAL4AQ9Y536 164 aa6.53□□□□□ -1.36
HERC4-202ENST00000373700 AUP1Q9Y679 476 aa6.53□□□□□ -1.36
HERC4-202ENST00000373700 TRBV23-1A0A0A0MS06 115 aa6.53□□□□□ -1.36
HERC4-202ENST00000373700 PMCHP20382 165 aa6.53□□□□□ -1.36
HERC4-202ENST00000373700 GATA2P23769 480 aaPredicted RBP6.53□□□□□ -1.36
HERC4-202ENST00000373700 OR10J1P30954 320 aa6.53□□□□□ -1.36
HERC4-202ENST00000373700 GLRXP35754 106 aa6.53□□□□□ -1.36
HERC4-202ENST00000373700 RPL30P62888 115 aaKnown RBP6.53□□□□□ -1.36
HERC4-202ENST00000373700 GCSAMLQ5JQS6 135 aa6.53□□□□□ -1.36
HERC4-202ENST00000373700 MRPL54Q6P161 138 aaKnown RBP6.53□□□□□ -1.36
HERC4-202ENST00000373700 OR1B1Q8NGR6 318 aa6.53□□□□□ -1.36
HERC4-202ENST00000373700 MEGF10Q96KG7 1140 aa6.53□□□□□ -1.36
HERC4-202ENST00000373700 MS4A5Q9H3V2 200 aa6.53□□□□□ -1.36
HERC4-202ENST00000373700 TCF19Q9Y242 345 aa6.53□□□□□ -1.36
HERC4-202ENST00000373700 FASNP49327 2511 aaKnown RBP6.53□□□□□ -1.36
HERC4-202ENST00000373700 SRP19P09132 144 aaKnown RBP6.53□□□□□ -1.36
HERC4-202ENST00000373700 PRB4P10163 310 aaPredicted RBP6.53□□□□□ -1.36
HERC4-202ENST00000373700 CFPP27918 469 aa6.53□□□□□ -1.36
HERC4-202ENST00000373700 UCNP55089 124 aa6.53□□□□□ -1.36
HERC4-202ENST00000373700 HABP2Q14520 560 aaPredicted RBP6.53□□□□□ -1.36
HERC4-202ENST00000373700 OR51G1Q8NGK1 321 aa6.53□□□□□ -1.36
HERC4-202ENST00000373700 LSM10Q969L4 123 aaKnown RBP6.53□□□□□ -1.36
HERC4-202ENST00000373700 TMEM18Q96B42 140 aa6.53□□□□□ -1.36
HERC4-202ENST00000373700 SIRT7Q9NRC8 400 aa6.53□□□□□ -1.36
HERC4-202ENST00000373700 DSPP15924 2871 aaKnown RBP6.52□□□□□ -1.37
HERC4-202ENST00000373700 K7N7A8 449 aa6.52□□□□□ -1.37
HERC4-202ENST00000373700 SLC25A17O43808 307 aa6.52□□□□□ -1.37
HERC4-202ENST00000373700 SLC35E4Q6ICL7 350 aa6.52□□□□□ -1.37
HERC4-202ENST00000373700 ZNF497Q6ZNH5 498 aa6.52□□□□□ -1.37
HERC4-202ENST00000373700 Q6ZS92 163 aa6.52□□□□□ -1.37
HERC4-202ENST00000373700 ZNF525Q8N782 197 aa6.52□□□□□ -1.37
HERC4-202ENST00000373700 NHLRC2Q8NBF2 726 aa6.52□□□□□ -1.37
HERC4-202ENST00000373700 OR10G8Q8NGN5 311 aa6.52□□□□□ -1.37
HERC4-202ENST00000373700 GATAD1Q8WUU5 269 aa6.52□□□□□ -1.37
HERC4-202ENST00000373700 SPSB4Q96A44 273 aa6.52□□□□□ -1.37
HERC4-202ENST00000373700 DCAF16Q9NXF7 216 aa6.52□□□□□ -1.37
HERC4-202ENST00000373700 A0A0G2JNJ9 132 aa6.52□□□□□ -1.37
HERC4-202ENST00000373700 TM4SF5O14894 197 aa6.52□□□□□ -1.37
HERC4-202ENST00000373700 TMEM50AO95807 157 aa6.52□□□□□ -1.37
HERC4-202ENST00000373700 IGKV1-5P01602 117 aa6.52□□□□□ -1.37
HERC4-202ENST00000373700 ARL14EPLP0DKL9 152 aa6.52□□□□□ -1.37
HERC4-202ENST00000373700 CCL3L1P16619 93 aa6.52□□□□□ -1.37
HERC4-202ENST00000373700 SPCS3P61009 180 aa6.52□□□□□ -1.37
HERC4-202ENST00000373700 RANP62826 216 aaKnown RBP6.52□□□□□ -1.37
HERC4-202ENST00000373700 FOXL2NBQ6ZUU3 175 aa6.52□□□□□ -1.37
HERC4-202ENST00000373700 SPRY4Q9C004 299 aa6.52□□□□□ -1.37
HERC4-202ENST00000373700 PARLQ9H300 379 aa6.52□□□□□ -1.37
HERC4-202ENST00000373700 NPVFQ9HCQ7 196 aa6.52□□□□□ -1.37
HERC4-202ENST00000373700 Q9UFV3 132 aa6.52□□□□□ -1.37
HERC4-202ENST00000373700 HILPDAQ9Y5L2 63 aa6.52□□□□□ -1.37
HERC4-202ENST00000373700 INSIG2Q9Y5U4 225 aa6.52□□□□□ -1.37
HERC4-202ENST00000373700 HIVEP3Q5T1R4 2406 aa6.52□□□□□ -1.37
HERC4-202ENST00000373700 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms