RNA–Protein interactions for RNA: ENST00000372409.7

PCIF1-201, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCIF1, Length 2,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-201ENST00000372409 TMEM140Q9NV12 185 aa13.84□□□□□ -0.19
PCIF1-201ENST00000372409 CEP250Q9BV73 2442 aa13.84□□□□□ -0.19
PCIF1-201ENST00000372409 KALRNO60229 2985 aa13.83□□□□□ -0.19
PCIF1-201ENST00000372409 SLC31A2O15432 143 aa13.83□□□□□ -0.2
PCIF1-201ENST00000372409 SPRY3O43610 288 aa13.83□□□□□ -0.2
PCIF1-201ENST00000372409 PDE6DO43924 150 aa13.83□□□□□ -0.2
PCIF1-201ENST00000372409 AMBPP02760 352 aa13.83□□□□□ -0.2
PCIF1-201ENST00000372409 ARL14EPLP0DKL9 152 aa13.83□□□□□ -0.2
PCIF1-201ENST00000372409 SELLP14151 372 aa13.83□□□□□ -0.2
PCIF1-201ENST00000372409 FAM201AQ5SY85 155 aa13.83□□□□□ -0.2
PCIF1-201ENST00000372409 UTF1Q5T230 341 aa13.83□□□□□ -0.2
PCIF1-201ENST00000372409 SSMEM1Q8WWF3 244 aa13.83□□□□□ -0.2
PCIF1-201ENST00000372409 DIRC2Q96SL1 478 aa13.83□□□□□ -0.2
PCIF1-201ENST00000372409 PXMP4Q9Y6I8 212 aa13.83□□□□□ -0.2
PCIF1-201ENST00000372409 GATCO43716 136 aaKnown RBP13.83□□□□□ -0.2
PCIF1-201ENST00000372409 YPEL1O60688 119 aa13.83□□□□□ -0.2
PCIF1-201ENST00000372409 LINC01551Q86U37 167 aa13.83□□□□□ -0.2
PCIF1-201ENST00000372409 YPEL2Q96QA6 119 aa13.83□□□□□ -0.2
PCIF1-201ENST00000372409 MGST2Q99735 147 aa13.83□□□□□ -0.2
PCIF1-201ENST00000372409 TET2Q6N021 2002 aaPredicted RBP13.83□□□□□ -0.2
PCIF1-201ENST00000372409 SOX15O60248 233 aa13.82□□□□□ -0.2
PCIF1-201ENST00000372409 DEFB109BQ30KR1 87 aa13.82□□□□□ -0.2
PCIF1-201ENST00000372409 IFI27L2Q9H2X8 130 aa13.82□□□□□ -0.2
PCIF1-201ENST00000372409 SPAARA0A1B0GVQ0 90 aa13.82□□□□□ -0.2
PCIF1-201ENST00000372409 GFRA3O60609 400 aa13.82□□□□□ -0.2
PCIF1-201ENST00000372409 HNF1AP20823 631 aa13.82□□□□□ -0.2
PCIF1-201ENST00000372409 SRP14P37108 136 aaKnown RBP13.82□□□□□ -0.2
PCIF1-201ENST00000372409 LOXL3P58215 753 aa13.82□□□□□ -0.2
PCIF1-201ENST00000372409 RELBQ01201 579 aa13.82□□□□□ -0.2
PCIF1-201ENST00000372409 PRSS8Q16651 343 aa13.82□□□□□ -0.2
PCIF1-201ENST00000372409 FAM90A1Q86YD7 464 aa13.82□□□□□ -0.2
PCIF1-201ENST00000372409 DEFB124Q8NES8 71 aa13.82□□□□□ -0.2
PCIF1-201ENST00000372409 CALYQ9NYX4 217 aa13.82□□□□□ -0.2
PCIF1-201ENST00000372409 DKK4Q9UBT3 224 aa13.82□□□□□ -0.2
PCIF1-201ENST00000372409 ICE1Q9Y2F5 2266 aa13.82□□□□□ -0.2
PCIF1-201ENST00000372409 MPDU1O75352 247 aa13.81□□□□□ -0.2
PCIF1-201ENST00000372409 C1QTNF9P0C862 333 aa13.81□□□□□ -0.2
PCIF1-201ENST00000372409 OPRK1P41145 380 aa13.81□□□□□ -0.2
PCIF1-201ENST00000372409 VDAC2P45880 294 aaPredicted RBP13.81□□□□□ -0.2
PCIF1-201ENST00000372409 TMEM170AQ8WVE7 144 aa13.81□□□□□ -0.2
PCIF1-201ENST00000372409 GGTLC1Q9BX51 225 aa13.81□□□□□ -0.2
PCIF1-201ENST00000372409 HINT2Q9BX68 163 aa13.81□□□□□ -0.2
PCIF1-201ENST00000372409 KCNIP2Q9NS61 270 aa13.81□□□□□ -0.2
PCIF1-201ENST00000372409 TCF19Q9Y242 345 aa13.81□□□□□ -0.2
PCIF1-201ENST00000372409 SLC25A15Q9Y619 301 aa13.81□□□□□ -0.2
PCIF1-201ENST00000372409 TSTD3H0UI37 97 aa13.81□□□□□ -0.2
PCIF1-201ENST00000372409 GGCTO75223 188 aaKnown RBP13.81□□□□□ -0.2
PCIF1-201ENST00000372409 GPX4P36969 197 aaPredicted RBP13.81□□□□□ -0.2
PCIF1-201ENST00000372409 C1orf229Q6ZS94 237 aaPredicted RBP13.81□□□□□ -0.2
PCIF1-201ENST00000372409 ZNF114Q8NC26 417 aa13.81□□□□□ -0.2
PCIF1-201ENST00000372409 A0A0U1RQK1 487 aa13.8□□□□□ -0.2
PCIF1-201ENST00000372409 ZNF320A2RRD8 509 aa13.8□□□□□ -0.2
PCIF1-201ENST00000372409 AHRRA9YTQ3 701 aa13.8□□□□□ -0.2
PCIF1-201ENST00000372409 NUBP1P53384 320 aa13.8□□□□□ -0.2
PCIF1-201ENST00000372409 PAX5Q02548 391 aa13.8□□□□□ -0.2
PCIF1-201ENST00000372409 ITLN1Q8WWA0 313 aa13.8□□□□□ -0.2
PCIF1-201ENST00000372409 RAB1CQ92928 201 aa13.8□□□□□ -0.2
PCIF1-201ENST00000372409 AKAP13Q12802 2813 aa13.8□□□□□ -0.2
PCIF1-201ENST00000372409 FAM90A9PA6NNJ1 464 aa13.8□□□□□ -0.2
PCIF1-201ENST00000372409 PKIAP61925 76 aa13.8□□□□□ -0.2
PCIF1-201ENST00000372409 ACTL10Q5JWF8 245 aa13.8□□□□□ -0.2
PCIF1-201ENST00000372409 LINC00469Q8N7U9 141 aa13.8□□□□□ -0.2
PCIF1-201ENST00000372409 OR4S2Q8NH73 311 aa13.8□□□□□ -0.2
PCIF1-201ENST00000372409 CGAP01215 116 aa13.79□□□□□ -0.2
PCIF1-201ENST00000372409 KLF3P57682 345 aaPredicted RBP13.79□□□□□ -0.2
PCIF1-201ENST00000372409 AARDQ4LEZ3 155 aa13.79□□□□□ -0.2
PCIF1-201ENST00000372409 OR52E5Q8NH55 327 aa13.79□□□□□ -0.2
PCIF1-201ENST00000372409 ZNF705GA8MUZ8 300 aaPredicted RBP13.79□□□□□ -0.2
PCIF1-201ENST00000372409 F6UZH7 168 aa13.79□□□□□ -0.2
PCIF1-201ENST00000372409 F2RL2O00254 374 aa13.79□□□□□ -0.2
PCIF1-201ENST00000372409 NDUFS6O75380 124 aaKnown RBP13.79□□□□□ -0.2
PCIF1-201ENST00000372409 IL3RAP26951 378 aa13.79□□□□□ -0.2
PCIF1-201ENST00000372409 IGFL2Q6UWQ7 119 aa13.79□□□□□ -0.2
PCIF1-201ENST00000372409 CISD2Q8N5K1 135 aaKnown RBP13.79□□□□□ -0.2
PCIF1-201ENST00000372409 DEFB108BQ8NET1 73 aa13.79□□□□□ -0.2
PCIF1-201ENST00000372409 ACY3Q96HD9 319 aa13.79□□□□□ -0.2
PCIF1-201ENST00000372409 RIF1Q5UIP0 2472 aaKnown RBP13.78□□□□□ -0.2
PCIF1-201ENST00000372409 SCO2A0A1W2PP80 73 aa13.78□□□□□ -0.2
PCIF1-201ENST00000372409 RBFOX2O43251 390 aaKnown RBP eCLIP13.78□□□□□ -0.2
PCIF1-201ENST00000372409 CXorf1O96002 111 aa13.78□□□□□ -0.2
PCIF1-201ENST00000372409 FTH1P19P0C7X4 201 aa13.78□□□□□ -0.2
PCIF1-201ENST00000372409 COL8A2P25067 703 aa13.78□□□□□ -0.2
PCIF1-201ENST00000372409 JOSD1Q15040 202 aaPredicted RBP13.78□□□□□ -0.2
PCIF1-201ENST00000372409 DUX4L9Q6RFH8 374 aaPredicted RBP13.78□□□□□ -0.2
PCIF1-201ENST00000372409 SEM1Q6ZVN7 128 aa13.78□□□□□ -0.2
PCIF1-201ENST00000372409 LYG1Q8N1E2 194 aa13.78□□□□□ -0.2
PCIF1-201ENST00000372409 SAA2-SAA4A0A096LPE2 208 aa13.78□□□□□ -0.2
PCIF1-201ENST00000372409 MDFIC2A0A1B0GVS7 189 aa13.78□□□□□ -0.2
PCIF1-201ENST00000372409 PRSS46E5RG02 174 aa13.78□□□□□ -0.2
PCIF1-201ENST00000372409 DVL1O14640 695 aa13.78□□□□□ -0.2
PCIF1-201ENST00000372409 STAG3L2P0CL84 134 aa13.78□□□□□ -0.2
PCIF1-201ENST00000372409 STAG3L3P0CL85 134 aa13.78□□□□□ -0.2
PCIF1-201ENST00000372409 SAA2P0DJI9 122 aaPredicted RBP13.78□□□□□ -0.2
PCIF1-201ENST00000372409 GZMBP10144 247 aa13.78□□□□□ -0.2
PCIF1-201ENST00000372409 GNG10P50151 68 aa13.78□□□□□ -0.2
PCIF1-201ENST00000372409 CT45A1Q5HYN5 189 aa13.78□□□□□ -0.2
PCIF1-201ENST00000372409 UNQ6494/PRO21346Q6UXR6 183 aa13.78□□□□□ -0.2
PCIF1-201ENST00000372409 C1orf174Q8IYL3 243 aa13.78□□□□□ -0.2
PCIF1-201ENST00000372409 CT45A3Q8NHU0 189 aa13.78□□□□□ -0.2
PCIF1-201ENST00000372409 C14orf144Q96I85 54 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms